Canis lupus dingo (dingo): 112646992
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Entry
112646992 CDS
T08371
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03013
Nucleocytoplasmic transport
clud05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112646992 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112646992 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112646992 (NUP54)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112646992 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
112646992
NCBI-ProteinID:
XP_025283295
Ensembl:
ENSCAFG00020011564
LinkDB
All DBs
Position
32:complement(763270..794358)
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AA seq
562 aa
AA seq
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MAFNFGAPSGTSGTAAAPAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTAGSAFSFSAPANTGATGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNK
DEDGLLVLVFNKKETDIRSQQPQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGITLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHMRGGVFS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggctccctcgggcacctctggcaccgccgcggcccccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacatctacaacagcaggttctgctttcagcttttctgctccagctaac
acaggcgctactggactctttggtggtactcagaacaaaggttttggatttggtactggt
tttggcacaacaactggaagtagtactggtttaggtactggtttgggaacaggactggga
tttggaggatttaatacacagcagcagcaacagcaaactacattaggtggtctcttcagt
cagcccacacaagctcctacccagtccaatcaactgataaatactgcaagtgctctttct
gctccaacgctgttgggagatgagagagatgctattttagcaaaatggaatcagctgcag
gccttttggggaacaggaaaaggatatttcaacaataacatcccaccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggatatagttgtatgcccaataataaa
gatgaagatgggctactggttttagttttcaacaaaaaagaaacagatattcgaagccag
caaccgcagttggtagaatcattgcataaagttttgggaggaaaccagacacttactgta
aatgtagagggtattaaaacattgccagatgatcagacagaagttgtcatttacgttgtt
gaacgctctccaaatggtacttcaagaagagttccagctacaacactatatgcccatttt
gaacaaactaatataaaaacacagttgcagcaacttggtataaccctttctatgactaga
actgaactttctcctgcacaaatcaaacaacttttacagaaccctcctgctggtgttgat
cccattatctgggaacaagccaaggtggataaccctgattctgaaaagttaattcctgta
cccatggtgggtttcaaagaacttcttcgaagactgaaggttcaagatcagatgactaag
cagcatcagaccagattagatattatatctgaagatattagtgaattacagaagaatcaa
actacaactatggccaaaattgcacaatataagaggaaactcatggatctttcccataga
accttacaggtcctaatcaaacaggaaattcaaaggaaaagtgggtatgccatccaagct
gatgaagagcaattgcgagttcagctagatacaattcagtgtgagctgaatgcacctact
cagtttaagggccgactaaatgaactgatgtcccaaatcaggatgcagaatcattttgga
gcggtcaaatcggaggaaagatattacatagatgcagatctgttacgagaaatcaagcag
catttgaaacaacaacaggaaggccttagccacttgattagtatcataaaagatgaccta
gaagatataaagttggtagaacatggattgaatgaaaccatccacatgagaggtggtgtc
tttagttga
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integrated database retrieval system