Canis lupus dingo (dingo): 112642331
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Entry
112642331 CDS
T08371
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03015
mRNA surveillance pathway
clud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112642331 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
112642331 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112642331 (PABPC4)
03041 Spliceosome [BR:
clud03041
]
112642331 (PABPC4)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112642331 (PABPC4)
mRNA cycle factors
Stress granule specific factors
112642331 (PABPC4)
Spliceosome [BR:
clud03041
]
Complex C
Other components
Complex C specific factors
112642331 (PABPC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_5
RRM_ACIN1
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
112642331
NCBI-ProteinID:
XP_025275614
Ensembl:
ENSCAFG00020004161
UniProt:
A0A8C0JV82
LinkDB
All DBs
Position
15:3339757..3355088
Genome browser
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDGCQSGGVPTAVQTLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggctatgcctacgtcaacttccag
cagccggccgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgtaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gctgagcttggagccaaagccaaagagttcaccaatgtctatatcaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctctttagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaag
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgtgcacagaagaaagtggagcggcaggcggagttaaagcggaaattt
gaacagttgaaacaagagagaattagtcggtatcagggggtgaatctctacattaagaac
ttggatgacaccattgatgatgagaagttaaggaaagagttttctccttttggatcaatc
accagtgcaaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcagtcactgagatgaatggacgcatcgtgggctcc
aagccactgtatgtcgccttggcgcagaggaaggaagagagaaaagctcatctgaccaac
cagtatatgcagcgggtggctggaatgagagcgctccctgccaatgccatcttaaatcag
ttccagcctgcagctggtggttactttgtgccagcagttccacaggctcagggaagacct
ccatactacacccctaaccagttagcacagatgaggccaaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
gctcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggc
gccgcccagcaagggctgactgacggctgccagtctggaggtgtgcccacagccgtgcag
accttagcacctcgtgctgctgtcgccgctgctgcccctcgggctgtcgcaccttacaaa
tatgcctccagtgtccgcagccctcaccccgccatccagcctttgcaggccccccagcct
gccgtccatgtacaggggcaggagcccctgaccgcctccatgctggctgcagcacccccc
caggagcagaagcagatgctgggagaacgtttgttcccactcatccaaaccatgcattca
aacctggctggaaaaatcacaggcatgctgctggagatcgacaactctgagctgctgcac
atgctggagtcccctgagtctctccgctccaaggtggatgaagctgtggcggttctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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