Canis lupus dingo (dingo): 112644345
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Entry
112644345 CDS
T08371
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X4
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03082
ATP-dependent chromatin remodeling
clud04714
Thermogenesis
clud05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112644345 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112644345 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112644345 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112644345 (ARID1B)
03021 Transcription machinery [BR:
clud03021
]
112644345 (ARID1B)
03036 Chromosome and associated proteins [BR:
clud03036
]
112644345 (ARID1B)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Helix-turn-helix
ARID
112644345 (ARID1B)
Transcription machinery [BR:
clud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112644345 (ARID1B)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112644345 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
TFIIA
Motif
Other DBs
NCBI-GeneID:
112644345
NCBI-ProteinID:
XP_025278395
Ensembl:
ENSCAFG00020015368
LinkDB
All DBs
Position
1:46361812..46796655
Genome browser
AA seq
2430 aa
AA seq
DB search
MAARAAAAAAAAAAAAARARTGSGERRAPPGPRPAPGARDLEAGARGAAAAAAAAAPGPM
LGGGGDGGGLHSVHHHPLHPRHDLNMAHNASTAAAAASSHSAKSGGSEAALKEGGSAAAL
SSSSSAAAAAAAAAAAASSSSSSSGPGSAMETGLLPNHKLKTVGEAPAAAPHQQHHHHHH
AHHHHHHAHHLHHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGG
GAAQPGPDMEQPQHGGAKDSAAGSQADPPGQPLLSKPGDEDDAPPKMGEPAGGRFEHPGL
GALGAQQPPIAVPGGGGGGGGGSGGGGGGGSGGGGGGGPAAVSEFNNYYGSAAPASGGPG
GRTGPCFDQHGGQQSPGMGMMHSAPAAAGAPNSMDPLQNSHEGYPNSQYNHYPGYSRPSA
GGGGGGGGGGGGGGGSGGGGGGGGGGGGAGAGAVAAAAAAAAAAAGGGGGGGGGGYGGSS
SGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQNQHPSGATPTLNQL
LTSPSPMMRSYGGSYPDYSSPSAPPPPPPSQPQSQAAAAAAAAAAAAGAAAGGQQAAAGM
GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPAMGRSQGSPMDPMVMKRPQLYGMGS
NPHSQPQQSSPYPGGSYGPPGPQRYPISIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGYC
QQGQQPYYNQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED
LNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQ
SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQ
SESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQ
QSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANNQMHGQGPSQPCG
AMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQA
AANSAQSRQGSFPGMNQSGLMASSSPYSQPVNNSSGLMNTQAPPYSMTPNMVNSSAASMG
LADMMSPGESKLPMPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSS
ASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTF
MEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAAS
SLKKQYIQYLFAFECKIERGEEPPPEVFSTVDTKKQPKLQPPSPANSGSLQGPQTPQSTG
SNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASDSSFPKRNSMTPSTP
YQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPASSMQDMYNQSPSGAMS
SLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM
YGPPAKRHEGDMYNMQYGNQQQEMYNQYGSSYSGPDRRPIQGQYPYPYNRERMQGPGQIQ
PHGIPPQMMGGPMQSSSSEGPQQSMWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDM
MVPDQRINHESQWPSHVSQRQPYMSSPASMQPITRPPQSSYQTPPSLPNHISRAPSPASF
QRSLESRMSPSKSPFLPSLKMQKVLPTVPTPQVTGPPPQPPPIRREITFPPGSVEASQPV
LKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFSLSQLSGF
LELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAVKRDDGQSSADDSGKEEDDTECVD
EEDEEDEDEDEEDSGKPETERSSVTLASPTAPADPKEKPRQASKFDKLPIKIVKKNNLFV
VDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPALSSAGRKREQ
EGRGEAEEQQEKSIIATIDDVLSARPGALPEDANPGTQTESGKFPFGIHQAKSHRNIKLL
EDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLI
LLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSA
YTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLI
LATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNL
ISFLEDGVTMAQYQQSQHNLLHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHE
GRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcggcggcggcggcggcggcgcgggcgcgg
acgggcagcggcgagcggcgggcgccccccgggccgcggccggcgcccggggcccgggac
ctggaggcgggggcgcgcggcgcggcggcggcggcggcggcggcggcaccgggacccatg
ctggggggcggcggcgacggcggcggcctgcatagtgtgcaccaccaccccctgcacccc
cgtcacgacctgaacatggcccataacgcgagcacggcggccgccgccgccagctctcac
agcgccaagagcggcggctccgaggcggctctcaaggagggtggaagcgccgccgcgctg
tcctcctcctcctccgcggcggcggcggcggcggcggcggcggcggcggcgtcctcctct
tcctcctcgtcgggcccgggctcggccatggagacggggctgctccccaaccacaaactg
aaaaccgttggcgaagcccccgccgcagcgccccaccagcagcaccaccaccaccaccat
gcccaccaccaccaccaccatgcccaccacctccaccaccaccaccacgcactacagcag
cagctaaaccagttccagcagcagcagcagcagcagcaacagcagcagcagcaacagcag
cagcagcagcagcagcaacatcccatttccaacaacaacagcctcggcggcgcgggcggc
ggcgcggctcagcccggtcccgacatggagcagccgcaacatggaggcgccaaggacagt
gccgcgggcagccaggccgaccccccgggccagcctctgctgagcaagccgggcgacgag
gacgacgcgccgcccaagatgggggagccggcgggcggccggttcgagcacccgggcctg
ggcgccctgggcgcgcagcagccgccgatcgccgtgcccgggggcggcggcggcggcggc
ggcggcagcggcggcggcggcggcggcggcagcggcggcggcggcggtggcggccccgcg
gccgtctcggagtttaataattactatggcagcgctgcccctgctagcggcggccccggc
ggccgcactgggccttgctttgatcaacatggcggacaacaaagccccgggatggggatg
atgcattccgccccagccgccgccggagcccccaacagcatggaccccctgcagaactcc
cacgaagggtaccccaacagccagtacaaccattatccgggctacagccggcccagcgcg
ggcggcggcggcggcggcggcggcggcggaggaggaggaggaggcagcggaggaggagga
ggaggaggaggaggaggaggaggagcaggagcgggagctgtggcggcggcggccgcggcg
gcggcagcagcagcaggaggcggcggcggcggcggcggcggcggctatgggggctcgtcc
tcggggtacggggtgctgagctccccccggcagcagggcggcggcatgatgatgggcccc
gggggcggcggggccgcgagcctcagcaaggcggccgccggcgcggcggctgggggcttc
cagcgcttcgccgggcagaaccagcacccgtcgggggccaccccgaccctcaaccagctg
ctcacctcgcccagccccatgatgaggagctacggcggcagctaccccgactacagcagc
cccagcgcgccgccgccgccgccgccgtcgcagccccagtcccaggcggcggcggcggcg
gcggcggcggcggcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatg
ggcttgggcaaggacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcg
caacaaaggagccacccggcgatgagccccggcacccccggcccggccatgggcagatcc
cagggcagcccaatggatcctatggtgatgaagagacctcagttgtatgggatgggcagt
aaccctcattctcagcctcagcaaagcagcccttacccaggaggctcttacggcccacca
ggcccacaacggtatccaatcagcatccagggtcggaccccaggggccatgggaggaatg
cagtacccacagcagcagatgccacctcagtatggacagcaaggtgtgagtggttactgc
cagcagggccagcagccttactacaaccagcagccacagcctccacatctccctccgcag
gcccagtacctgccatcccagtcccagcaaaggtaccagccacagcaggacatgtctcag
gaaggctatggaactaggtctcaacctcctttggctcctggaaaacctaaccatgaagac
ttgaacttaatacaacaagaaagaccatcaagtttaccagttgaagtcttgacctcggag
gataccgcctttggactcaaggacctgtctggctccatcgatgacctccccacaggaaca
gaggccaccctgagctcagcagtcagtgcatcggggtccacgagcagccaaggggatcaa
agcaacccggctcagtcacctttctctccacacgcatccccccatctctccagcatccct
gggggcccatcgccttctcctgttggctctcctgtgggaagtaaccagtcacgatctggc
ccgatttctcctgcaagtattccaggcagtcagatgcctcctcagccacctgggagccag
tcagaatccagttcccatcctgccttgagccagtcaccaatgccacaggaaagaggtttt
atggcaggcacacaaagaaaccctcagatgtctcagtatggacctcaacagacaggacca
tccatgtcgcctcatccttctcctggaggccagatgcatcctggaatcagtagctttcag
cagagtaactcaagtgggacttatggtccacagatgagccagtatggaccacaaggtaac
tactccagacccccaacgtatagcggggtgcccagtgcaagctacagcggcccagggccc
ggcatgggcatcaatgccaacaaccagatgcatggacaggggccaagccagccatgtggt
gcgatgcccctgggacgaatgccatcagctgggatgcagaacagaccatttcctggaaat
atgagcagcatgacccccagttcccctggcatgtctcagcagggagggccaggaatgggg
ccaccgatgccgaccgtgaaccgtaaggcacaggaggcagccgccgcagtgatgcaggcc
gctgcaaactcggcgcagagcaggcaaggcagttttcccggcatgaatcagagtggactt
atggcttccagctctccctacagccagcctgtgaacaacagctctgggctgatgaatacc
caggcacccccctacagcatgacgcccaatatggtgaacagctcagcagcatctatgggt
cttgcagatatgatgtctcccggggaatccaaattgcccatgcctctcaaagccgacggt
aaagaagaaggcgctccgcagcctgagagcaagtcgaaggatagctacagctctcagggt
atttctcagcccccaacccccggcaacctgccagtcccttccccaatgtcccccagctct
gctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggcca
aagactccatcaagccctaagtccagctcatccaccactactggggaaaagatcacaaag
gtgtatgagttggggaatgagccagagcggaagctatgggtcgacagataccttaccttc
atggaagagcgaggctcccctgtctcaagtctgcctgcagtgggcaagaagcccttggac
ctgttccggctctatgtctgcgtcaaagagattggaggtttggcacaggttaataaaaac
aagaagtggcgtgagctggcaaccaacctaaatgttggcacttcaagcagtgcagcgagc
tccctgaaaaagcagtatattcagtacctgtttgcctttgagtgcaagatcgagcgcggg
gaggagcccccgccggaagtctttagcaccgtggacaccaagaagcagcccaagctccag
ccgccctctcctgctaactcaggatccttgcaaggtccacagaccccccagtcaactggc
agtaactcaatggcagaggttccaggtgacctgaagccaccgaccccagcctccacccct
cacggacagatgaccccgatgcaaggtggaagaagcagtacagtcagtgtgcacgaccca
ttctcagatgccagtgattcatcattcccaaaacggaactccatgactccaagcacccca
taccagcagggcatgagcatgcctgatgtgatgggaaggatgccctatgaacccaacaaa
gacccctttggtggaatgagaaaagtgcctggaagcagtgagcccttcatgactcaagga
cagatgcccgctagcagtatgcaggacatgtataaccaaagtccttctggcgcgatgtcc
agcctgggcatggggcagcggcagcagtttccctacggagccagttatgatcgaaggcat
