KEGG   Canis lupus dingo (dingo): 112649054
Entry
112649054         CDS       T08371                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X5
  KO
K12879  THO complex subunit 2
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03013  Nucleocytoplasmic transport
clud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112649054 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    112649054 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clud03019]
    112649054 (THOC2)
   03041 Spliceosome [BR:clud03041]
    112649054 (THOC2)
Messenger RNA biogenesis [BR:clud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     112649054 (THOC2)
Spliceosome [BR:clud03041]
 Complex C
  Other components
   EJC/TREX
    112649054 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112649054 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 112649054
NCBI-ProteinID: XP_025286898
Ensembl: ENSCAFG00020002284
LinkDB
Position
X:complement(95533181..95663080)
AA seq 1601 aa
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSAAPKGNSSNGNSSS
NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKEPSRERDIAKEMKSKENVK
GGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLIGVFNQCNGKL
NT seq 4806 nt   +upstreamnt  +downstreamnt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccaacaggctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatccaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacgaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttatcaaacaa
tcacagcagtttaatcaaaagtccgttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaaattttaccaggaaccaaatgga
gagactccgtcatctttatacagagttgcagcagtacttctacagtttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtggaagctaagcaaattgttagaaaacttacaatggttgtattgtcttct
gaaaaaattgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaagcttattcacataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggttcacctgttaatgctttgcaaaataagagggcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttcccacgatcccattttatttgcaaaagtggtgcgcattggcaaatcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
taccgtctctatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagcccaaacaatagacagagccaaatatatcatgaagcgtttaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattacgatgttttggcctattgtattattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcctcccagagattaaaggatgcactattggaccatgatcttgctctt
cctctctgtttgcttatggctcaacagaggaatggggtaatcttccaggaaggtggagag
aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacagttt
ggtggttttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctctgtaatgaatttcatacaccccacgatgcagcatttttcctgtctaggcca
atgtatgcacaccatatttcgtccaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcacaagtacattacatcatgtgaaatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattttggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgttgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacaaagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagttgcaagctgtactgaaaatgaagctagtcgatatgga
agatttctttgctgcatgttagagactgtaaccaggtggcacagtgatagagccacatat
gaaaaggaatgtggaaattacccaggattccttactatattacgggcaactggatttgat
ggtggaaataaagcagatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatccgtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtaccccaaagttttgaatctg
ggtcaggctttggaaagaagagtacataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagatccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcttcatcgtcgataggaagtgcatctaaatcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccgcaccgaaagggaattcaagcaatggaaacagtagctct
aacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccgaaggaagagcggccaaataaagatgaaaaagcaagagagacaaaggaaaga
acacccaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aaattcaaaaccactgtccccaacgtagaatcaaaatcgactcaagaaaaggaaagagag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttctgggtccttgaagtctcctgttccccgatcagatgtt
gcagagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaa
cggaaaagggatcattcaaacaatgaccgtgaagtgccgccggacttagccaagaggcga
aaagaggaaaacggaacaatgggggtttcaaaacacaaaagtgaaagtccgtgtgagtct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggtggtgattcgtttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaaaaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacaatatccttttcatcttattggagtttttaatcagtgtaatggaaag
ctttga

DBGET integrated database retrieval system