Canis lupus dingo (dingo): 112650438
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Entry
112650438 CDS
T08371
Symbol
ABCA1
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud02010
ABC transporters
clud04148
Efferocytosis
clud04975
Fat digestion and absorption
clud04979
Cholesterol metabolism
clud05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112650438 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112650438 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
112650438 (ABCA1)
04979 Cholesterol metabolism
112650438 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112650438 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clud02000
]
112650438 (ABCA1)
Transporters [BR:
clud02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
112650438 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
112650438
NCBI-ProteinID:
XP_025288941
Ensembl:
ENSCAFG00020020013
LinkDB
All DBs
Position
11:complement(60278512..60406986)
Genome browser
AA seq
2261 aa
AA seq
DB search
MASWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDIHEVLMTLQQVESFSSSLKLQDFLVDNETFSGFLIHNLSLPRLTVDKMLEANVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGEQEVSTLCSLPKEKLDAAEQVLRSSMDILKPIL
TELNSTSPFLSNQLAKATKTLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDAGSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDMQGMWEELS
PKIWTFMESNPEMDLVRTLLDSRSNDHFWEQRLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWAGIVFTG
ITPGSIELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTERKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDSGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKLFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDAFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGVSEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMNTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDVDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDMSTQELLNALTRDPGFGTRCMEGNPIPDVPCSVGEEEWTTAP
VPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQVKK
HLKLAKDSSADRFLSNLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPIKAKFPPLNDEDEDVKRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSD
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSSPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctggcctcagctgcgcctgctgctgtggaagaacctcaccttcagaagaagg
cagacatgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tccgtgcggctgagctacccgccctatgagcaacatgagtgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttggattcaggggattatctgtaatgccaataacccc
tgcttccgctatccgactcctggtgaggcccctggggtggttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggctccttttatatagccagaaagacacc
agcatgaaggacatacacgaggttctgatgacgttacagcaggttgagagtttcagttca
agcttgaaacttcaggatttcctagtggacaatgaaaccttctctggattcttgatacac
aacctttctctgccaaggctcactgtggacaaaatgctggaggctaatgtcagcctccac
aaggtatttctgcaaggctaccagttacatttgacgaatctgtgcagtggatcgaagtta
gaagaggtgattcaacttggtgaacaagaagtttccacgctttgcagcttgccaaaggag
aagctggatgcagcagagcaagtgcttcgttccagcatggacatcctgaagccgatcctg
acagaactaaactctacatctcccttcctgagcaaccaattggctaaagccacaaaaact
ttgttggatagtctcgggactctggcccaagagctgttcagcatgaacagctggagcgac
atgcgccaggaggtcatgttcctgaccaacgtgaacagctccagctcctccacccagatc
taccaagctgtgtcccgcattgtctgtggccaccccgagggggggggcctcaagatcaag
tccctcaactggtacgaggacaacaactacaaagccctctttggtggcaacggcacggac
gaagatgctggcagcttctatgacaattctacaactccttattgcaatgatctgatgaag
aatttggagtctagtcctctttcccgcatcatctggaaagctctcaagcctctgcttgtt
gggaagatcctgtatacacctgacacgccagccacaaggcaggttatggccgaggtgaat
aagacctttcaggagctggctgtgtttcatgatatgcaaggcatgtgggaagagctcagc
cccaagatctggaccttcatggagagtaacccagaaatggaccttgttcggacactgttg
gacagcagaagcaatgaccacttttgggaacagcgattagatggcttagactggactgcc
aaagatatcctggcatttctggccaagcacccagaggatgtccagtctgctaatggatct
gtgtacacctggagagaagccttcaatgagaccgaccaggcaattcagaccatctctcga
ttcatggagtgtgtcaacctgaacaagctggaaccagtagcaacagaagtccggcttatc
aacaagtctatggagttgctggatgagaggaagttctgggctggtatcgtgttcaccgga
atcactccgggcagtattgagctgccccgtcacgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggacccgggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggctttgcctacttgcaagatgtggtg
gagcaggcgatcatcagggtgctgacgggcaccgagaggaaaactggcgtctatgtgcaa
cagatgccctacccctgttacgtcgatgacatcttcctgcgggtgatgagccggtccatg
cctctgttcatgacgctggcctggatctactccgtggccgtgatcatcaagggcatcgtg
tacgagaaggaggcacggctgaaggagaccatgcgcatcatgggtctggacagcggtatc
ctctggttcagctggttcatcagtagcctcatcccgctgctcgtgagcgccggcctgctg
gtggtcatcttgaaattaggaaacctgctgccctacagcgaccccagcgtggtgtttgtc
ttcctgtctgtgttcgccgtggtgaccatcctgcagtgcttcctcatcagcacactcttc
tccagggccaacctggcggcagcctgtgggggcatcatctacttcatcctatacctgccc