gaaccttatgggcagcagtacccaggccaaggccctccctcaggacagccgccatatgga
ggacaccagcccggcctgtatccacagcagccgaattacaaacgccatatggacggcatg
tatgggcctccagccaaacgccacgagggagacatgtacaacatgcagtatggcaaccaa
cagcaagagatgtataaccagtatgggagctcttactccggaccagacaggaggcccatc
cagggacagtatccatacccctacaacagagagaggatgcagggccccgggcaaatacag
ccccacgggatcccgcctcagatgatgggtggcccgatgcagtcgtcctccagcgagggg
cctcagcagagcatgtgggcgacacgcaacgatatgccttatccctaccagaacaggcaa
ggccccggcggccccgcccaggcacctccttatccaggcatgaaccgcacggatgatatg
atggtacctgatcaaaggataaatcacgagagccagtggccttctcacgtcagccaacgt
cagccttatatgtcctctcccgcctccatgcagcccatcacgcgcccacctcagtcatcc
taccagacgccgccatcactgccaaatcacatctccagagcccccagccccgcctccttc
cagcgctccctggagagccgcatgtctccaagcaagtctccctttctgccatctctgaag
atgcagaaggttctgcccaccgtccccacgccccaggtcacagggccgcccccccagcca
ccccccatcagaagggagatcacctttcctcctggctcagtcgaggcgtcgcagccagtc
ttgaaacaaaggcggaagattacctcaaaagatatcgttactcctgaggcttggcgtgtg
atgatgtcccttaagtcaggtcttctagctgaaagtacttgggctctggacactattaac
attctcctgtacgatgacagcaccgtcgctaccttcagtctctcccagttgtctggattt
ctcgaacttttagtagagtactttaggaaatgcctaattgacatctttggaattctgatg
gaatacgaggtgggagaccccagccagaaagcacttgatcacaatgcagtgaagagagac
gatggccagtcgtcggctgacgattccgggaaagaggaggatgacaccgagtgcgtggac
gaagaggacgaggaggatgaggacgaggacgaggaggacagcgggaagccagagacggag
aggagcagcgtgactctggcctctcccactgcccccgcagatccaaaggagaagccccgg
caggccagtaagttcgacaagctgcccataaagatagtcaaaaagaacaacctgtttgtc
gtcgaccggtcggacaagctgggtcgcgtccaggagttcaacagtgggcttctccactgg
cagctcggtggcggcgacaccaccgagcacatccagactcactttgagagcaagatggaa
atccctcctcgtaggcgtccgcctcctgctctaagctccgcaggtaggaagagagagcaa
gaaggaagaggggaggctgaggagcagcaagagaaaagcatcatcgcaaccatcgacgat
gtcctgtctgctcggccgggggcgctgcctgaagacgcgaaccccggcacccagacggag
agcggtaagttcccctttgggatacatcaagccaaaagtcaccggaacatcaagctgctg
gaggacgagccaaggagccgagacgagactcctctctgcaccatcgcgcactggcaggat
tccctggccaagcgctgtatctgtgtgtccaatattgtccgtagcttgtcttttgtgcct
ggcaacgacgccgagatgtccaaacatccaggcttggtgctgatcctggggaagctgatt
cttcttcaccacgagcatccggagaggaagcgagcgccgcagacctatgagaaagaggaa
gacgaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctggaggtc
ttaagggacaacacgttagtcacattggccaacatttctgggcagctagacttgtctgct
tacacagagagcatctgcttgccgattttggatggcttgctgcactggatggtgtgcccg
tctgcagaggcacaagacccctttccaacggtgggacccaactctgtcctgtcgccacag
agactcgtcctggagaccctctgtaaactcagtatccaggacaacaatgtggacctgatc
ttggccacgcctccatttagtcgtcaggagaaattctatgcgacgttagttaggtacgtt
ggggatcgcaaaaacccagtctgtcgagaaatgtccatggctctcttatcgaaccttgcc
caaggggacgcactggcggcaagggcgatagccgtgcagaaagggagcattggaaacttg
ataagcttcctagaggatggggtcaccatggcccagtatcagcagagccagcataacctc
ctgcacatgcagcccccgcctctagaaccacctagcgtggacatgatgtgcagggcggcc
aaggctctgctggccatggccagggtggacgagaaccgctcggaattccttctgcacgag
ggccggttgctggatatctcgatatcagccgtcctgaactctctggtggcgtctgtcatc
tgtgatgtactgtttcagatcgggcagttatga
DBGET
integrated database retrieval system
