Canis lupus dingo (dingo): 112647054
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Entry
112647054 CDS
T08371
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03013
Nucleocytoplasmic transport
clud05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112647054 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112647054 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112647054 (NDC1)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112647054 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
112647054
NCBI-ProteinID:
XP_025283464
Ensembl:
ENSCAFG00020011978
LinkDB
All DBs
Position
5:55281142..55328064
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AA seq
703 aa
AA seq
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MMHARVQGRDCEREDGVRTFPVKCVQPPRIDVSVTPKGASVEMLSNTVVLGWRIVASIVW
SVLLLPICTTVFIIFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVVVIISIFNVEF
YAVVPSIPCSRLALIGKIIHPQQLMHSFVHAAMGMLVAWCAAVITRGQYSFLVVPCTGTE
SLNSPATQTCLNEYHLFSLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSLLL
LVKHSCVESLFLIRNFCIVYYFLGHIPKTWISTAMDLQIDEQFHRPLDTVRGLLNLSLLY
HVWLCGVFLLMTWYISWILFKIFATEAHLFPVQPPFSEESDECLPKVLNSNPPLIIKYLA
LQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQKLVLYQEAAATNG
RLVSSYSVEPKKSNSPEETTFQTPKSSQMTRPPVPPLVKTSLFSSKLSTPDVASPLGTPF
GSSVVNRMAGIFDVNTCYGSPQSSQLVRRGPRLWTSASDQQMTEFSNPSPSTSISAEGKT
ARQPSMICSWIQNKREQVKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHL
VAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRISGSLVDTSYKTLR
FAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgcgcgagtccaaggcagggactgcgaacgcgaggacggtgtacggaccttc
cccgtaaaatgtgtacagcccccacgtattgacgtctcggtcacgcctaaaggggcaagc
gtggagatgctgtcgaatacagtggttttgggctggaggatagttgcaagtattgtctgg
tcagtgctgcttctacccatctgcaccacagtatttataatcttcagcagcattgattta
tttcatcctattcagtggctgtctgattctttcaatgatctatatagttcctatgtgatc
ttttacctcctgctgctgtcagtggtagtagtaataataagtatttttaatgtggagttc
tatgcagttgtgccttccattccctgctccagactggcactgatagggaagatcattcac
cctcagcagctcatgcactcattcgtccatgctgcaatgggaatgctggtagcttggtgt
gctgcggtgataaccagaggtcaatacagttttcttgtggttccctgcactggtactgag
agtttaaatagccctgctacacagacctgcttaaatgagtatcaccttttttccctgctg
gctggagcatttatgggctacagctatagtctcctgtattttattaacaacatgaactat
ctgccatttcctatcatacagcaatacaagttcttacgtttcaggagatctctgctcttg
ttagttaagcatagttgcgtggaatcactgttcctgattagaaatttctgcattgtttat
tattttcttggccatattccaaaaacttggattagcactgcgatggaccttcagatagat
gagcagtttcacaggcctcttgacactgtgcgtggcctcttgaatctctcattactctac
catgtctggctttgtggtgtctttcttctgatgacttggtatatctcatggatactcttc
aaaatctttgccacagaggctcatctgttccctgttcagccaccattttcagaagagtcg
gatgaatgcctcccaaaggttttaaacagcaatcctcccctcatcataaagtatttggcc
ttgcaggacctgatgttgctttctcagtattctccttcacgaagacaagaagtttttagc
cttagccaaccaggtggacatccgcacaattggacagccatttcaagggagtgtttgaac
cttttaaatgatatgactcagaaactggttctctaccaagaagcagctgctacgaatggg
agactggtgtcttcatactccgtggaacctaagaaatcgaattctccagaagaaactact
tttcagaccccgaaatctagccagatgactcggcctccagtgccaccattagttaagacg
tcattgttttcctcaaaattatctacacctgatgttgcaagtcccctcggaaccccattt
ggctctagtgtggtgaatcggatggctggaatttttgatgtaaatacctgctatgggtcc
cctcagagttctcagctagtcagaagagggccaagattgtggacttctgcttctgatcag
cagatgactgaattttctaatccttctccatctacctccattagtgctgagggtaagaca
gcgagacaacccagtatgatttgctcatggattcagaataaacgtgaacaggttaagaat
ttcttatcaaaacgggtgttgataatgtattttttcagtaagcacccagaggcctctatt
caggctgttttttcagatgcccaaatgcatatttgggcattagaaggtttgtctcactta
gtagcagcatcatttaccgaagatagatttggagttgtccagactacactaccagctatt
cttaatactttattgacgctgcaagaggcagttgacaagtacttcaagcttcctcatgct
tccagtaaaccacctcggatttcaggaagccttgtggacacttcctataaaacattaaga
tttgcatttagagcatcactaaaaactgccatctatcgaataactactacatttggtgaa
catctgaatgctgtgcaagcatctgcagaacatcagaaaagacttcaacagttcttggag
ttcaaagaatag
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