Canis lupus dingo (dingo): 112651332
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Entry
112651332 CDS
T08371
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112651332 (SOX30)
Transcription factors [BR:
clud03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112651332 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112651332
NCBI-ProteinID:
XP_025290246
Ensembl:
ENSCAFG00020025579
LinkDB
All DBs
Position
4:53018769..53047760
Genome browser
AA seq
790 aa
AA seq
DB search
MERARPEPPPQPRQLPRTTPPRPLRPAPPQPPVEGASFRAGAAELPPSPPTPCAAAIATV
ASSCGEAQASGVQPAARRLLQVKPEQVLLLPPGPPLAQARDEGGVPSLAQARLLQLRPEL
LLLPPPPPPPPPASDGAPCRPDLHAAQPRALLVKAEKQEQGPGSEPSPSAGTRRPADGGP
RASRAAKLEGPGPALDGRRGDQKKGRLEAEAVTRDAPKGGEGKNLAAVREGVIKTEEPEG
PREDCRLGGEPASNGLVHGSKEVILAQPSSAFGPHQQDLRIPLTLHAVPPGARIQFQGPP
PSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKR
PMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHRE
EFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTIT
HPVGFLEEAGKEEAHGSTYSDAPPAIQLPTPAVQRPSPISLFQPSVSSTAQVAVQAPNLP
LRPALPPQHFAGPSQTDTHRLHSGASCSVKRPTPVSLENTNRIPTSASTAHARFATSTIQ
PPKEYPSVSTCPRSAPIPQAPPIPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHY
FPSSTCPYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSE
DSRSCESMDGTSYYNSHSHSGEEYLNPMPQLDIGALENVFTAPTSTSSSIQQVNVTDSDE
EEEEKVLRNL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagagggccaggccggagccgccgccccagccgcgccaactgccgcggacgaccccg
ccgcgcccgctccgccctgctcctccccagccgccggtcgagggcgcctccttccgggct
ggggccgcggagctgccgccgtcgccgcctaccccgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcggggaggcccaggcgtcgggggtacagcccgcggcacggcggctgctg
caggtgaagcccgagcaggtgctgctgctcccgccggggccgccgctggctcaggcccgg
gacgaaggcggcgtcccctcgctcgcgcaggcgcggctgctgcagctgaggcccgagctg
ctgctgctgccgccgccgccgccgccgcccccgcccgcgtccgacggcgccccctgcaga
cccgacttgcacgcggcgcagcctcgggccctgctcgtcaaggcggagaagcaggagcag
gggcccggctcggagccgtcgccgtcggcggggacgcggaggcctgcggacgggggccct
cgggcctccagggcggccaagctggaaggcccggggccagctctcgacggccgccggggg
gaccagaagaagggcaggctggaggcggaggcggtcacgagggacgcgccgaaaggcggg
gaaggcaaaaacctggcggccgtcagagaaggggtcatcaaaacggaggagcccgagggg
ccccgcgaggactgcagactgggcggggagcccgcgtccaatggcctggtccatggcagc
aaggaggtcatcctggcccagccgtccagcgcctttgggccccaccagcaggatctcagg
atccctctgactctccacgcggtcccccctggggcccggatccagtttcagggacctcca
ccttcagagctgatacggttgaccaaggtccccttgacgccagtgcctattaaaatgcaa
tctttactggagccttctgtaaaaattgagaccaaagatgtcccgctcaccgtgcttccc
tcagatgcaggaataccagatactcccttcagtaaggacagaaatggtcatgtgaagcga
cccatgaatgcatttatggtttgggcaaggattcaccggccagcactagccaaagctaac
ccagcagccaacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagt
gaagaacaaaagaaaccctattatgatgaagcacaaaagattaaagaaaagcacagagag
gagtttcctggttgggtttatcaacctcgtccagggaagcgaaaacgcttccctctaagt
gtttccaatgtattttctggtaccacacagaatatcatctctacaaatcctacaacaata
tatccttatcgctcacctacctactctgtggtaattcccagcctacaaaacaccatcact
catccagttggtttccttgaggaagcaggaaaggaagaagcacatggttcaacatatagt
gatgccccacctgccatccagctgcccacacctgcagtccagcgcccaagccccatctca
cttttccagcccagcgtctccagtactgcccaggtggccgtccaggctccaaatctgccc
ctccgcccagcactcccaccccagcactttgctgggccctcccaaacagacactcatcgg
ctgcattctggagccagttgctctgtgaagagacccacgcctgtctctctggagaacacc
aacaggattccaactagtgcaagtactgcccatgccagatttgcaacctcaaccatccaa
cctcctaaggagtatcccagcgtttccacttgtcccagaagtgcaccaatcccccaggct
cctcctattccacactcacacgtataccaggctcctccccttggccatccagccacgttg
tttgggacaccgccgcgattctcttttcatcacccttacttcctacctggaccgcactat
ttcccatcaagcacgtgcccttatagtcggcctccctttggctatggaaattttccaagt
tcaatgccagaatgccttggttattatgaagacagataccaaaaacatgaggctatgttt
tcagctttaaatagagactatccttttagagactacccagatgaacgtacacacagtgaa
gattctcggagttgtgaaagcatggatgggacctcttactataatagtcatagtcacagt
ggggaagaatacttaaatcccatgcctcagctggacattggagccttggagaatgtcttc
acagccccaacatcaacttcctctagcatccagcaagtcaatgtcactgacagtgatgaa
gaggaagaagaaaaagtgctcagaaatttataa
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