Canis lupus dingo (dingo): 112647455
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Entry
112647455 CDS
T08371
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03020
RNA polymerase
clud03420
Nucleotide excision repair
clud05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112647455 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
112647455 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
112647455 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clud03021
]
112647455 (POLR2A)
03400 DNA repair and recombination proteins [BR:
clud03400
]
112647455 (POLR2A)
Enzymes [BR:
clud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112647455 (POLR2A)
Transcription machinery [BR:
clud03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112647455 (POLR2A)
DNA repair and recombination proteins [BR:
clud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112647455 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
112647455
NCBI-ProteinID:
XP_025284329
Ensembl:
ENSCAFG00020007929
LinkDB
All DBs
Position
5:32514294..32540031
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagcgg
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagagggcggt
atcaaataccccgagacgacggagggaggccgccccaagcttggggggctgatggaccca
aggcagggggtgattgagcggactggccgctgccaaacctgtgcaggaaacatgacagag
tgtcctggccactttggccacatcgagctggccaagcccgtgtttcacgtgggcttcctg
gtgaagacgatgaaggttttgcgctgtgtctgcttcttctgctccaagttgcttgtggac
tctaacaacccaaagatcaaggacatcctggccaagtccaaggggcagcccaagaagcgg
ctcacccacgtgtatgacctgtgcaagggcaagaacatctgcgaaggcggtgaggagatg
gataacaagttcggggtggagcagcccgagggtgatgaggacttgaccaaagaaaagggc
catgggggctgcggacgataccagccccgcatccggcgctcaggcctggagctgtatgcc
gagtggaagcatgtcaatgaggactcccaggagaagaagatcctgctgagtcctgagcga
gtacatgaaatcttcaagcgcatctcagacgaagagtgttttgtgctgggcatggagccc
cgctacgcccggcctgagtggatgattgtcactgtgctgcccgtgcccccgctgtctgtg
cggcctgccgtggtgatgcagggctctgcccgcaaccaggatgacttgacccacaagctg
gcggatatcgtgaagatcaacaatcagttgcggcgcaatgagcaaaacggtgcagcggcc
cacgtcatcgcagaggatgtgaagctcctccagttccatgtggccacgatggtggacaat
gagctgcctggcctgccccgggccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttgaagggcaaggaaggccgagtccgagggaacctgatgggcaagcgagtggac
ttctcagcccgcaccgtcatcactcccgaccccaacctttccatcgaccaggtcggtgtg
cctcgctccattgctgccaacatgacctttgcagagatcgtcacgcccttcaacatcgac
agacttcaggaattggtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgagacaatggcgatcgcattgacctgcgtttccacccaaagcccagtgaccttcatttg
cagactggctataaggtggaacggcacatgtgcgatggagacattgtcatcttcaaccgg
cagccgactttgcacaagatgtccatgatggggcatcgggtccgcatcctcccctggtct
acttttcgcttaaatctgagtgtaacaactccatacaatgctgactttgatggggatgag
atgaacttgcacctgccacagtctctggagactcgggcagagatccaggagctcgccatg
gtgccgcgcatgattgtcaccccccagagcaatcgccccgtcatgggcatcgtgcaggac
acgctcacagctgtgcgcaaattcacaaagagagatgtcttcctggagcggggggaagtt
atgaaccttttgatgttcttgtccacgtgggatgggaaggtcccgcagccggccatcctg
aagcctcgtcccctgtggacaggcaaacagatcttctccctcatcataccaggccacatc
aactgcatccgcacccacagcacccatcccgacgacgaggacagtggtccttacaaacac
atctctccaggggacaccaaggtggtagtggagaacggggagctgatcatgggcatcctg
tgtaagaaatctctgggtacgtcagccggctcgctggtccacatttcttacctggagatg
ggccatgacgtcactcgtctcttctactccaacattcagacagtcattaacaactggctt
ctcatcgagggtcataccattggcattggggactccattgcggactcaaagacctaccag
gacattcagaacactattaagaaggctaagcaggatgtgatagaggtcattgagaaggct
cataacaatgagctggagcccacccccgggaacactctgcggcagacctttgagaaccag
gtgaaccgcattctcaacgatgcccgagataagactggctcctctgcccagaagtccttg
tctgagtacaacaactttaagtccatggtcgtgtctggggccaaaggttccaagatcaac
atctcccaggtcatcgctgtagtcgggcagcagaacgtggagggcaagcggatcccattt
ggattcaagcaccggaccctgcctcatttcatcaaggatgactacgggccagagagccga
