Canis lupus dingo (dingo): 112650575
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Entry
112650575 CDS
T08371
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03013
Nucleocytoplasmic transport
clud03015
mRNA surveillance pathway
clud03040
Spliceosome
clud05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112650575 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
112650575 (NCBP1)
03015 mRNA surveillance pathway
112650575 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112650575 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112650575 (NCBP1)
03041 Spliceosome [BR:
clud03041
]
112650575 (NCBP1)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
112650575 (NCBP1)
Spliceosome [BR:
clud03041
]
Common components
Common spliceosomal components
Cap binding complex
112650575 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
112650575
NCBI-ProteinID:
XP_025289196
Ensembl:
ENSCAFG00020017997
LinkDB
All DBs
Position
11:54405235..54441570
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgacggaggacagcctcacaaaaggagaaag
acctcggatgccaatgaaactgaagatcatttggaatccttaatatgcaaagtaggagaa
aagagtgcctgctctctggagagcaacctagaaggcttggcaggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgcctgttacct
gagaagttgacaatttatacaacattagttggactgctgaatgccaggaattacaatttt
ggtggagagtttgtagaagctatgattcgtcagcttaaagaatcactgaaagcaaacaac
tataatgaagctgtatatttggtccgttttttatctgatcttgtgaattgtcatgtcatt
gctgccccatccatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcggcgagattggtatgtgtatgcctttctgtcatctttgccctgggtt
ggaaaggagttatacgaaaagaaagatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaaaacacatgtgcccatgttacaagtatggactgctgag
aaaccacacccgcaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcattgcaacacaatctgcctccttttacaccacctccgcacacggaagattca
gtgtacccgatgccaagggtcatcttcagaatgtttgattacacagatgatcccgaaggt
cctgtaatgccagggagtcattcagttgaaagatttgtaatagaagagaatcttcactgc
atcattaagtctcactggaaggaaaggaagacttgtgctgcacagttggtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatttttgcagagctgttt
cagcttccagcacccccgcacattgatgtgatgtacacaacactgcttatcgagctgtgc
aaactccagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacgatgaacactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgttagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaacaaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgatgatgatgatgaagggttcagctttaac
ccactgaaaatagaggtctttgtacagactctgctacacttggcagccaaatcattcagc
cactcctttagtgcccttgcaaagtttcatgaagtcttcaaaaccctagctgagagtgat
gaaggaaagttacatgttctaagagttatgtttgaggtctggaggaaccatccacagatg
attgctgtactagtagataagatgatccgtacacagattgttgactgcgctgcggtggct
aattggatcttctcttcagaactgtcacgagactttactagattgtttgtttgggaaatt
ttgcactccacaattcgtaagatgaacaaacacgttctcaaaatccagaaagagctagaa
gaagctaaagaaaaacttgcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctctagaggagcaaatagaaagactgcaggaaaaagtagaa
tctgctcagagtgaacagaagaacctcttccttgtcatattccagcgatttatcatgatc
ttgactgagcacttagtacgatgtgagactgacgggaccagtgtattaaccccatggtat
aagaactgtatagagaggctccagcagatcttcttacagcatcaccaaataatccagcag
tacatggtgaccctggaaaacctgctcttcactgctgagttagaccctcatatcctggct
gtgttccagcagttctgtgccctacaggcctaa
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