Canis lupus dingo (dingo): 112644689
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Entry
112644689 CDS
T08371
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X2
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clud04131
]
112644689 (VPS13A)
Membrane trafficking [BR:
clud04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112644689 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
112644689
NCBI-ProteinID:
XP_025279062
LinkDB
All DBs
Position
1:complement(81304379..81539793)
Genome browser
AA seq
3171 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLIIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQEKHQVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLVRKLVRLDNLFAYWNVKSRLFYLNDYDESLDSLKNGIV
TDNTVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAVEFNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLHYHAREWWSYAIHGILEVNVCPRLRMWSWKHIREHRQ
KMKKYKDLYKKKITTKKPAGEILIALEELEKTLDVFNITISRQQAEVEAKKAGYRIFKEG
AKDSEENKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTPEEKTLLYEAIGYSETAVDPTL
PKTFEAMKLFVHLKSMSIVLREKQETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLLYIIETQKVLDLRINLKASYVIIPQD
GIFSPTSNLLLLDLGHLKVTSKSRLELPDMKQGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDNWREARKLNVSTQHILVPMHFNVELSKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPAPEAYAPAKPFQIQRSTSLGTSQISQKMLPFLELPCVEDDSEEE
YFDAPCSPLEEPLQSPTGVQSYQQKKIQKPDCSKNMIQYKIRFEVPEVLIQFYHLVGDCE
LPVVEIDVLGLGTDVELRTFDLKANAFLKEFCLKCPEYFDKNKKPIYLVTTLDNTMEDLL
TLEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHLHTEALLNTINYFNNILPQLEEKSA
PVSVAETEDKGEVIKKMPLKLSKNEDIINLQILAELSCLQIFIQDQKRNISEIKIEGLDS
EIIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMISFVDATAGSAYTDM
NVVDVQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHVITESQSNPPPVIDLITI
RLSEMRLYRTQFINDTYQKVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDLTTIFKTLHGNIWYEEGDGASPGGVKDQSSVNSGVTNASHHLEGTTVVTAAVVEV
HSQASQVKTTLNMSFRTDYLTMVLYSPGLEKTSFTDVRDPSLKLAEFKLENIISTAKMYT
DDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVRDGWVADLVLQ
ETYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEVPVQESVKWEMNIIIKNPEI
VFVADMTRSDAPALVITTQCEICWKGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVL
QPCDLFYQATQVRTDPQVMDISVKSLTLKVSPVIINTVITITSALYTSKDTIPQETTSTA
YLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKGEIIRMNIDSIFIVLEAGIGHRTVPM
LLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGI
KMKKKTKKAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEAA
TGTSTAFIRDLAPFMILNSLGLTVSVSPSDSFSVLNLPLAKSYVLKNEESLSMDYVGTKD
NDHFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQVDGV
EGSKKVTIRSPVQIKNHFSVPLSVYEGDILLGTASPGNEFNIPLTSYRSPLSLRPEDEDY
QACERIDFEEIIKNDGTFLKKKCRSINAAKKPFIINVVPEKDNLASLSVYSEDGWDLPYI
MHLWPPILLRNLLPYKIAYYIEGTEHKVYTLNEGHSAHICTVQLDKARLHLKLLDYLNHD
WKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNTGQTVVAFHSPYWMVNKTGRM
LQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVK
CKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVTEQGNDKWLSLDLEQCI
PFWPEDASNALLIQVERHQGPPKKIHFNKQENCILLRLDNELGGIIAEVNLAEHSTVITF
SDYHDGAATFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPMGSRKLKWRCGK
SHGEVTQKDDMMTPINSGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQEI
VLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSIKHTEKLEKEFKEY
TESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSFR
IQIYRIQIQNQIQGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYF
KVLIQEMDLRLDLGFVYALAELMTEAEVSEKNEVELFHKDIEAFQEEYKTVSLVDSSQVS
LYEYFHISPIKLHLSVSLSSGREEAKDSEKHEGLVAIHSLNLLLKSIGATLTDAQDVVFK
LAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFF
YEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQK
RREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVG
AVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQ
VMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIV
HGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttataattccatggaaaaacctgtatactcaaccagttgaa
gctgttctgggagacatctatttactcatagtgccttcttctaaaataaaatacgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacagcacgaactgaaacgaatagaagaa
gccaaacaaaaagtagctgatcaagaaaaacatcaagtggagaaacaggacacttttaca
gaaaaattaattactcagataataaaaaatcttcaagtgaaaatttccaacatccatatt
cggtatgaagatgatatcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccatgtttacatgatgaaactgag
aaactagttcgtaagttagtccgattggataacctttttgcctattggaatgtgaagtct
cggctgttttaccttaatgattatgacgaatcactggacagcttgaagaatggtattgtc
actgacaatactgttccagaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcagattttgacttttctgcccctaagataaatctggat
gttgagttacatgatatagcagttgagttcaataaaccacagtatttcagtgttatggag
cttcttgaatcagttgatatgatgacgcaaaatctgccatacaggaaattcaaacctgat
gtacctcttcactatcatgccagagaatggtggtcttatgctatacatggtattcttgaa
gtaaatgtctgcccccggttacggatgtggtcatggaagcatattagagaacacaggcaa
aagatgaagaagtataaagacctgtataaaaaaaagataacaactaagaagccagctggt
gaaattctcatcgctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggcaaagaaagctggatataggattttcaaagaaggt
gcaaaagattcagaggaaaataaaggatggtttagttggctgtggacttggtcagaacca
agaagtaaagaacaaccagatgttaaacctggaattcttgaagagatgttgacacctgaa
gaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatcccaccttg
ccaaaaacatttgaagccatgaagctttttgttcacttgaaaagcatgtctattgttcta
agagaaaaacaagagacacctgagctgttggatattgtagtagaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttgccagataattcaacaaaacctcgcctcctatcttcattggatgatgct
acttcactcttccaaattatatttgagataaatccgttagatgaaactgttgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcaggcctccaaaagaggtaaatctagcacagctcacgtcagtgactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggactgctgtacattattgaaaca
cagaaagttcttgatctcagaattaatctgaaggcttcctatgttattatcccacaagat
ggaatttttagtcctacatcaaatctgcttcttttagatcttggtcatctaaaggtgaca
agtaaaagtcgtttggaattgccagatatgaaacaaggaggagccaggcttgaagagatc
atgcatagagcttatgattcctttgacgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggagagaagcgcgaaaattgaatgtatctacacagcatattttg
gtacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaaggaattttggaattgattgaaagcattccgaaacccacacctgcacctgaagca
tatgcccctgccaaaccatttcagattcaaaggtccacttctttgggaacatcacagatt
tcacagaaaatgcttcctttcttggagcttccatgtgttgaagatgattctgaagaagaa
tattttgatgcaccttgtagtcctttggaagagcctcttcagtctcccactggagttcag
agttatcagcagaaaaagattcaaaagccagattgttcaaaaaatatgattcagtataaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgtgaa
ttacctgtggtagaaattgatgttttaggattgggcacagatgttgaacttagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcctaaaatgcccagaatactttgat
aaaaacaagaaaccaatttatttggttacaacactggataatacgatggaagatctgcta
acattggaatatgtgaaggctgaaaagaatctgcctaacttgaaaagtacttataacaat
gctgtacaactgattaaggtgaatttttcctctttggatattcatttacataccgaagca
cttctgaatacaataaattattttaataatatacttccacagttggaagaaaaatcagcc
