Canis lupus dingo (dingo): 112653153
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Entry
112653153 CDS
T08371
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clud03021
]
112653153 (CHD1)
03036 Chromosome and associated proteins [BR:
clud03036
]
112653153 (CHD1)
Transcription machinery [BR:
clud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112653153 (CHD1)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112653153 (CHD1)
SLIK complex
112653153 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
112653153
NCBI-ProteinID:
XP_025292848
Ensembl:
ENSCAFG00020011541
LinkDB
All DBs
Position
3:11171161..11244640
Genome browser
AA seq
1798 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQHPASSNSGSE
EDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEEERDKSSCDETESDY
EPKNKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEA
QRLSGAGGSKRRKARAKKNKAMKSIKVKEEMKSDSSPLPSEKSDEDDDKDEITSVKHPNK
KIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRE
NKVKEAIQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQK
TFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIK
QWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYK
QESRYYSDREKHRKLDDHRSRDHRSNLEGSIKDRSHSDHRSHSDHRLHSDHRASSEYTHH
KSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctcgggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatccggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccccagtattctggctgttcagaggtcagca
atgctcaagaagcagcagcagcagcagcagcatccagcttcatccaatagtggatcagag
gaggattcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaaaag
cataaagatgaagattggcaaatgtctgggtcaggatctccatctcagtctggttcagat
tcagaatctgaagaagaagaaagagataaaagcagttgtgatgaaacagaatctgattat
gagccaaaaaacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatggg
aagaaaattcttggacaaaaaaagagacagattgattcatctgaggaggaagatgatgaa
gaagattatgataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctat
aaagaagatgaagaaatgaaaacagattctgatgatctattggaagtctgtggagaggat
gttcctcaacctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggatt
gggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccaaatgcaggatttgagaaaaacaaggaaccaggagagatccagtatttaattaaatgg
aaaggatggtcccatatccacaatacttgggagacagaagaaacccttaagcagcagaat
gttagaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattacaattgccagcaagaacttacagat
gatctacataaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtca
gcagctggttatcctgattattattgcaaatggcagggccttccatactcagaatgcagc
tgggaagatggagctctaatttccaaaaagtttcaagcctgcatagatgagtattttagc
aggaatcaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaaga
tttgtagccctaaagaagcagccgtcctatattggaggacatgaaagtttagaattaaga
gattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgt
atacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcacgaacatcaattatatggaccttttctgttagtagtaccactctccaccctt
acttcctggcaaagagaaattcagacatgggcttctcaaatgaatgctgtggtttattta
ggtgacattaacagcagaaatatgatacggactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatacttttaacaacttatgaaattttactgaaggataaggcattc
cttggaggtctaaactgggcgtttataggtgtagatgaagcgcatcgattgaagaatgat
gactctcttctgtataaaactttaatagactttaagtccaatcaccgtctccttattact
ggaactcctctacaaaactccctcaaagagctctggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatgggaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagatgtg
gaaaaatctcttcctgccaaagttgagcagattttaagaatggaaatgagtgctttacag
aaacagtattacaaatggatattaactaggaattataaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaa
cgaggcaatagagttcttattttttcccaaatggtgcggatgttagatatacttgcagaa
tatttgaaataccgtcaattcccctttcaaagattagatggatcaataaagggggagctg
agaaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacaagagctggaggcctaggaattaatttagcctctgctgacactgttgttatattt
gattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
cagaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggatata
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcagagaatggacacg
acggggaagacagtactacatacaggttctgctccctcaagttccactcctttcaataaa
gaggaattatcagccattttaaagtttggtgctgaagaactttttaaggaacctgaagga
gaagaacaagagccccaggaaatggatatagatgaaatcttgaagagagctgaaactcat
gaaaatgaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgcc
aacttttcaaatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaat
tgggaggaaataattccagaagatcaaagaagacgattagaagaggaagaaaggcaaaag
gaacttgaagaaatttatatgctcccgagaatgagaaactgtgcaaaacagattagtttt
aatggaagtgaagggaggcgcagtagaagtaggagatattctggatctgatagtgactca
atctcagaaaggaaaaggccaaagaaacgtggaagaccacggactattcctcgagagaat
atcaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggt
ggccctctggaaagattagatgcaattgctcgggatgctgaattagttgataagtcagaa
acagacctcagacgactaggagaattggtgcataatggttgcattaaagctttaaaggat
aattcttcaggaacagagcgaacaggtggtcgacttggaaaagtaaagggtccaacgttc
cgaatatctggagtacaagtgaatgccaagctcgtcatctcccatgaagaagaattaata
ccattgcacaaatccattccttcagatccagaagaaagaaagcagtatactatcccatgc
cacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtttaacacacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttg
cagacacgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagct
cagagactttctggtgcaggagggtcaaagaggagaaaagcaagagctaagaagaataaa
gcaatgaagtctataaaagtgaaagaagaaatgaagagtgattcttcacccctgccttca
gagaagtccgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaa
aaaattaaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaagaag
gaatcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggag
ataaaagaaaaagaggataagaaagatataaaagaaaaagattttaaagagaaaagagaa
aacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgaacgaa
tccaagtctgagagcaaggaaagatccaagaaatcttcagtgtcagatgctccggttcat
atcactgcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaag
acattcagcatttgtaaggaaagaatgaggcctgtcaaagcagctttgaaacaacttgat
aggcctgaaaaaggcctttcagaaagagaacaactggagcatactagacagtgtttaata
aaaattggagaccatatcacagaatgtctaaaagagtatacaaatcctgaacaaatcaag
cagtggagaaaaaacctgtggatttttgtatctaagtttacagagtttgatgccagaaaa
ttacataaattatataaacatgctattaaaaaacggcaggaatctcagcaaaataatgac
cagaacagcaacttgaatgctcaagtgattagaaatccagatgtggaaagattaaaagag
aatacaaatcacgatgatagtagcagggacagttattcatctgatagacacttatctcag
tatcatgatcatcataaagaccggcatcagggagattcttacaaaaagagtgactctagg
aaaagaccctattcttcttttagtaatggtaaagatcatcgtgactgggatcattacaag
caagaaagcaggtattacagtgatagagagaaacacagaaaactggacgatcacaggagt
agagatcacaggtcaaatttggaaggaagtataaaggatagatctcattctgatcatcgt
tctcattcagatcatcggttacattcagaccatcgggcaagttctgagtatacacaccat
aaatcttccagggattataggtatcactcagattggcaaatggaccacagagcttccagt
agtggccccagatcaccactagatcagagatctccttatggctccagatctccatttgaa
cattcaattgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
