KEGG   Canis lupus dingo (dingo): 112647054
Entry
112647054         CDS       T08371                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03013  Nucleocytoplasmic transport
clud05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112647054 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    112647054 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clud03019]
    112647054 (NDC1)
Messenger RNA biogenesis [BR:clud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112647054 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 112647054
NCBI-ProteinID: XP_025283464
Ensembl: ENSCAFG00020011978
LinkDB
Position
5:55281142..55328064
AA seq 703 aa
MMHARVQGRDCEREDGVRTFPVKCVQPPRIDVSVTPKGASVEMLSNTVVLGWRIVASIVW
SVLLLPICTTVFIIFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVVVIISIFNVEF
YAVVPSIPCSRLALIGKIIHPQQLMHSFVHAAMGMLVAWCAAVITRGQYSFLVVPCTGTE
SLNSPATQTCLNEYHLFSLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSLLL
LVKHSCVESLFLIRNFCIVYYFLGHIPKTWISTAMDLQIDEQFHRPLDTVRGLLNLSLLY
HVWLCGVFLLMTWYISWILFKIFATEAHLFPVQPPFSEESDECLPKVLNSNPPLIIKYLA
LQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQKLVLYQEAAATNG
RLVSSYSVEPKKSNSPEETTFQTPKSSQMTRPPVPPLVKTSLFSSKLSTPDVASPLGTPF
GSSVVNRMAGIFDVNTCYGSPQSSQLVRRGPRLWTSASDQQMTEFSNPSPSTSISAEGKT
ARQPSMICSWIQNKREQVKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHL
VAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRISGSLVDTSYKTLR
FAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgatgcacgcgcgagtccaaggcagggactgcgaacgcgaggacggtgtacggaccttc
cccgtaaaatgtgtacagcccccacgtattgacgtctcggtcacgcctaaaggggcaagc
gtggagatgctgtcgaatacagtggttttgggctggaggatagttgcaagtattgtctgg
tcagtgctgcttctacccatctgcaccacagtatttataatcttcagcagcattgattta
tttcatcctattcagtggctgtctgattctttcaatgatctatatagttcctatgtgatc
ttttacctcctgctgctgtcagtggtagtagtaataataagtatttttaatgtggagttc
tatgcagttgtgccttccattccctgctccagactggcactgatagggaagatcattcac
cctcagcagctcatgcactcattcgtccatgctgcaatgggaatgctggtagcttggtgt
gctgcggtgataaccagaggtcaatacagttttcttgtggttccctgcactggtactgag
agtttaaatagccctgctacacagacctgcttaaatgagtatcaccttttttccctgctg
gctggagcatttatgggctacagctatagtctcctgtattttattaacaacatgaactat
ctgccatttcctatcatacagcaatacaagttcttacgtttcaggagatctctgctcttg
ttagttaagcatagttgcgtggaatcactgttcctgattagaaatttctgcattgtttat
tattttcttggccatattccaaaaacttggattagcactgcgatggaccttcagatagat
gagcagtttcacaggcctcttgacactgtgcgtggcctcttgaatctctcattactctac
catgtctggctttgtggtgtctttcttctgatgacttggtatatctcatggatactcttc
aaaatctttgccacagaggctcatctgttccctgttcagccaccattttcagaagagtcg
gatgaatgcctcccaaaggttttaaacagcaatcctcccctcatcataaagtatttggcc
ttgcaggacctgatgttgctttctcagtattctccttcacgaagacaagaagtttttagc
cttagccaaccaggtggacatccgcacaattggacagccatttcaagggagtgtttgaac
cttttaaatgatatgactcagaaactggttctctaccaagaagcagctgctacgaatggg
agactggtgtcttcatactccgtggaacctaagaaatcgaattctccagaagaaactact
tttcagaccccgaaatctagccagatgactcggcctccagtgccaccattagttaagacg
tcattgttttcctcaaaattatctacacctgatgttgcaagtcccctcggaaccccattt
ggctctagtgtggtgaatcggatggctggaatttttgatgtaaatacctgctatgggtcc
cctcagagttctcagctagtcagaagagggccaagattgtggacttctgcttctgatcag
cagatgactgaattttctaatccttctccatctacctccattagtgctgagggtaagaca
gcgagacaacccagtatgatttgctcatggattcagaataaacgtgaacaggttaagaat
ttcttatcaaaacgggtgttgataatgtattttttcagtaagcacccagaggcctctatt
caggctgttttttcagatgcccaaatgcatatttgggcattagaaggtttgtctcactta
gtagcagcatcatttaccgaagatagatttggagttgtccagactacactaccagctatt
cttaatactttattgacgctgcaagaggcagttgacaagtacttcaagcttcctcatgct
tccagtaaaccacctcggatttcaggaagccttgtggacacttcctataaaacattaaga
tttgcatttagagcatcactaaaaactgccatctatcgaataactactacatttggtgaa
catctgaatgctgtgcaagcatctgcagaacatcagaaaagacttcaacagttcttggag
ttcaaagaatag

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