KEGG   Canis lupus dingo (dingo): 112652020
Entry
112652020         CDS       T08371                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
clud  Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:clud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clud03019]
    112652020 (GEMIN5)
   03041 Spliceosome [BR:clud03041]
    112652020 (GEMIN5)
Messenger RNA biogenesis [BR:clud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     112652020 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     112652020 (GEMIN5)
Spliceosome [BR:clud03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    112652020 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd DSE1_N WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR75_1st WD40_Gbeta WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_NOL10_N PAC11 ASA1 MIOS_WD40 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 DNAI3_WD
Other DBs
NCBI-GeneID: 112652020
NCBI-ProteinID: XP_025291269
Ensembl: ENSCAFG00020023889
LinkDB
Position
4
AA seq 1508 aa
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPSAGAIPGTPPFRVVGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDAETKTVVTEHALHQHTISALHWSPQ
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEENSEEPEIPNGKVIAQTPVTNGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTIKERLWLTLHWPKDQPTQLV
SSCFGGELLLWDLTQSWRRKFTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWNMATLECCWTLPSLGGFAYSLAFSPVDMGCLAIGVGDGMIRIWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PLPPIALGEGDRPSLTLYSCGGEGIVLQHNPWKLGGEAYDINKLIRDANSIKYKLPVHTE
ISWKADGKIMALGNEDGSIEIFQVPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLMA
SGSNNAVIYVHNLKSVIESNPESPVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASYD
GTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLTSMQEHSRPP
QGKKSIELEKKRLSQPKPKPKKKKKPTSRAPIKQEVCDGNEDESIRESSGPVENGVSDQE
GEEEAREPEFPGGVASVASREPVTCTPVSSGFDKSKVTINNKVTLLKKEPPKEKPESLTK
KRKARSMLPLTTSLDHRSKEELHQDCLVLATAKHSKAELNEDMSADLDERFHLGLFTDRA
ALYRMIEVEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDTLVAMAPVAGYQV
WLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAVAKARLRPEDP
ILKDLYLTWGAILEKDGHYAVAAKCYLGAASAYDAAKVLAKKGDAASLKTAAELASIVGE
DELSSSLALRCAQELLLARNWVGAQEALKLHGSLKGQRLVFCLLELLSKHLEERQLSEAK
SSSYNAWAAGIEGPFVERVTAVWKSAFSLDTPEQYQAALQQLQSIKYPSATNNTPSKQLL
LHICHDLTLAVLSQQVASWDAAVEALLRAVIRSYDSGNFTIMQEVHSAFLPEGCGHLRDK
LGEHQSPTIPAFKSLEAFFIYGHLYEFWWSLSRPSPKSSVWVRAAQRRTTSIEQSEQINS
ASPEETDPKVSEPEPSRPPELDVRLTEASKQILITCKELFSEKHASLQNSQRTVAEVQET
LAEMIRQHQKSQVCKSTTNGPDENESEQVAEQSLSSPQRECKEEKNQPLSLPELTKRLTE
ANERIAKFPESIKTWPFPDVLECCLILLHIGSQCPGSVTQDMQQQAQELLQKYGNTKVYK
RYCQTFCT
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgggacaggagccgcgcacgctgccgccctctcctaactggtactgcgcccgctgcagc
gatgcggtgcccgggggcctcttcggcttcgcagcgcggacctccgtcttccttgtgcgc
gtgggcccaagcgctggcgcgatccctgggacgcccccatttcgagtcgtaggggagttg
gtgggacacaccgaaagggtctctggcttcacattttctcatcatccgggtcaatacaac
ctctgcgccaccagctctgatgatggaactgtgaaaatctgggatgcggaaacaaaaaca
gttgtgacagaacatgcactccatcagcatacaatatcagcactgcattggtctcctcaa
gtaaaggatttaatagtatctggagatgaaaaaggagtagttttctgttactggcttaac
cgaaatgacagccagcacctctttatagaacccaggacaattttctgtcttacttgctca
cctcatcatgaagatttagtagccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttattcacaggcttcgaggccatgatgatgagatccactcc
atagcctggtgtcccctgcctggtgaagactgtttatccattaatcaagaagaaaattca
gaagaacctgaaatccccaatggtaaagttatagcacaaactccagtaacaaacggctgc
tacttagccactggaagcaaagatcagaccattcgaatctggagctgctctagaggccga
ggggtgatgattttgaaattgccctttctgaagagaagaggagggggtatagacccaact
attaaagaacgcctttggttgacactccattggcccaaggatcaaccaacacagctggta
tccagctgttttggaggtgagctgttgctgtgggatctcactcagtcttggagacggaaa