ggctttgtggagaattcctacctggccggcctcacgcctaccgagttcttcttccatgcc
atggggggtcgcgaggggcttatcgacacggccgtcaagactgctgaaactgggtacatc
cagcggcggctcatcaagtccatggagtcggtgatggtgaagtatgatgctactgtgcga
aactccatcaaccaggtggtgcagctgcgctatggcgaggacggcctggctggcgagagc
gtcgagttccagaacctggctacccttaagccatccaacaaggcttttgagaagaagttc
cgctttgactacacaaacgagagggccctgcggcgcactctgcaggaggacctggtgaag
gacgtgctgagcaatgcgcacattcagaacgagttagagcgagaattcgagcgcatgcgt
gaggacagggaggtgctcagggtcatcttcccgactggcgacagcaaggtcgtcctcccc
tgtaacctgctgcgtatgatctggaacgctcagaaaatcttccacatcaaccctcgcctt
ccctccgacttgcaccccatcaaggtggtagagggagtcaaggaattgagcaagaaactc
gtaattgtgaacggggatgaccccctgagcaggcaagctcaggagaatgccacacttctc
ttcaacatccacttgcgctccacactgtgctcccgccgcatggctgaggagttccggctc
agcggggaggccttcgactggctgcttggagagatcgagtccaagttcaatcaagccatt
gcccatcctggggagatggtgggagccctggctgcacagtcccttggagaacctgccacc
cagatgaccttgaatacctttcactatgctggtgtgtctgccaaaaacgtgaccctgggt
gtgccccgactcaaggaactcatcaacatttccaagaagccaaagacgccttcacttact
gtcttcctgctgggccagtctgctcgagatgctgagagagccaaggacattctgtgccgt
ctggaacatacaacattgaggaaggtgaccgccaacacagccatctactacgaccccaac
ccccagagcactgtcgtggcagaggatcaggaatgggtgaatgtctactatgagatgccg
gactttgacgtggcccgaatctcgccctggctcttgcgggtggagctggaccggaagcac
atgacagaccggaagctgaccatggagcagattgctgagaagatcaatgctggtttcggc
gatgacttgaactgcatctttaacgacgacaacgctgagaagctggtgctccgaatccgc
atcatgaacagcgatgaaaacaagatgcaagaggaggaagaggtggtggacaaaatggat
gatgacgtcttcctgcgctgcatcgagtccaatatgctgactgacatgaccctgcagggc
attgagcagattagcaaggtgtatatgcacctgccacagacggacaacaagaagaagatc
attatcaccgaagacggggaattcaaggctctgcaggagtggatccttgagacggacggc
gtgagcctgatgcgggtgctgagcgagaaggacgtggaccctgtccgtaccacgtccaac
gacattgtggagatcttcacggtgctgggcattgaagctgtgcggaaggccctggagcgg
gagctgtaccacgtcatctcctttgacggctcctacgtcaattaccgccacttggcactc
ctgtgtgataccatgacctgccggggccacttgatggccatcacccgccatggtgtcaat
cgccaggatactgggcctctcatgaagtgctcctttgaggaaacggtggacgtgcttatg
gaagcagctgctcacggagagagtgaccccatgaagggggtgtctgagaacatcatgctg
ggtcagctggccccggctggcaccggctgctttgatctcctgctcgatgctgagaagtgc
aagtatggcatggagatccccaccaacatccctggcctgggggctgccggacccactggc
atgttctttggatcggcacctagtcccatgggaggaatttctcctgccatgactccctgg
aaccagggggcaactccagcctatggtgcctggtcccctagtgtcggaagcggaatgacg
ccgggggcagccggcttctctcccagtgctgcgtcagatgccagtggcttcagcccaggc
tactctcctgcctggtctcccacgccgggctcgcctgggtcaccgggcccctccagcccc
tacatcccctcaccaggtggcgctatgtctcccagctactcaccgacatcgcctgcctat
gagcctcgctcccctgggggctatacaccccagagtccctcctattcccctacttcgccc
tcctactcccccacctctccgtcctactctccaactagtcccaactatagtcccacatca
cccagctactccccaacttctcccagctactccccaacttctcccagctactccccaact
tctcccagctactccccaacttctcccagctactccccaacctctcccagctactccccc
acctcgcccagctattcccccacctcgcccagctactcccccacctcgcccagctactct
cccacctcacccagctactcccccacctctcccagctactcccccacatccccaagctac
tcgcccacatccccaagctactcgcccacatccccaagctattccccgacatctccgagc
tactcgccaaccagccctaactattctccaaccagtcccaattataccccgacgtcaccc
agctatagcccaacgtcacccagctactccccaactagtcccaactacacgcccacgagc
cctaactacagcccaacgtctccgagctattctccaacttcccccagctactccccaacc
tcaccaagctactccccatcaagcccacgatacacaccacagtctccaacttatacccca
agctcccccagctacagccccagctcccccagctacagccccacctcgccgaagtacacc
cccaccagtccctcctacagccccagctccccagagtacaccccgacctcccccaaatac
tcccccaccagcccgaaatactcacccacctcccccaagtactcccccaccagccccacc
tactcacccaccaccccaaaatactccccaacatctcctacttactcgccgacctctcca
gtctatacccctacctctcccaagtactcgcctactagccccacctactcgcccacctcc
cccaagtactcacccaccagccccacctactcacccacctcccccaaaggctccacctac
tcacccacttcccctggctactcacccaccagccccacttacagcctcaccagcccagcc
atcagcccagatgacagtgatgaggagaactga
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integrated database retrieval system
