Canis lupus dingo (dingo): 112644776
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Entry
112644776 CDS
T08371
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03082
ATP-dependent chromatin remodeling
clud04714
Thermogenesis
clud05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112644776 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112644776 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112644776 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clud03021
]
112644776 (SMARCA2)
03036 Chromosome and associated proteins [BR:
clud03036
]
112644776 (SMARCA2)
Transcription machinery [BR:
clud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112644776 (SMARCA2)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112644776 (SMARCA2)
Chromatin remodeling factors
BAF complex
112644776 (SMARCA2)
PBAF complex
112644776 (SMARCA2)
GBAF(ncBAF) complex
112644776 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
112644776
NCBI-ProteinID:
XP_025279200
LinkDB
All DBs
Position
1:90831946..91007064
Genome browser
AA seq
1574 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGMHQMHKPIDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLISGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQPQHQQPPQPQPQAQQPQQQAL
VNYNRPSGPGPELSGPSTPQKLPVPAPSGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPS
PILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKA
TVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQ
KIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETE
RIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEK
KKRRRRKKKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQ
LDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQ
IIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWA
PSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKI
LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS
NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL
DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAF
LQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLME
EDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEE
MEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN
YKDRCNVEKVPGNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI
RNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDES
NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQ
DENEQSEASGTDDE
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggcgccatgccccatccagggccttcaccgggaccggga
ccctctcctggaccaattcttggacccagtccaggacctggaccatccccagggtctgtc
cacagtatgatggggccaagtcctgggcctccgagtgtctcgcaccccatgccaacgatg
ggctctgctgacttcccacaggaaggcatgcatcaaatgcataagcccatcgatggtatg
catgacaaggggattgtagaagatattcattgtggatccatgaaaggcaccggtatgcgg
ccacctcacccagggatgggtcctccccagagtccaatggatcaacacagccaaggttac
atgtcgccacacccgtctccgctgggagccccagagcacgtctccagccctatgtcggga
ggcggcccgaccccaccccagatgccgccgagccagccggggcccctcatctcgggcgat
ccgcaggcgatgagccagcccaacagaggtccctcgcctttcagccctgtccagctgcat
cagctgcgagcgcagattctcgcttacaaaatgctggcccggggccagcccctccccgaa
acactgcagctcgcagtccaggggaagaggacgttgcccggcatgcagcagcaacagcca
cagcatcagcagcccccgcagccccagccacaggcccagcagccccagcagcaggccctt
gttaactacaacagaccatctggcccggggccggagctgagcggcccgagcaccccgcag
aagctgccggtgcccgcgcccagcggccggccctcgcccgcgccccctgctgccgcgcag
ccgcccgcggccgccgtgcccgggccgtccgtgccgcagccggccccggggcagccctcg
cccatcctgcagctgcagcagaagcagagccgcatcagccccatccagaagccgcaaggc
ctggacccggtggagatcctgcaggagcgtgagtacaggcttcaggctcgcatagctcat
aggatacaagaactggaaaacctgcctggctctttgccaccagatttacgaactaaagca
actgtggaactgaaagcacttcggttactcaatttccaacgtcagctgagacaggaggtg
gtggcctgcatgcgacgggacacaaccctggagacggccctcaactccaaagcctacaag