tttaccctctttagtgcttcatcagaagggcagaatcattcaagaattgtgtttaactta
tgccctttacaaactgaggatgacaaacagctgctgctttccacgtcgatggatagagat
gtaaaatgttggaatatggccaccctcgagtgctgctggaccctcccttccctaggtggg
tttgcctacagcctggctttctctcctgtggacatgggctgtttggccataggtgttggg
gatggcatgatccgcatatggaatacactctccatcaagaacaactatgatgtgaaaaat
ttttggcagggtgtcaagtccaaggttacagcgctctgctggcacccaaccaaggaaggc
tgcttagcttttggaactgatgacgggaaagtgggattgtatgacacctactccaacaaa
cctccacagatttctagcacatatcataagaagactgtgtacactttagcctgggggccg
ccactaccccccattgcactcggagaaggagacagaccttccctcactttatatagctgt
ggaggggaagggattgtcttacagcataacccctggaagcttggtggagaagcctatgat
atcaacaaactcatcagggacgccaactcaatcaaatacaaattgcctgtacacacagag
atcagctggaaagcagatggaaaaatcatggctcttggcaatgaagatggatcaatagaa
atatttcaggttcccaacctgaaactgatatgtaccatccagcagcatcacaaacttgtg
aataccattagctggcatcatgagcatggcagtcagccggagctgagctatctgatggcc
tctgggtccaacaacgcggtcatttatgtgcataacctaaaaagtgtgatagagagcaat
cctgaatctccagtgaccattacagagccctaccggaccctgtcagggcacacagccaag
attaccagtgtggcttggagcccgcatcatgatggaaggctggtatctgcttcctatgat
ggtacagctcaggtgtgggatactctccgagaagagcctctgtgcaatttccgaggacat
cgaggtcgactgctttgtgtggcatggtccccactggatccagactgcatctactcaggg
gcagatgacttctgtgtgtacaaatggctcacttccatgcaagaacattcccggcctcct
caaggtaagaaaagcattgaattagagaaaaaaaggctctctcaacctaagccaaagccc
aaaaagaagaaaaagcccacctcaagagctcctataaagcaggaagtatgtgatgggaat
gaagatgagagcatcagggagagctcgggacctgttgagaatggcgtgtcggaccaggag
ggcgaggaggaagcccgggagccagagtttcctggtggtgttgcctcagtggcttctaga
gaaccagttacctgcactccagtttcatcaggctttgacaagtcaaaagtcaccattaat
aacaaagtcactttactgaagaaagaaccacctaaagagaagccagaatccttaaccaag
aagcgaaaagctcgttccatgcttccattgactaccagcctggaccacagatctaaagag
gagctccatcaggactgtttggtattagcaactgcaaaacactccaaagcagaactaaat
gaggatatgtctgctgatcttgacgaaagatttcacctggggctttttacagaccgggcg
gccctgtacagaatgattgaggttgaaggaaagggtcacttggaaaatggccaccctgag
ttatttcaccagctcatgctttggaaaggagatctcaaaggtgttcttcagactgcagca
gaaagaggagagctgacagacactcttgtagctatggcaccagttgctggctaccaagtg
tggctgtgggctgtggaagcttttgccaaacagctgtgttttcaagatcagtatgtcaag
gctgcctctcatctactttctatccacaaagtatatgaagctgtagagctgctcaagtca
aaccatttttacagggaagctattgcagttgccaaggcccgactgcgcccagaggaccca
atcctgaaggacctgtacctcacctggggagccatcctggaaaaagatgggcattatgct
gtagccgccaaatgctatttaggggctgcttctgcttatgatgcagccaaagttttggcc
aagaagggagatgcagcatcacttaagacggctgcagagttggcttcaattgtaggagag
gatgagttgtcctcttccctagctctccggtgtgcccaggaactgcttttggccaggaac
tgggtgggagcccaggaagccctgaagctacatggaagtctaaaggggcagagactggtg
ttttgccttcttgagctactgtccaagcacctggaggaaagacagctttcagaggccaaa
agctcttcctacaatgcttgggctgcaggcatcgaaggcccctttgtggagagggtgact
gctgtatggaagagcgccttcagcctggatactccagagcagtatcaggcagcactacag
cagctgcaaagtatcaagtatccatccgctacaaataacactccctccaaacagcttctg
cttcacatttgccatgacctgaccttggcagtgctgagccagcaagtggcctcctgggac
gcggctgtggaagccctacttcgggctgtgatccggagctatgactcaggaaacttcacc
atcatgcaggaagtgcactcagcctttcttcctgagggctgtggccacctaagagacaaa
ctgggtgaacatcagtcccccaccataccagctttcaaaagtttggaggccttttttatt
tatggacatctgtatgaattctggtggtctttatccaggcctagccctaaatctagtgtc
tgggtaagagctgctcagagaaggacaacctctattgagcaaagtgagcagataaacagt
gccagccctgaagaaactgaccctaaagtgtctgaaccagagccaagcaggcctccagaa
ttagatgtgagactcacagaagcaagcaagcaaatcctgatcacttgtaaagagctcttt
tcagaaaagcacgccagtctccaaaactcacagagaaccgttgctgaagtccaagagacc
ttggcagaaatgatccgccaacaccagaagagtcaagtctgtaaatctacaacaaatggt
cctgatgagaatgaatctgaacaagtagcagaacagtccctttctagtcctcagagggag
tgtaaagaagaaaaaaatcagccactttctctgcctgaattaaccaaaaggcttacagag
gcaaatgagagaatagctaaatttcctgagagtattaagacctggcccttcccagatgtg
ctggagtgctgtcttatcctgcttcacattgggtcccagtgtcctggcagcgtgacccag
gacatgcagcaacaggcccaagagctccttcagaaatatggcaacactaaagtttacaaa
agatactgccagaccttctgcacatga

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