Canis lupus dingo (dingo): 112649781
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Entry
112649781 CDS
T08371
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clud03036
]
112649781 (SHOC1)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112649781 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
112649781
NCBI-ProteinID:
XP_025288006
Ensembl:
ENSCAFG00020022562
LinkDB
All DBs
Position
11:complement(65800824..65882311)
Genome browser
AA seq
1506 aa
AA seq
DB search
MFSAFKYCAIDYLYETVVRKKFHRDALLLRIPSCLYQDGNYYGEVIDDKFRRPWMRVSAV
SVWGMTDTSVLDQWKASLFVEEFLEKKTVTGMMTEIDYGFEEIVPSSNPNSPIEIEEASL
YTDTDYNEVFTPIGGLEKCSTLQTQNKDLYIDEEILFVNNLMTYKSQLPTVHTLLSRLKP
FLIKDPILDFKEQIFTEANFFREHFSFQGDLKSLVKEDFYMHKENFCQEKLEDTPSILSE
CEFLISTSSKQEADIPSLSELKESLNLVPEIINYADENELFKRDLTAKHGSDIEDIKCSS
TEILAIQSHCEPEYSEPVELEMPLTHLHLTNQPSSVTSLCTRLQTFPFSPVCKINLLSAE
ESAHKYWMMWQLESCRSSLNPFLFTVPRTEEPRSQCSVTDLKKIFSIEEESLVVNPISTE
WWKEGGLNLIETETLELLNTYLSGNDLSSSDTTMEIFLPTKLLQLESSLEHKSCSSPIEL
IDEKSTNDHLLLSQNISSPAKEVSDLCFSDDNLSVKQPTKEENPKNDLEPVYRISENKEN
EDYLELDCAVPSDELSSSPKIEKASFKHGKKWENDLDLLSDFIMLRNKYKTCTSKTEVTG
NKENDEFQDKEEPSLTLQEASPIVCTHKALEKMNQERRADNVIEIQASDSQCQAFCLLEA
AATPIFKKLECLCTLPAADWTFATVIFDQTRFFLKEQEKVISDAIQQGTNHEKEMTFKHA
ALLHLLVTIRDVLLTCGLDTALGYLSTAKDIYRNILGSYLDDIWRQLEIIQFIREKNPET
NYKIQELQCQILNWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVIHSNKRKD
VLESEGVLNGTSSCIIVHNQHIGADFPWTNFSFVVEYNFVENSCWTEHCKKLNIPHRAFK
VILPDTVLKRSTLLDSFGGFLLEIQVPYVFFASEGLLNTPEILQLLESKYNITLVERCCS
ESLKLFGGTECYVVVTIDEHTAVMLQDLEELNCEKASDNIIMRLLALSFQYSYCWIILYT
KKTLNSEYHLTEKTLHHLALIYAALVSYGLKSEELDVKLIIAPGVEEAALIIRQIADHNL
MTSKRDPQEWLDKSWVEVSPSKEEMYLLDFPSINPLVAQLMLNKGPSLHWILLATLGQLQ
ELLPEVPEKVLKHFCSITSLFKISSSSITNSPQSPSPQENGNQTNTFTSQSSASGSSNSV
FQEHNEFYHYSDIGETVYEDTNSTSNSKSSLMELREMPCVLPPMTSYSQASYWKDSSCNA
NIVHNPFLINTESRTVTGNSFQNQNDSESDVFYLDLTQMSCENITSPIDTQKRVAPNFIS
YQEKGTHDAKGPIKKGAYASNFSLEGAQSPLPWNFKKNVWKQQNHSFNLEYGADQTTCDK
WFSQKDNLFTNQQKYPSDELEGLIYESSNDETKKTFWKELPSVPSLDFFCAADPNVNQKE
FSSLYFHQGAGKCLGQKRHSESSSNSGDKKSLPDFMCSQLPQFKKRRLVYEKVPGRADGQ
TRLRFF
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcattcaaatattgtgcaatagactatttatatgagactgtagttagaaag
aagtttcacagagatgccttactgcttcgaatcccttcatgtttatatcaagacggaaat
tattatggagaagttattgatgacaagtttaggaggccatggatgagagtttcagctgtt
tcagtgtggggaatgacagatacctcagtcttggatcaatggaaagcaagtctctttgtg
gaggagtttctagagaaaaaaacagttacaggaatgatgaccgagattgactatgggttt
gaggaaattgttccaagttcaaacccaaactctccaatcgaaatagaggaagccagttta
tatactgatacagactataatgaagtctttacacctattggcggtttagaaaaatgttca
acacttcaaacacagaacaaagatttatatattgatgaagaaatactttttgtaaataac
ttgatgacatataaaagtcagctaccaactgtgcatactctgttgagtaggctaaaacca
tttttgataaaggaccccattttagatttcaaagaacagatcttcacagaagctaatttc
ttcagggaacatttctcatttcaaggagatttgaaaagtcttgtgaaagaagatttttac
atgcataaagagaacttttgtcaggaaaagctagaagatacaccatcaattttgtctgag
tgtgaattcttaatatctacaagctccaaacaagaagctgatattccatcactctccgaa
ctgaaggaatcattaaacttagttccagaaataataaattatgcagatgaaaatgaactt
ttcaaaagagatcttactgccaagcatggaagtgacattgaggatataaaatgcagctcc
acagaaattttggccattcaaagccattgtgaaccagagtatagtgaaccagtggagtta
gaaatgccattaactcatctacatctaacaaaccaaccttcttccgtgacttcattatgt
acaagacttcagacatttccattttctcctgtttgtaaaattaatttgctttctgctgaa
gaatcagctcacaagtactggatgatgtggcagttagaaagctgcagaagctctttgaac
ccatttttgtttacagtgccaagaactgaagagccccgcagccaatgttcagttacagat
ttgaaaaagatattttctattgaagaagaaagccttgtagttaatcctataagcacagag