ccagtgtctgttgcagagactgaagacaaaggagaggtcattaaaaaaatgcctttaaaa
ctatcgaagaatgaagatattattaacttgcaaattttagcagaattatcttgtttacag
atctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggcttgattct
gagatcattatgaggcctgcagcaactgaaataaatgcaaaactaaggaatatcattgtt
ttggattctgataaaacagctgtatacaaaaaggctgtttacatcactggaaaagaagtg
tttagcttcaaaatgatttcttttgtggatgcaactgctggttctgcatacacagatatg
aatgtggttgatgttcaagttaacttaactgttggttgcattgaagtagtttttgtcaca
aaatttctatactctatattggcttttatagataattttcaagcggctaaacaggctttg
gctgaggctactgttcaagcagcaggaatggctgctactggtgtaaaagaattggcacag
aggagttctagaatggcattggatgttaacatcaaagccccagtggtagtcatcccacag
tctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaacaca
ttccatgtaataacagagagccagagcaaccccccaccagttattgatttgataacaata
aggctgagtgaaatgcgactatacaggactcaatttattaatgatacataccagaaagta
ctagatctgctactgccattaaatcttgaggtgattgttgagcggaatttatcttgggag
tggtaccaggaagttccttgttttaacgtaaatgctcagttaaagcccatggagttcatt
cttagtcaagaagatttaacaactatttttaaaacattacatggcaatatatggtatgaa
gaaggtgatggtgcctcacctggaggagtaaaagatcagagtagtgttaatagtggagtt
actaatgcttcacaccatttagaaggaacaactgtagtgaccgctgctgtggtagaagta
cattcacaggcctctcaagttaagacaacactgaatatgagcttcagaacggactatctc
accatggtactgtatagtccaggtcttgaaaagacttcctttacagatgttcgtgatcct
tctctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtataca
gatgactcaacattttcttccttctcattaaaaaattgtattttagatgataaaaggcct
catgtcaagaaggcaactcctagaatgataggactgacagttggttttgacaaaaaggac
atgatggatgtaaagtatagaagagtcagagatggttgggtggctgatttagtccttcaa
gaaacgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgag
gcctacaccacaggcactgctgtagaaaccagtgttcaaacatggactgctaaggaagaa
gtacctgtacaagaatcagtaaagtgggaaatgaatattattattaaaaatcctgaaatt
gtgtttgtggctgatatgacaagaagtgatgctcctgccttagtcattacaacacagtgt
gaaatttgttggaaaggtgaccttgagaataatacaatgactgctgccattaaagatctt
caagtgagagcctgcccatttcttccagtcaagagaaaaggcaaaatcactactgttttg
cagccctgtgatttgttctatcaagctactcaagtacgtacagatccacaagtgatggat
atatcagtaaaatccctcacactaaaggtttcaccagtcatcataaatactgtgattacc
ataacatcagcactttatacatccaaggacaccatcccacaggaaactacttctacagca
tatttatgggagaagaaggatacaaagaatttaaaaatgtggtttcttgaagaaccaaat
gaagttgaaaacaaagctcccacaactgaattgatacttaaaggagagatcataagaatg
aacattgattctatctttatagttcttgaggctggaattggtcatagaacagtgcctatg
ctgctggcaaagtcacgtttttcaggggaaggcaaaaactggagttccttgataaatctc
tactgtcagcttgaactagaagtgcattattacaatgaaatgttcggtgtatgggagcct
ttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatcttggaatc
aagatgaaaaagaaaacaaaaaaggccattgttgagtcagatactgaagaagaaaattac
aaagtgccagaatataaaaccgttatcagtttccattcaaaagaccaactaaacattaca
ttatccaaatgtggccttgtaatgttgaataatttagtcaaggcatttacagaagctgcc
actggaacctcaactgcctttatacgggatctagcgccatttatgattttgaattctctt
ggacttactgtctctgtttcaccaagtgattcttttagtgtactcaacctcccattggca
aaatcatacgtattgaaaaatgaggagagtttaagtatggactacgtgggaactaaagac
aatgatcatttcaatgcaatgaccagcctaagcagtaaactcttcttcattcttcttaca
cctgccaaccactctactgctgataaaattcctttaacaaaagtgggacggcgactgtac
actgtaagacacagagagtctggggttgaaagatcaattgtttgtcaagttgatggagtg
gaaggaagtaagaaggtaacaattcgctccccagtgcagataaaaaatcatttttcagtc
ccactttctgtttatgaaggggacattttgttgggaacggcctcacctggaaatgaattc
aacataccattaacatcttaccgatcacccctttctctgaggccagaagatgaggactat
caagcatgtgaaagaattgactttgaagaaattataaaaaatgatggcacttttctaaaa
aagaaatgtagatctataaatgctgctaaaaaaccatttatcattaatgttgtcccagaa
aaagataatttggcttctctgtccgtgtattcagaagatggttgggatttaccatacata