cggagcaagcgccagaccctgcgggaggcccgcatgacagagaagctggagaagcagcaa
aagatcgagcaggagaggaagcgccgccagaagcaccaggaatacctgaacagcattttg
caacatgcaaaggatttcaaggagtaccatcggtctgtggctgggaagatccagaagctg
tccaaagcggtggcaacttggcacgccaacactgagagagagcagaaaaaagagacggag
cgaatcgagaaggagagaatgcgcagactgatggctgaagatgaagagggctacaggaaa
ctgatcgatcaaaagaaagacaggcgtttggcttaccttctgcagcagactgacgagtat
gtggccaacctgaccaacctggtttgggagcacaagcaagcccaagcagccaaagagaag
aagaagaggaggaggaggaagaagaaggctgaagagattgccgagggaggagagtctgcc
ctgggaccagatggagagcccatagatgaaagcagtcagatgagtgacctgcctgtcaaa
gtgactcacacggaaactggcaaggtcctgtttggaccagaagcacccaaagcaagtcag
ttggatgcctggttggaaatgaaccctggttacgaagttgcacctcgatccgacagtgag
gagagcgattctgattacgaggaggaggacgaggaagaagagtccagtcggcaggacaca
gaagagaaaattcttctggatccaaacagtgaagaggtttctgagaaggatgccaagcag
atcattgagacagctaagcaggacgtggacgatgagtacagcatgcagtacagtgccaga
ggctctcaatcctactacacggtggcccatgccatctctgagcgggtggagaagcagtct
gccctcctcattaacgggaccctgaagcattatcagctccagggcctggaatggatggtt
tccctgtataataacaatttgaacgggatcttagccgatgaaatggggctagggaagacc
atacagaccattgcactcatcacttatctgatggagcacaaaagactcaatggcccctat
ctcatcattgttcccctttcgactctatctaactggacatatgaatttgacaaatgggct
ccttctgtggtgaagatttcttacaagggcacccctgcaatgcgtcgctcccttgtaccc
cagctgcggagtgggaaattcaacgtcctcttgactacttatgagtacattatcaaagac
aagcacattcttgcaaagattcggtggaaatacatgatagtggacgaaggccaccgaatg
aagaatcaccactgcaagctgactcaggtcttgaacactcactatgtggcccccagaagg
atcctcctgactgggaccccactgcagaacaagctcccagaactctgggccctccttaac
ttcctcctccctaccatttttaagagctgcagcacatttgaacagtggtttaatgccccg
tttgccatgactggagaaagggtggacttaaatgaagaagaaaccatattgatcatcagg
cgtctacataaggtgttgagaccatttttactgaggaggctgaagaaagaagttgagtcc
cagctgccagaaaaagtggaatacgtgatcaagtgtgacatgtcagcgctgcagaagatc
ctctatcgccacatgcaagccaaagggatcctcctcacggatggctctgagaaagataag
aaggggaagggaggtgctaagacactcatgaacactatcatgcagttgagaaaaatctgc
aaccacccatacatgtttcagcacattgaggaatcttttgctgaacacctgggctattca
aatggagtcatcaatggggctgagctgtatcgggcctcggggaagtttgagctgcttgat
cgtattctgccaaaactgagagccactaatcaccgcgtgctgcttttctgccagatgacg
tccctcatgaccatcatggaggattactttgcttttcggaacttcctgtatctccgcctt
gacggcaccaccaagtctgaggaccgtgctgctttgctgaagaaattcaacgagcccggg
tcccagtatttcatcttcctgctgagcacccgagcgggcggcctgggcttgaacctccag
gcagctgataccgtggtcatctttgacagcgactggaatcctcaccaggatctgcaagca
caagaccgagctcaccgcatcggccagcagaacgaggtccgggtgctgaggctgtgcacg
gtgaacagcgtggaggaaaagatcctcgcggccgcaaagtacaagctgaacgtggatcag
aaagtgatccaggcgggcatgtttgatcagaagtcttcgagccacgagcggagggcattc
ctgcaggccatactggagcacgaggaggagaacgaggaagaagatgaagtgccagatgac
gagactctgaaccagatgattgcccggcgagaagaagaatttgatctctttatgcgtatg
gacatggaccggcggcgggaagacgcccggaacccgaagcggaagcctcgcttgatggag
gaagatgagctgccctcctggattattaaggatgatgccgaagtggagcggctcacgtgt
gaagaagaggaggagaaaatatttggcagggggtctcgccagcgccgggacgtggactac
agcgacgccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaa
atggaagaggaagtacggctcaagaagcgaaaaagacgaagaaatgtggataaagatccg
gcaaaagaagatgtggaaaaagccaagaagaggagaggccgccctccagctgagaaacta
tccccaaatccccccaaactgacgaagcagatgaacgccatcatcgatactgtgataaac
tacaaggacaggtgtaacgtggagaaggtgcccggtaattctcagttggaaatagaagga
aacagttcagggcggcagctcagtgaagtcttcattcagttaccttcgaggaaggaatta
ccagaatattatgaattaattaggaagccggtggatttcaaaaaaataaaggaaagaatt
cgtaatcacaagtaccggagcctgggtgacctggagaaagatgtcatgcttctctgtcac
aatgctcagacgttcaacttggagggatcccagatctatgaagactcgatcgtcttacag
tctgtgtttaagagtgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagc
aacgaagaggaggaggaggaagatgaggaggagtctgagtcagaagcaaagtccgttaag
gtgaaaatcaagctcaataagaaagacgagaaaggccgggacaaaggcaaaggcaagaaa
aggccgaatcggggaaaagccaagcctgtagtgagcgatttcgacagtgatgaggagcag
gatgaaaatgaacagtcagaagcaagtgggactgatgatgagtga
DBGET
integrated database retrieval system
