Canis lupus dingo (dingo): 112646504
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Entry
112646504 CDS
T08371
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112646504 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112646504 (EDC4)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112646504 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112646504 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
112646504
NCBI-ProteinID:
XP_025282343
Ensembl:
ENSCAFG00020018504
UniProt:
A0A8C0L1J7
LinkDB
All DBs
Position
5:complement(81597096..81608060)
Genome browser
AA seq
1400 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRSSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLTGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEENEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQSNPDVVAPLPTHT
THEDFAFGESRPELGSEGLGSAPQGSQPDLRRIVELPAPADFLSLSNETKPKLMTPDAFM
TPSTSLQQIAASPSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQL
DGSLTMSGSSSLQASPRSLLPSLLPGPADKLTPKVPGQVPTAASALSLELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALHLLSP
RPRPGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDNQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTKVPT
PRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAVGSRLMEHQGPEPPEDWLALIWQQQREL
AELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAIAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQ
HQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSL
GKVARRLSLMLHGLVTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcggtcatctaatgcc
tacaatggggatctcaatgggcttcttgtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgggccatgccacctattaaccttcaggaaaagcaggtc
atctgcctcacaggagatgacagctctacatgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcaagcaaagcacggggcagcaacaaggtgaaa
atccagcctgtggccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaactcctttttggcctatgccattcgggctgccaacaatggctcggcgatggtg
cgggtaatcagtgtcagcacttcagagcggaccctgctcaagggcttcacaggcagtgtg
gctgatctggcctttgcacacctcaattcctcacagctggcctgcctggatgaggcgggc
aacctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtc
catatccagcagccagagggcacgccactgaaccacttccgcaggatcatctggtgcccc
ttcatccctgaggagaatgaggactgctgtgaggagggcagcccaacagtggccttgttg
catgaggatcgggctgaggtgtgggatctggacatgctccgctccaaccacagcacttgg
cctgtgcgtgtcagccaaatcaagcaaggcttcatcgtggtgaaaggccacagcacttgc
ctaagtgaaggggccctctcacctgatgggactgtcctggctactgcaagccatgatggc
tttgtcaagttttggcagatctacattgaggggcaggatgagccaaggtgtctgcatgaa
tggaagcctcatgatgggcggtccctttcctgcctcctgttctgtgataaccacaagaaa
caggatcctgaagtccctttctggaggttccttattactggcgctgaccagaatcgggaa
ctgaagatgtggtgcacagtgtcctggacctgcctgcagaccattcggttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgcctggacctctcggcagaa
taccttattctcagtgatgtgcaacggaaggttctctacgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccatcctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcct
gccgaggaggagaatgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagctggtgtgctcatcaaactcttttgtgtacatactaaggctttgcaggatgtg
cagatccgtttccagccacagtcgaaccctgatgtggtggccccgctccccacccacacc
acccatgaggactttgcatttggagagtctcggcctgaactgggctctgagggcctgggg
tcagctccccagggctcccagcctgacctccgacgcattgtggagttgcctgcacctgct
gacttcctcagtctgagcaatgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcacctccctgcagcagatcgctgcttcccccagcagcagcagtagcagctcc
agctccagctccagctcctcctctctcacagccgtgtctgccatgagcagtacctcagct
gtggacccctccttgcccaggccgcctgaggagctgaccttgagccccaagctgcagctg
gatggtagtctgacaatgagcggcagtagcagcctacaagcaagcccacgcagcctattg
cccagcctacttccaggtccagctgacaaactgactcccaaagtacctgggcaggtacct
actgctgcctctgcattatcactggagctgcaagaagtggagcccctggggctaccccag
gcttctcctagccgtacccgttcccctgatgttatatcctcagcttccactgccctgtcc
caggacatccctgagattgcatctgaggccctgtcccgtggttttgtctcctctgcccct
gagggccttgaaccagacagtatggcctcagctgcctcagcactacacctgctgtcccca
cggccccggccagggcccgaacttggctcccagcttggcctggatggaggccctggggat
ggggatcggcatagtaccccttcccttttggaggcagcattgacccaggaggccacagcc
cctgacaatcaggtctggcctacggcaccagacattactcgtgagacctgcagcagcctg
gcggagagtcccaggaacggtctccaggagaagcacaagagcctggccttccaccgacca
ccttatcatctgctgcagcaacatgacagccaggatgccagtgctgagcaaagtgaccat
gatgatgaggtggctagccttgcctctgctgcagggggctttggcaccaaagttcccact
ccccggctaccggccaaggactggaagaccaagggttctcctcgagcctcacccaagctt
aagagaaagggcaagaaagatgacggggattcggccgtggggtcccggctcatggagcac
caggggccagaacctcctgaggactggctagcactgatttggcaacagcagcgcgagctg
gcggagctgcgtcacagccaggaggagttgctgcagcgtctttgcacccagctcgaaggc
ctgcagagcactgtcacaggccacgtagaacgcgctctagagtcacggcacgagcaggag
cagcggcggctggagcgggcactagctgaggggcagcaacggggtgggcagctgcaggag
cagctgacgcaacagctgtcccaggcgctgtcttcggccatagctgggcggctagagcgc
agcatacgggatgagatcaagaagacggtgcctccatgtgtctccaggagtctggagcca
gtggcaggccagctgagcaactcagtggccaccaagctcacagccgtggagggtagcatg
aaagagaatatctccaaactgctcaagtccaagaacttgacagatgccattgcccgagca
gctgcagacacattacaggggccaatgcaggctgcctaccgtgaagccttccagagtgtg
gtgctgccagcctttgagaagagctgccaggccatgtttcagcagatcaatgatagcttc
cgactgggcacgcaagaatacttgcagcagctagagagtcacatgaagagccggaaggca
cgagaacaggaggcacgggagcctgtgttggcccagctgcggggcctggtcagcacactg
cagggtgccactgagcagatggcagccactgtgtccagcagcgttcgagctgaggtgcag
caccagctgcacgtggctgtgggcagcctgcaggagtcaattttagcgcaggtacagcgc
attgttaagggtgaagtgagtgtagcactcaaggagcaacaggctgccgtcacgtctagc
atcatgcaggccatgcgttcagccgctggcacacctgtccctgctgcccacctcgactgc
caggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgactgctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggac
ccagggcaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctc
atccagcagctggcctctgaccttggtactcgaactgacctcaagctcagttacttggaa
gaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtc
atggcccaggtgcgccagaagctcttccagttcctgcaggctgagccacacaactcactt
ggcaaagtggcccggcgtctcagcctcatgctgcacggcctcgtaacccctagcctccct
tag
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integrated database retrieval system
