Canis lupus dingo (dingo): 112646872
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Entry
112646872 CDS
T08371
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clud04515
]
112646872
Cell adhesion molecules [BR:
clud04515
]
Cadherins
Cadherin related
112646872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
ICAT
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Zip
Motif
Other DBs
NCBI-GeneID:
112646872
NCBI-ProteinID:
XP_025283015
Ensembl:
ENSCAFG00020006431
ENSCAFG00020006476
LinkDB
All DBs
Position
5:complement(63079748..63235302)
Genome browser
AA seq
1013 aa
AA seq
DB search
MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTANEEEFLRTYAGVVNSQLSQLPQHSI
DQVNKHKPWLEPTYHGIITENDNAVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFK
IHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGTSVKKSHKA
TVHIQVNDVNEYAPVFKEKSYKATIIEGKQYDSILRVEAVDADCSPQFSQICSYEIVTPD
VPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKRRAAEDVLVKVSIKPTCSPGWQGW
NNRIEYEPGTGTLALFPNVHLETCDESVASVQATVELETGHIGKGCDRDTYSEKSLHQLC
GAASGTAELLPSPSGSSNWTVGLPTDNGHDSDQVFEFNGTQAVRVPDGIVSVNPKEPFTI
SVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFLLRQDPSEEKKYKPAEFHW
KLNQVCDEEWHHYVLNVEFPSVILYVDGVSHEPFSVTEDYPLHPSKIETQLVVGACWQEY
PAFENDNETEPVPMASAGGDLHMTQFFRGNLAGLTIRSGKLADKKVIDCLYTCKEGLDLQ
VPEDSSRGVKIHTNPSQLALTLEGDDVGELDKAMQHVAYLNSRQFPTPGIRRLKITSTVK
CFNEAACISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEFESPEGVFLFPELRIISTI
TREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVDGEELNPAQESLEVDMARLQQKGI
AVSGSDLGMVFTGVDTMASYEEVLRLLRYRNWHTRSLLDRKFKLVCSELNGRYVSNEFQV
EVNVIHAASPMEHASHMAAQPQFVHPEHHAFVDLSGHNLASPHPFAVVPSTATVVIVVCV
SFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEE
EEEEEEESEDGEEEDDITSAESESSEEEEGEHGDQQNVNRQQQLEWDDSTLSY
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgagggggctcccgggaagagtccggaggaaatgtacattcaacagaaggtc
cgagtgctgctcatgctgaggaagatggggtcaaatctgacggccaatgaggaggagttc
ctgcgtacctacgcgggggtggtcaacagccagctcagccagctaccccagcactccatc
gaccaggttaacaagcacaaaccatggcttgagcccacctatcatggcataatcacagaa
aatgataatgcagtgctcctcgaccctcctctgattgccctggataaagacgcacctctg
cgattcgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaa
attcatgggcagaatgtcccctttgatgcagtggtagtggataagtccactggtgaggga
ataattcgctcaaaagagaaactggactgtgagctgcagaaagactacacattcaccatc
caggcctatgactgcggcaaggggccggatggcaccagcgtgaaaaagtctcataaagca
actgtccatattcaggtgaacgacgtaaatgaatatgcgccagtgttcaaggagaagtcc
tacaaggcgaccatcatcgagggcaagcagtacgacagcatcctgagggtggaggccgtg
gacgcggattgctcccctcagttcagccagatttgcagctatgaaatcgtcactccagat
gtgccatttgccatcgacaaagatggttatataaaaaacacagagaagctaaactacggg
aaggagcaccagtataagctgacagtcactgcctatgactgtgggaagcgaagagcagcg
gaagatgtgctggtgaaggtcagcatcaagcccacctgcagccccgggtggcaaggatgg
aacaataggatcgagtatgaacctggcacaggcactttggccctcttcccaaatgtccac
ctggaaacgtgtgatgaatctgtggcttcggtgcaggcaacggtggagctggagactggc
cacatcgggaaaggctgtgaccgtgacacctactcggagaagtcccttcaccagctatgt
ggtgctgcgtctggcactgccgaactgctcccttccccaagtgggtcttcgaactggacc
gtcggcctccccactgacaatggccatgacagtgaccaggtcttcgagttcaatggcacg
caggcagtgagggtcccagatggcattgtctcagtcaacccgaaggaaccttttacgatt
tctgtgtggatgaggcacgggccttttggcaggaagaaggagacgattctttgtagttcg
gacaaaacagacatgaaccggcaccattattctctctatgtccatggctgccggctgatt
ttcctcctccgtcaggatccttcggaagagaagaagtataaacctgcggaattccactgg
aagttgaatcaggtctgtgatgaggagtggcaccactacgtcctcaatgtagaattccca
agcgtgattctctatgtggacggtgtttctcacgagcccttctctgtcaccgaggattac
ccacttcatccatccaagatcgaaactcagctcgtggttggggcctgctggcaagagtat
ccagcatttgaaaatgacaatgaaaccgaacctgtgcctatggcctctgcaggtggtgac
ctgcacatgacccagtttttccgaggtaatctggctggcctaaccatccgttctgggaaa
ctcgcggacaagaaggtgattgactgtctgtatacctgcaaagaagggctggacctgcaa
gtccctgaggacagcagtagaggcgtgaagatccataccaaccccagtcagttggcattg
accttggagggagacgatgttggggagctggataaggccatgcagcacgtcgcctatctg
aactcacggcaattccccacacctgggatccgaagactcaaaatcaccagcacggtcaag
tgttttaacgaggccgcctgcatctccgtgcccccagtggatggctacgtgatggtgttg
cagccggaagagcccaagatcagcctgagtggggtccaccattttgctcgagcggcttct
gagtttgaaagcccagaaggagttttccttttccccgagcttcggatcatcagcaccatc
acaagagaagtggagcctgaaggggaaggggacgaggaccccacagttcaagagtcgctg
gtgtctgaggagatcgtgcacgacctggatacctgcgaggtcacggtggacggggaggaa
ctgaacccagcccaggagagcctggaggtggacatggcccgcctgcagcagaagggcatt
gcagtgagcggctccgacctgggcatggtctttacaggtgtggacaccatggccagctac
gaggaggttctacgcctcctgcgctatcggaactggcacaccaggtctctgcttgaccgg
aagttcaagctcgtctgctcggagctgaatggccgctatgtcagcaacgagtttcaggtg
gaggtgaacgtcatccacgcggccagccccatggagcacgccagccacatggctgcccag
ccgcagtttgtccacccggagcaccatgccttcgttgacctctcgggtcacaacctggcc
agcccccacccgttcgcagttgtccccagcaccgccactgttgtgatcgtggtgtgtgtc
agcttcctggttttcatgattatcctgggagtgttccggatccgggctgcacatcagcga
accatgcgggaccaggacaccgggaaggagaatgagatggattgggatgactctgccttg
accatcactgtaaaccctatggagacatatgaggaccagcacagcagtgaggaggaagaa
gaggaggaggaggaagaagagagtgaggatggggaagaggaggatgacatcaccagtgcc
gagtcggaaagcagcgaggaggaggagggggagcacggggaccagcagaacgtgaacagg
cagcaacagctagagtgggatgactccaccctcagctactga
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