Canis lupus dingo (dingo): 112648480
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Entry
112648480 CDS
T08371
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112648480 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112648480 (SMG7)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112648480 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
112648480 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
112648480
NCBI-ProteinID:
XP_025285826
Ensembl:
ENSCAFG00020015475
LinkDB
All DBs
Position
7:16514586..16607647
Genome browser
AA seq
1225 aa
AA seq
DB search
MRECLKPFYLMRNWMFLQIVIVGENVSYKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTD
SKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRAN
PNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVK
PQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGD
HLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVY
LSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYS
QDEQLCWTQLLALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEA
VVDERQYIWPWLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQ
GITGDKEGQQRQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELTLEDPSEAK
ENLILPETSMIESLSADGNPGLKSVLSTGRNLSNNCDPGEKPMVTFKENIKPREVNRDQG
RSFPPKEVRRDYSKGITITKNDGKKDNSKRKTETKKCTLEKLQETGKQSVAVQVKSQTEL
RKTPVSEARKTPVTQTPSQATNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGS
GYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQPQPPSQ
QSLTSLPAQPTAQSTSQLQVQALAQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWN
PPQVQGPLGKIMPVKQPYYLQSQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPS
EVKVPEFYWDSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLL
PPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFL
SLTGFSLNQERYPNNSVFNEVYGKNLTTSSKSELNPSLAPQETSLYSLFEGTPWSPSLPA
SSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPA
MGGFGIDYLSATSSSESSWHQASTASGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGP
SALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatgtcttaagccattctaccttatgagaaattggatgttcttgcagatagtc
attgtgggagaaaacgtttcatataagtcccagatgaggaccggaaacttgaaatcagag
gagcatctgaaatcaagtaatattaggcaggcagaagtcctgaaggctgatatgacagat
tctaagctgggtccagctgaggtctggacatccaggcaggctctgcaggacctgtaccag
aaaatgctagttactgatttggaatacgctttagacaagaaagtagaacaggatctctgg
aatcatgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagcaaac
ccgaatcggagtgaagttcaggcaaacctttctctgttcctagaggcagctagtggcttc
tatactcagttattacaagaactgtgtacagtgtttaatgtagatttaccatgccgtgtg
aagtcttcccaattgggaattatcagcaataaacagacgcataccagcgccatagtgaag
ccacagtctagttcctgttcttatatctgccagcactgcctcgtccaccttggagacatt
gctcgatacagaaaccagaccagccaggcagagtcctactataggcatgcagctcagctt
gtcccctctaatggtcagccttacaatcagttggctatcttagcttcttccaaaggagac
catctgaccacaattttctactactgcagaagcatcgctgtgaagttccctttcccagct
gcctccacgaatctacaaaaagcactttctaaagcactggaaagccgggatgaggtgaaa
accaaatggggtgtttctgacttcatcaaggcctttattaaattccacggtcatgtgtac
ctgagtaagagcttggaaaagctgagccctcttcgagagaaattggaagaacagtttaag
aggctgctattccaaaaagctttcaactctcagcagttagttcacgtcactgtcattaac
ctgtttcaacttcatcaccttcgtgactttagcaatgaaacggagcagcatagttatagc
caagatgagcagctgtgttggacacagttactggccctctttatgtcttttcttggcatc
ctgtgcaagtgtcctctccagaacaagtctcaggaggagtcctacaatgcctatcctctt
cctgcagtcaaggtctccatggactggctgagactcagacccagggtctttcaggaggca
gtggtagatgaaagacagtacatttggccctggctaatttctcttctaaatagtttccat
ccccatgaagaggatctttcaagtactaatgctacaccacttccagaggagtttgaatta
caaggattcttggctttgagaccttctttcaggaacttggatttttccaaaggccatcag
ggtattacaggagacaaagaaggtcagcaacggcaaatacgacagcagcgcttgatctct
ataggcaaatggattgccgataatcagccaaggctgattcagtgtgaaaatgaggtaggg
aaattgttgtttatcacagaaatcccagagttaacactagaagaccccagtgaagccaaa
gagaacctcattctgccagaaacatccatgatagagtcactatctgcagacgggaaccca
ggactgaaatcagtgctgtccacgggccgtaatctaagcaacaactgtgaccccggagag
aaacctatggtcaccttcaaagagaacattaagccgcgagaagtgaacagagaccaagga
agaagttttcctcccaaagaggtgagaagggactatagcaaaggaattactataactaag
aatgatggaaagaaggacaacagcaagaggaaaacagaaaccaagaaatgcaccttagaa
aagttacaggaaacaggaaagcagagtgtggcagtgcaggtaaaatcccagacagaatta
agaaagactccagtgtctgaagccaggaaaacccctgtaactcaaaccccaagtcaagca
actaactcccagttcatccccattcatcaccctggagccttccctcctcttcccagccgg
ccagggttcccgccccctacatatgttattccccctcctgtggcattttctatgggctca
ggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagctcac
tctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccagcaa
cggccctctggaccagggccaatgaaccagggacctcaacaaccacagccaccttcccag
caatcccttacatctttaccagctcagccaacagcacagtctacaagccagttgcaggtt
caagctctagctcagcaacaatcccccacaaaagctgtgccagctttggggaaaagccct
cctcaccactctggattccagcagtatcaacaggcagatgcctccaaacagctgtggaat
ccccctcaggttcaaggcccattagggaaaatcatgcctgtgaaacagccctactacctt
cagtcccaagaccccataaaactgtttgagccgtcattgcaacctccggtaatgcagcag
cagcctctagagaaaaaaatgaagccttttcccatggagccatataaccataatccctca
gaagtcaaggtcccagaattctactgggattcttcatacagcatggctgataacagagct
gtaatggcacagcaagcaaatatggaccgcaggggcaaacggtcaccaggagtcttccgt
ccagagcaggatcctgtgcccaggatgccatttgaggaccccaagggctcccctctgctt
cctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgattttttct
aaccctcctgatctttacccagctctgctggggcctctcgcctctcttcctggacggagc
ctctttaaatccttgttggagaagccctcggagctcatgtcccattcctcctctttcttg
tccctcaccggattctctctcaatcaggaaagatacccaaataacagtgtgtttaatgag
gtatatgggaaaaacctgacaaccagctccaaatcagaacttaatccttcgctggccccc
caggagacgtcactctattccctctttgaagggaccccctggtctccatcacttcctgcc
agttcagatcattcaacaccagccagccagtctcctcattcctctaacccaagcagcctg
ccaagctcccctccaacacacaaccataattctgttccattctccaactttggacccatt
gggactccagataacagggataggagaaccgcagatcggtggaaaaccgataagccagcc
atgggtgggtttggcattgactatctctcagcaacatcatcctctgagagcagttggcat
caggccagcactgcaagtggcacctggacaggccacggcccctccatggaggattcctct
gctgtcctcatggaaagcctcaagtctatctggtccagttccatgatgcatcctggacct
tccgctctggagcagctgttaatgcagcagaagcagaagcagcagcggggacaaggcacc
atgaaccctccacactga
DBGET
integrated database retrieval system