atgcatttgtggccacctatcctgcttcgaaatcttcttccttacaaaattgcttactat
atagagggcactgaacataaagtttatactctaaatgaaggacattcagcccatatttgt
actgtgcagttggataaagccagactacatttaaaattacttgactatcttaatcatgat
tggaaaagtgaatatcatataaaacctaatcagcaagatattagtttcatcaattttacc
tgtgttacagaaatagaaaagactgatttagatattgctatccatgtgacttacaatact
ggccagacagttgtggcatttcatagtccttactggatggtcaataaaactggtcgaatg
ttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaagccagtt
ctcttttcttttcaaccaaagcacttttttaataataataaggttcagctgatggtaact
gatagtgaattgtcagatcagttttcgattgatactgttggtagtcatggagctgttaaa
tgtaaaggtctgaaaatggactatcaagttggtgtcactatagacctcagcagttttaac
attaccaggattgtgacatttacccctttttatatgatagaaaacaaaagcaagtatcat
atatcagtaactgaacagggaaatgataagtggctctctcttgatttggagcagtgtatc
cccttttggcctgaggatgcttctaatgcacttcttattcaagttgaaagacatcaaggc
cctcccaaaaagatacattttaacaagcaagagaattgtattttattgcgcctggataat
gagcttggaggtattatagcagaagttaatttggctgaacattctacagttattacattt
tcagattatcatgatggagcagctacattcctattaataaatcacaccaagagtgacatt
gttcagtacaatcaaagttctctcagtgaaatagaagattccctccctcctggaaaagca
gtattttatacatgggctgatccaatgggctctagaaagctgaagtggagatgtggaaaa
agccatggtgaagtaacacaaaaggatgatatgatgacacctataaattcggggaaaaag
accatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaagat
ccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcggagcaagaaatt
gtgttggccttacaagatgttggaatttctctcgtcaacaattacacaaagcaagaagta
gcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaaggca
agatggaagccaatgagtataaagcacactgagaagttagagaaagaatttaaggaatat
actgaatcttcaccttcagaagataaggttattgaattggacactaacattccggttcgc
ttcacacctagtggtactaatatgaaaattctgcaaccacatgtaatagctatacgaaga
aattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcatttaga
attcaaatttacagaatacagatccaaaaccagattcaaggtgctatatttccatttgta
ttttatccaattaaacctcccaagtcagtcaccatggattcagctccaaagccttttaca
gatgtcagtattgtcatgagatctgctgggcattcccagatatcacgtattaagtacttc
aaagtgttgatccaagaaatggatctcagattagatcttgggtttgtttatgctttagca
gaacttatgacagaagctgaagtgagtgaaaaaaatgaggttgaactttttcataaagat
atagaagctttccaagaagaatataaaacagtttcattagtagattcatcacaagttagt
ctctatgaatatttccatatatctcctatcaagttgcatttaagtgtttcactgagttcg
ggcagagaagaagccaaagattcagaaaaacatgaaggactggtggctattcattcttta
aatcttttgctgaagagtatcggtgccactcttacagacgcccaagatgtagtttttaag
cttgcattttttgaactcaactatcagttccatacagcttctgaactacagtctgaagta
ataagacactattcaaaacaggccattaagcaaatgtatgtactcattcttggacttgaa
gttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcatttttt
tatgaaccttaccagggagccatccagggtcctgaagagtttgtggaggggatggcgcta
ggactgaaggcgctggttggtggagctgtcggtggattagctggtgctgcctccaaaatc
actaatgctatggctaaaggggtggcagctatgactatggatgaagactaccaacagaag
agaagagaagcaatgaataagcaaccagctggtcttagagaaggcatcactcgtggagga
aaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaa
ggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagttgga
gcagtggcaaggccaactggaggcatcatagacatggccagcagtacatttcagggaata
aaaagagctacagagacttctgatgaagtggagagccttcgaccccctcgattctttaat
gaggatggagttatcagaccttacaggttgagggatgggactggaaaccagatgttacag
gtcatggaaaatggaagatttgcaaaatacaagtattttacccatgtcatgatcaataaa
acagatatgttaatgataactaaaagtggtgtattgtttgtaacaaaaggaacatttgga
cagcttacatgtgagtggcagtatagttttgatgaatttaccaaagagccattcattgtt
catgggagaagattacgcattgaagcaaaggaacgggtgaagtctgtgtttcatgccaaa
gagtttggaaaaataattaacttcaagaccccagaggacgctaggtggatcctcacaaaa
ctagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
