Canis lupus dingo (dingo): 112653070
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Entry
112653070 CDS
T08371
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112653070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112653070
03036 Chromosome and associated proteins [BR:
clud03036
]
112653070
Enzymes [BR:
clud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112653070
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112653070
mRNA degradation factors
5'-3' decay
Decapping complex
112653070
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112653070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
112653070
NCBI-ProteinID:
XP_035570041
LinkDB
All DBs
Position
3:60279830..60282097
Genome browser
AA seq
482 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGSPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKWELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDVIKKGAAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLRKPCEINL
MEELTLKGVTQYYAYVTERQKVLCLNTLFSRLQINQSIIFCNSSQRVELLAKISLLGYSC
FYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFPRGIDIQAVNVVINFDFPKLLETYLHR
IGRSGRFGHLGLAINLITYDDRFNLKNIEEQLGTEIKPIPSNIDKSLYEAEYHSEPVEDE
KP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctttccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtagccccggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaataccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaatgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaagcacatgggaggggccaaagtgatggcaaccaca
ggaggaaccaatttacgggatgacataatgaggcttgatgacacagtgcacgtggtgata
gctacccctggaagaatcctggatgttatcaagaaaggagcagcaaaagttgatcatgtc
cagatgatagtattggatgaggcagataagttgctttcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacagacagattttattatattctgctactttc
cctcttagtgtacagaagttcatgaattcccatttgcggaaaccctgtgagattaacctg
atggaggaactaactttgaagggagtaacccagtactacgcctatgtaactgagcgccaa
aaagtactctgcctcaacacacttttttccaggcttcagataaaccagtcgatcattttc
tgtaactcctctcagcgagttgaattgctagccaagatttctctactgggttattcttgc
ttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtatttcatgatttccga
aatggcttatgccgcaatcttgtttgcactgatttgtttccccgaggtattgatatacaa
gctgtgaatgtggtaataaactttgacttcccaaagctgttagagacctatctccatcgt
attggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacatatgat
gatcgcttcaacctgaaaaatattgaggagcagctgggaacagaaattaaaccgatccca
agcaacattgacaagagcctgtatgaggcagaataccacagcgagcccgtggaggacgag
aagccctaa
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