tacgtgctgtgcgtggcgtggcaagactatgtgggcttcacactcaagctctttgtgagc
ctgctatctcctgtggcctttgggtttggctgtgagtactttgccctttttgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccccatggaggaagatggcttcaac
ctcaccacgtcagtctccatgatgctgttcgacgcctttctctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatccccagaccctggtattttccttgc
accaaatcctactggtttggtgaggaaagtgatgagaagagccaccctggttccagccag
aagggagtatcggaaatctgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgtggatggcctggcc
ttgaatttctatgagggccagattacctccttcctgggccacaatggagctggaaagacc
accaccatgtcaatcctgactgggttgttccctcccacctcgggcactgcctacatcctg
gggaaagacattcgctttgagatgaacaccatccggcagaacctgggagtctgcccccag
cataatgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgtcta
aaggggctctcagagaagcacgtgaaagcagagatggagcaaatggccttggatgttggt
ttgccacccagtaaactgaaaagcaaaacaagtcagctgtcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gccggtgtggacccttactcccgtaggggaatatgggagctactgctcaaatatcgacaa
ggtcgcaccattattctctccacacaccacatggatgaagcagacatcctgggggacagg
attgccatcatctcccatgggaagctgtgctgcgtgggctcctccctgtttctgaagaac
cagctgggaacaggctactacctgaccctggtcaagaaggatgtggaatcctccctcagt
tcctgcagaaacagcagtagcactgtgtcatatctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgctatctccaacctcatcaggaagcatgtggctgaggcccggctggtggaagacatt
gggcatgagctgacttacgtgctgccctacgaagctgccaaagagggggccttcgtagaa
cttttccatgagattgatgaccggctctcagacctgggcatctctagttacggcatctcg
gagacgaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgctgag
acctcagacggcaccttgccagcaagacgaaacagacgagcctttggggacaagcagagc
tgtcttcgcccattcactgaagatgatgccattgatcctaatgattctgatgtagatcca
gaatccagagaaacagacctgctcagcgggatggacggcaaaggctcctaccaggtcaag
ggctggaaactcacacagcagcagtttgtggcacttctgtggaagaggctgctgattgcc
agacggagtcggaagggattctttgctcagatcgtcctgccagctgtgtttgtctgcatt
gctctggtgttcagcctgattgtgcccccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaacgaacagtacacatttgtcagtaacgacgctcctgaggacatgagc
acccaggaactcttgaatgccctcaccagagaccctggcttcgggacccgatgtatggaa
ggaaatccaatcccagacgtgccctgctccgtgggggaggaggagtggaccaccgcccca
gttccccagaccatcacagacctcttccaaaatgggaactggacgatggagaatccctca
cccacgtgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtcccctgggg
gcagggggcctgcctcccccacagagaaaacagaacactgcagacatccttcagaacctg
acgggaagaaacatttcggactatctggtgaagacctatgtgcagatcatagccaaaagt
ttaaagaacaagatctgggtgaatgagtttaggtatggaggattttccctgggtgccagt
aattctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtgaagaag
cacttgaagctggccaaggacagttctgcagatcgatttctcagtaacttggggaggttc
atgacaggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggctggcat
gccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaaccccagccagtatgggattactgctttcaatcaccccctgaatctcaccaag
cagcagctctcggaagtggctctgatgaccacatccgtggatgtcctggtgtccatctgt
gtcatctttgcaatgtccttcgtcccggccagcttcgttgtgttcctgatccaagagcgg
gtcagcaaagcaaagcacctgcagttcatcagtggcgtgaagcctgtcatctactggctc
tccaattttgtgtgggatatgtgcaactatgtggttcctgccacgctggtcattatcatc
ttcatctgcttccagcagaagtcctacgtgtcctctaccaacctgcctgtcctagctctt
ctactgctgctgtacgggtggtccatcacacctctcatgtacccagcctccttcgtgttc
aagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggcatcaac
ggcagtgtggccacttttgtgctggagctctttaccaacaataagctgaataacatcaat
gatatcctgaagtctgtcttcttgatctttccacatttttgcctgggacgggggctcatt
gacatggtgaaaaaccaggcaatggctgatgccttggaaaggtttggggagaaccgtttt
gtttcaccactgtcttgggacttagtgggacgaaacctcttcgccatggccgtggaaggg
gtggttttcttcctcatcactgttctaatccagtacagattcttcatcaggcccaggcct
atcaaagcaaagtttccccctttgaatgatgaggatgaagatgtgaagcgggaaagacag
agaattcttgatggtggaggacagaatgacatcttggaaatcaaggagctgactaagata
tatagaagaaagaggaagcctgctgttgacaggatatgcgttggcattcctcctggcgag
tgctttggacttctaggagttaatggggctgggaaatcatcaactttcaagatgttaact
ggagataccactgttaccagaggagatgctttccttaacaaaaacagtatcttatcagat
atccatgaagtgcatcagaacatgggctattgccctcagtttgatgccatcacggagtta
ctgaccggaagagagcacgtggagttctttgccctcttgagaggagtcccagagaaggaa
gttggcaaggttggtgaatgggcaattcggaaactgggcctcgtaaagtatggagaaaaa
tatgctggtaactatagtggaggcaataagcgcaagctctcgacagccatggctctgatt
ggtgggcctcccgtagtctttctggatgaacctaccacaggcatggatcctaaagcccga
cgattcttgtggaattgtgccttaagtattgttaaggaagggagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
aggttcaggtgccttggcagcgtccaacatctgaaaaataggtttggagatggttataca
attgttgtacgaatagcaggatccagccctgatctgaagcctgtccaggagttctttgga
cttgcctttccaggaagtgttctaaaagagaagcaccggaacatgctacagtaccagctt
ccatcttcattatcttctctggccaggatattcagcatcctttcccagagcaaaaagaga
ctccacatagaagactattctgtttctcagacaacacttgaccaagtatttgtaaacttc
gccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaagaaccagaca
gtagtagatgtcgcagttctcacatctttcctccaggatgagaaagtgaaagaaagttac
gtatga
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integrated database retrieval system