tggtggaaagaaggaggactaaatctgatagaaacagaaactttggaacttctgaatacg
tatttgtctggtaatgatttatcttctagtgatactacaatggagatatttttgccaaca
aaactacttcaattagaatcatcgctagaacataaaagttgttcctcacctattgaactt
attgatgagaaatctacaaatgatcatttattactttcacaaaatatttcatctccagca
aaagaagtatcagacttgtgtttttctgatgataatttatctgttaagcaaccaacaaaa
gaagaaaacccaaagaatgatctagaaccagtttacagaataagcgaaaataaagaaaat
gaagattacttggaacttgactgtgcagtaccatctgatgaattatcttcctctccaaaa
attgaaaaagcatcttttaaacatggtaaaaaatgggagaatgatttggatcttttgagt
gactttattatgctgagaaataaatataagacttgtacctccaagactgaagtcacaggc
aataaagaaaacgatgaatttcaagataaagaagaaccttctttgactcttcaggaagca
agtcctattgtttgtactcataaagctctagagaaaatgaatcaggaaaggagagcagat
aatgtcattgaaattcaagcatcagatagccagtgccaagcattctgtctcctagaagca
gcagctactcctatctttaaaaagcttgaatgcctctgtactctccctgctgctgattgg
acatttgccactgtcatttttgaccaaacaaggttcttcttaaaggagcaagaaaaagta
ataagtgatgctattcagcaaggtacaaaccatgaaaaagaaatgacgtttaaacatgct
gctctcttacatcttctggtaacaattagagatgtccttttaacgtgcggcttggacaca
gcattgggatatttgtcaactgcaaaagatatctacagaaacattttaggctcctatttg
gatgacatttggagacaattggagatcatacagtttattagggaaaaaaatcctgaaacc
aactacaagatacaagaactacaatgtcagatactaaattggatgcaaagtgaacaacag
attaaggtgctgattataataagaatggactcagatggtgaaaagcatttactcatcaaa
attcttaacaaaatggaaggtttaacattgactgtcatacattcaaacaaaaggaaagat
gttctggaatctgaaggtgttttaaatggtacaagttcctgcataattgtacataatcaa
catattggagcagatttcccatggactaacttctcatttgtggtggaatacaattttgta
gagaactcctgttggaccgaacactgcaagaaattgaatattcctcacagggccttcaaa
gtgattcttccagacacagttttaaagagaagtaccttgctggatagttttggtggtttt
cttctggaaattcaggttccatatgtgttttttgcatctgaaggacttcttaatactcca
gaaatacttcagttgctagaatccaaatataatatcacactagtggaaagatgctgcagt
gagtcattgaaactctttggaggtacagagtgttatgtggtggtgacaattgatgaacac
actgccgtaatgttgcaggacctagaagaattgaattgtgagaaggcatcagacaatatc
attatgagactgttggcattatcattccagtacagctattgttggataatcttatatacc
aaaaaaacattaaactcagagtaccatctaacagaaaaaacacttcatcatctagcactg
atttatgcagctttggtatcatatgggctaaaatcagaagaactggatgtaaagcttata
attgccccaggagtggaagaggctgcactgataattcgacaaattgctgatcacaattta
atgacctcgaagagagatcctcaagaatggttggataaatcctgggttgaagtctcacca
tcaaaggaggaaatgtatttacttgattttccatctattaacccactggtggctcagctc
atgttaaataaaggaccttcactgcactggatattattagcaactctgggtcaacttcag
gagcttttacctgaagttccagaaaaagtgttaaagcatttttgcagcatcacttcctta
ttcaagattagttcttcatccataacaaactcacctcaaagtccatcacctcaggaaaat
gggaatcagactaatacctttacctcccagagttcagcttctggctcttcaaactctgtc
tttcaagaacataatgaattttaccactattcagacataggagagacagtgtacgaagat
acaaacagtacttcaaactctaagtcttcacttatggaactaagagaaatgccatgcgtt
ttaccacctatgacttcttacagtcaagccagttactggaaagattccagttgtaatgct
aacatagtacataatcctttcctgattaatacagaatcaagaactgtgactggtaactcc
tttcaaaaccagaatgattcagagtcagatgtcttttatttggatctaacacaaatgagc
tgtgaaaacataacatcaccaattgacactcagaagagagttgcccctaattttataagt
tatcaggaaaagggaacacatgatgcaaaagggcctataaaaaaaggagcatatgcctct
aacttttctctagaaggcgctcaatctcctcttccctggaactttaagaaaaatgtatgg
aaacaacagaatcactcattcaacttagagtatggtgcagatcagactacatgtgacaaa
tggttctctcagaaagataatttattcactaatcagcaaaaatatccatcggatgagtta
gaaggcctcatatatgaaagttcaaatgatgagactaaaaagactttctggaaagaatta
ccatctgtccctagtttggatttcttttgtgctgctgatcctaatgtaaatcaaaaagaa
ttcagcagtctttatttccaccaaggagctggaaaatgtttaggacagaaaaggcactct
gaatcctcatctaactcaggagacaagaaatcattaccagatttcatgtgctcacaacta
ccacaattcaaaaaacggcggctagtgtatgaaaaagtccctggtagagctgatggacaa
actcgtctgaggtttttttga
DBGET
integrated database retrieval system
