Canis lupus dingo (dingo): 112642991
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Entry
112642991 CDS
T08371
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clud04131
]
112642991 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clud04147
]
112642991 (COPA)
Membrane trafficking [BR:
clud04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112642991 (COPA)
Exosome [BR:
clud04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112642991 (COPA)
Exosomal proteins of bladder cancer cells
112642991 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
112642991
NCBI-ProteinID:
XP_025276542
Ensembl:
ENSCAFG00020020033
LinkDB
All DBs
Position
38:22494937..22537533
Genome browser
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPAQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPHRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICKVTTVTEIGRDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactaccggatg
tgtacccttattgacaagtttgatgaacatgatggtccagtacgagggattgacttccat
aagcagcagccattgtttgtctctggaggagatgactataagattaaggtgtggaattac
aagctgcggcgctgtctcttcacattgcttgggcatttagactacattcgcaccacattt
tttcatcatgaatatccctggattctgagcgcctcggatgatcagaccatcagggtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacgggacacaaccattatgtaatgtgt
gctcagtttcacccctcggaagacctggttgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcagtggagtccgac
gtgagaggaataactggggttgatctatttggaacgacagatgcagtggtgaagcacgtg
ctggagggtcatgatcgtggagtaaactgggctgcctttcacccgactatgccccttatt
gtctctggagcagatgaccgtcaggtgaagatctggcgcatgaatgagtcaaaggcgtgg
gaggttgacacctgccgtggtcattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagctgatcctcagcaattctgaggacaagagtatccgagtctgggatatgtccaag
cggactggggttcagaccttccgcagggaccacgatcgtttctgggtcctggctgcccac
cctaatctgaacctttttgcggcaggccatgatggtggcatgatcgtgtttaaactagaa
cgggaacggccagcctatgctgttcatggcaatatgctacattatgtcaaagaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcaatatgtcatacaatccagcagaaaatgcagtcctattgtgt
acgagagccagcaatttagagaacagtacctatgacctgtacaccatccccaaggatgca
gactcacagaatcctgatgctcctgaagggaaacgatcttcaggcctgacagccgtttgg
gttgctagaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttttacgctggc
acaggcaatctcctacttcgagacgcagaatccatcacgctgtttgatgtacaacagaag
cgaactctggcctctgtgaagatttccaaggtgaaatatgttatctggtctgcagacatg
tcccatgtagcactactggccaaacatgagcactcatgccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctgtgtaacattcatgagaacattcgcgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gccgtcaccaccggggactatggaatcatccgaaccctggatttaccaatctatgttacg
cgggtgaagggcaacaatgtgtattgcctggaccgggaatgtcgtcctcgagtgctcacc
attgatcccactgagttcaagttcaagctggccctgatcaacagaaaatatgatgaggta
ctgcacatggtgaggaatgccaaactagtaggccagtctatcattgcttacctgcagaag
aagggctacccggaagtggcactgcatttcgtcaaggatgagaaaactcgctttagtctg
gcactcgaatgtggaaatattgagattgctctggaagcagccaaagcactggatgacaag
aactgctgggaaaagctaggagaagtggccttgctacaggggaaccaccagattgtagaa
atgtgttatcagcgcaccaagaactttgacaaactttctttcttgtacctcatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgaaatccgaaaggacatgagtggc
cattatcagaacgccctctacctgggggacgtgtctgagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcctatctcacagctgccactcacggcttagatgaagaagct
gagagcctgaaggagacatttgacccagagaaagagacgatcccagacattgatcctaat
gccaagctgctccagccacctgcacctatcatgccattggataccaattggcccttactg
actgtatctaaaggcttctttgaaggctccattgccagcaagggcaagggaggagcactg
gcagctgacattgacatagacactgttggcaccgagggttggggagaggatgcagagctg
cagctggatgaagacgggtttgtggaagctacagaaggtctgggggacgatgctcttggc
aagggacaggaagaaggaggcggctgggatgtcgaagaggacctggagctccctcctgag
ctggatataccccctggggcagctgggggtgctgaggatgggttctttgtaccccccacc
aagggaaccagcccagctcagatctggtgcaataactctcagcttccagttgatcacatc
ctggcaggctcctttgaaacagccatgcggcttcttcacgaccaggtgggggtgacccag
ttcggcccctacaagcaactgttcctgcagacatatgcccgcggccgtaccacctatcag
gccctgccctgcctgccctccatgtatggctatcctcatcgcaattggaaggatgcaggc
ctgaagaatggtgtgccggctgtgggcctgaagcttaacgacctcattcagcgactgcag
ctctgctaccagctcaccacggtcggcaagtttgaggaggctgtggaaaagttccgttcc
attcttctcagcgtgcctcttcttgttgtggacaacaaacaggaaattgcagaggcccag
cagctcatcaccatctgccgtgagtacatcgtgggtttgtgcatggagatagaaaggaag
aagctgcccaaggagactctggaacagcagaagcgcatctgtgagatggcggcctatttc
acccactcaaacctgcagcctgtgcacatgatcctggtgctgcgtacggccctcaacctc
ttcttcaagctcaagaactttaagacagctgccacctttgctcggcgcctattggaactg
gggcccaagccagaggtggctcaacagacccgcaaaattctgtctgcctgtgagaagaac
cccacggatgcctaccagctcaattatgacatgcacaacccttttgacatctgtgctgca
tcctaccggcccatctaccgtggaaagccagtagagaaatgtccgctcagcggggcctgc
tattcccctgagttcaagggtcaaatctgcaaggtcactacagtgacagagattggcaga
gacgtcattggtttaaggatcagccctttgcagttccgttga
DBGET
integrated database retrieval system
