Canis lupus dingo (dingo): 112646213
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Entry
112646213 CDS
T08371
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clud04121
]
112646213 (TRIM56)
Enzymes [BR:
clud01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112646213 (TRIM56)
Ubiquitin system [BR:
clud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112646213 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
RING_XB3-XBAT31
GxGYxYP_N
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
112646213
NCBI-ProteinID:
XP_025281739
Ensembl:
ENSCAFG00020013319
UniProt:
A0A8C0KK46
LinkDB
All DBs
Position
6:complement(8508980..8516914)
Genome browser
AA seq
771 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLAEGGHLRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLMGGAGTGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLAELESARMVEKEA
LARLREQAAKVGTQVEEVAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELESREQ
VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPGPAPCLLPQLELHPGLLD
KNCRLLRLSFEEQQPQKDSGKDEAGSQGGDETQSRREDGAKSERQGAIQPQSRDGAYAPK
ENRAQTPQEDGAQTPKEDRAKTPQEDGAQTPKEGRAQTPLEDEGAQTPRGGRSNKKRKFK
GRLKSISREPSPAPGLNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVA
DEQNRALKRFSLSGDYRGAVPVPEGCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRA
LSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSP
QGNFVGSDWQQNSVVVCDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVI
LDPKGSLLGDFLTAYHGLEKPRVTTMVDGRHLVVSLSNGTIHVFRVRSPDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggatcctcgccctccctactggaagccctgagcagcgatttcctggcc
tgtaaaatatgtctggagcagcttcgggcacccaaaacgttgccctgcctgcacacctac
tgccaggactgcctggcccagctggccgagggcggccacctccgatgccccgagtgccgg
gagacggtgcctgtgccaccggcaggcgtggccgccttcaagaccaacttctttgtcaac
gggctgctggatttggtgagggcccgggctggtggagacttgcgcgcggggaagccagcc
tgtgcgctgtgtcccctgatggggggggccggcacaggggggccagccacggcccggtgc
ctggactgtgcggatgacctgtgccaggcctgtgctgatgggcaccgctgcacccggcag
acccacacccaccgggtggtggacctggtgggctaccgggcaggctggtacgacgaggag
gcccgggagcgccaggcggcccagtgcccccagcaccccggggaggctctgcgcttcctg
tgccagccctgctctcagctgctgtgccgcgagtgccgcctggacccccacttggaccac
ccctgcctcccactggctgaggctgtgcgcgcccggaggccaggcctggaggagctgctg
gcaggtgtggacaacaacctggctgagctcgagtccgcccggatggtggaaaaggaagcc
ttggcccgtctgcgggagcaagctgctaaggtggggacacaggtggaggaggtggctgag
ggggtcctccgggccctcctggcccagaagcaggaggtgctggggcagctacgggcccat
gtggaggctgccgaggaggctgctcgggagagactgggggagctggagagccgggagcaa
gtggccagggctgcggctgcctttgcccgtcgggtgctcagcctgggccgcgaggctgag
atactctcgctggaaggggcgattgcccagaggctccggcagctgcagggttgtccctgg
atgcctgggccagccccctgcctgctgccccagctggagctccatcctgggctcctggac
aagaactgccgcctgctacggctctcctttgaggagcagcagccccagaaagacagtggg
aaggatgaagctggaagccagggaggggatgaaactcagagccgcagagaggatggagcc
aagtcagagagacaaggtgcaatccagccccagagcagggatggagcttatgccccaaag
gagaacagagcccagacaccccaggaagatggagcccagaccccaaaggaggacagagcc
aagacaccccaggaagatggagcccagaccccaaaagagggcagagcccagacaccccta
gaagatgaaggagcccagaccccaaggggtggcagatccaacaaaaagaggaagttcaaa
ggcaggctcaagtcaatttcccgggagcccagcccagcacccgggctgaacttggagggc
tctggcctcctccccaggcccattttttcctgcagcttccccacacggatgcctggagac
aagcggtctcctcggatcacagggctctgtccctttggcccccgggagatcctggtggcc
gacgagcagaacagggcactgaagcgcttctccctcagcggtgactacaggggcgcggta
cccgtccctgagggctgctccccgtgcagcgtggccgccctgcagggggcagtggccttc
tcggctggtgcaaggctctacctcatcagccctgatggcgaagtgcagtggcgccgggcc
ctgagcctctcccaggccagccacgctgtggctgcgatgccaagtggggaccgggtggcc
gtgagcgtgtcaggccacgtggaggtgtacaacatggaaggcagcctggccacccggttt
atcccggggggcaaggctaacaggggcctgcgggcactggtgttcctgaccaccagcccc
cagggcaactttgttggctccgactggcagcagaatagtgtggtggtctgtgatgggctg
ggccaggtgattggggagtaccgggggccaggcctgcacggctgccagccaggctctgtg
tctgtagataagaaaggctacatctttctgacccttcgcgaggtcaacaaggtggtgatc
ctagatccgaaggggtcactgctgggcgacttcctgacagcttatcacggcctggaaaag
cccagagtgaccaccatggtggacggcaggcatctggtcgtgtctctcagtaacgggacc
atccatgtctttcgggtccgctctcctgatagttaa
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