Canis lupus dingo (dingo): 112649054
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Entry
112649054 CDS
T08371
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X5
KO
K12879
THO complex subunit 2
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03013
Nucleocytoplasmic transport
clud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112649054 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
112649054 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112649054 (THOC2)
03041 Spliceosome [BR:
clud03041
]
112649054 (THOC2)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112649054 (THOC2)
Spliceosome [BR:
clud03041
]
Complex C
Other components
EJC/TREX
112649054 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112649054 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
112649054
NCBI-ProteinID:
XP_025286898
Ensembl:
ENSCAFG00020002284
LinkDB
All DBs
Position
X:complement(95533181..95663080)
Genome browser
AA seq
1601 aa
AA seq
DB search
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSAAPKGNSSNGNSSS
NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLIGVFNQCNGKL
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccaacaggctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatccaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacgaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttatcaaacaa
tcacagcagtttaatcaaaagtccgttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaaattttaccaggaaccaaatgga
gagactccgtcatctttatacagagttgcagcagtacttctacagtttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtggaagctaagcaaattgttagaaaacttacaatggttgtattgtcttct
gaaaaaattgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaagcttattcacataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggttcacctgttaatgctttgcaaaataagagggcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttcccacgatcccattttatttgcaaaagtggtgcgcattggcaaatcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
taccgtctctatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagcccaaacaatagacagagccaaatatatcatgaagcgtttaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattacgatgttttggcctattgtattattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcctcccagagattaaaggatgcactattggaccatgatcttgctctt
cctctctgtttgcttatggctcaacagaggaatggggtaatcttccaggaaggtggagag
aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacagttt
ggtggttttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctctgtaatgaatttcatacaccccacgatgcagcatttttcctgtctaggcca
atgtatgcacaccatatttcgtccaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcacaagtacattacatcatgtgaaatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattttggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgttgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacaaagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagttgcaagctgtactgaaaatgaagctagtcgatatgga
agatttctttgctgcatgttagagactgtaaccaggtggcacagtgatagagccacatat
gaaaaggaatgtggaaattacccaggattccttactatattacgggcaactggatttgat
ggtggaaataaagcagatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatccgtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtaccccaaagttttgaatctg
ggtcaggctttggaaagaagagtacataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagatccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcttcatcgtcgataggaagtgcatctaaatcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccgcaccgaaagggaattcaagcaatggaaacagtagctct
aacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccgaaggaagagcggccaaataaagatgaaaaagcaagagagacaaaggaaaga
acacccaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaattcaaaaccactgtccccaacgtagaatcaaaatcgactcaagaaaaggaaagagag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttctgggtccttgaagtctcctgttccccgatcagatgtt
gcagagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaa
cggaaaagggatcattcaaacaatgaccgtgaagtgccgccggacttagccaagaggcga
aaagaggaaaacggaacaatgggggtttcaaaacacaaaagtgaaagtccgtgtgagtct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggtggtgattcgtttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaaaaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacaatatccttttcatcttattggagtttttaatcagtgtaatggaaag
ctttga
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integrated database retrieval system