Canis lupus dingo (dingo): 112655086
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Entry
112655086 CDS
T08371
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04151
PI3K-Akt signaling pathway
clud04510
Focal adhesion
clud04512
ECM-receptor interaction
clud04611
Platelet activation
clud04820
Cytoskeleton in muscle cells
clud04926
Relaxin signaling pathway
clud04933
AGE-RAGE signaling pathway in diabetic complications
clud04974
Protein digestion and absorption
clud05146
Amoebiasis
clud05165
Human papillomavirus infection
clud05205
Proteoglycans in cancer
clud05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112655086 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112655086 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112655086 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112655086 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
112655086 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
112655086 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
112655086 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
112655086 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112655086 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
112655086 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
112655086 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112655086 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112655086 (COL1A1)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112655086 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
112655086
NCBI-ProteinID:
XP_025295726
Ensembl:
ENSCAFG00020023500
UniProt:
A0A8C0R6K8
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All DBs
Position
9:complement(27347771..27365072)
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AA seq
1460 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD
NGNVLCDDVICDETKNCPGAQVPPGECCPVCPDGEASPTDQETTGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPS
GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER
GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR
GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSE
GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS
GPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPP
GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP
GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP
GAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVP
GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP
GLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEA
GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA
GPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE
GGKGARGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP
GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP
GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGAR
GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP
GSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP
PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM
CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKEKRHV
WYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL
KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAP
LDVGAPDQEFGMDIGPVCFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
ctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgcgac
aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggcgcc
caagtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctaccgac
caagaaaccacaggagtcgagggacccaaaggagacaccggcccccgaggtccaagggga
cctgccgggccccctggccgagatggcatccccggacagcctggacttcccggaccccct
ggacctcccggaccccctggaccccctggcctcggaggaaactttgctccccaaatgtct
tatggctatgatgagaaatcaactggaggaatctccgtgcctggccccatgggtccttct
ggtcctcgtggtctccctggcccccctggcgcacctggtcctcaaggtttccaaggcccc
cctggtgaacctggcgagcctggagcctcaggtcccatgggtccccgtggtccccctggc
ccccctggcaagaacggagatgacggtgaagctggaaagcctggtcgtcctggtgagcgt
gggcctcctgggcctcagggtgctcggggattgcctggaacagctggccttcctggaatg
aagggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggt
cccaagggtgagcctggtagccccggtgaaaatggagctcctggccagatgggcccccgt
ggtctgcccggtgaaagaggtcgccctggagcccctggccctgccggtgctcgtggaaac
gatggtgctactggtgctgctgggccccctggtcccactggccccgctggtcctcctggc
ttccccggtgctgttggtgctaagggtgaagctggtccccaaggagcccgtggctctgaa
ggtccccagggcgtgcgtggtgagcccggcccccctggccctgctggtgctgccggccct
gccggaaaccccggtgctgatggacagcctggtgctaaaggtgctaacggcgctcctggc
attgctggtgctcccggcttccccggtgcccgaggcccctctggaccccagggccccagc
ggtcctcctggtcccaagggtaacagcggtgaacctggtgctcccggaaacaaaggagac
actggtgccaagggagagcccggccccactggtattcaaggtccccctggccctgctggg
gaagaaggaaagcgaggagcccgaggtgaacctggacccactggcctgcccggaccccct
ggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggtgtcgctggtccc
aagggtcccgctggtgaacgtggttctcctggtcccgctgggcccaaaggttctcctggt
gaagctggtcgccctggtgaagctggtctgcctggtgccaagggtctgactggaagtcct
ggcagccccggtccagatggcaaaactggcccccctggtcccgctggtcaggatggtcgt
cccggacccccaggcccccctggtgcccgtggtcaagctggtgtgatgggattccctggg
cctaaaggtgccgctggagagcctggcaaggctggagagcgtggtgtccctggcccccct
ggtgctgttggtcctgctggcaaagatggagaagcaggagctcaggggccccctggccct
gctggccccgctggcgagagaggtgaacaaggtcctgctggctcccccggattccagggt
ctccctggccctgctggtcctcccggcgaagcaggcaaacctggtgaacagggtgttcct
ggcgaccttggtgcccccggcccctctggagcaagaggcgagagaggctttcctggtgaa
cgtggtgtgcaaggtccccccggtcctgcaggtccccgaggagccaacggtgcccctggc
aatgatggtgctaagggtgatgctggtgcccctggagccccaggtagccagggcgctcct
ggccttcagggaatgcctggtgaacgaggtgcagctggtcttcctggccctaagggtgac
agaggtgatgccggtcccaaaggtgctgatggttctcctggcaaagatggtgtccgtggt
ctgactggccccattggtcctcctggccctgctggtgcccctggtgacaagggtgaagct
ggtcctagcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgag
cctggtccccctggtcctgctggcttcgctgggccccccggtgctgacggccaacctggt
gctaaaggtgaacccggtgatgctggtgctaaaggcgacgctggtccccctggccctgct
ggacccactggacctcccggccccattggtaacgttggtgctcctggacccaaaggtgct
cgtggcagcgccggtccccctggtgctactggtttccctggtgctgctggccgcgtcggt
ccccccggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaa
ggcggcaaaggcgcccgtggtgagactggccctgctggacgtcccggtgaagtcggtccc
cctggtccccctggccctgctggcgagaaaggatcccctggtgctgatggacccgctggt
gctcccggcactcccggacctcaaggcattgctggacagcgtggtgtggtcggtctgccc
ggtcaacgaggagaaagaggcttccctggtcttcccggcccctctggcgaacctggcaaa
caaggtccttctggagcaagtggtgaacgtggtccccctggtcccatgggcccccctgga
ttagctggaccccctggcgagtctggacgggagggatctcctggtgctgaaggctcccct
ggacgagatggttctcctggccccaagggtgaccgtggtgagaccggccctgctggaccc
cctggtgcccccggtgcccctggtgctcctggccctgtcggccctgctggcaagaacggt
gaccgcggtgagactggtcctgctggtcctgctggcccaatcggccctgttggtgctcgt
ggtcctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggtgac
agaggcataaagggtcaccgtggcttctctggtcttcagggtcctcctggccctcccggc
tctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccccct
ggctctgctggttctcctggcaaagacggactcaacggtctcccaggccccattggcccc
cccggtcctcgtggtcgcactggtgatgccggtcctgttggtccccccggccctcctgga
ccccctggtccccccggtcctcccagcggcggtttcgacttcagcttcctgccccagcca
cctcaggagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtggtc
cgtgaccgtgacctcgaggtagacaccaccctcaagagcctgagccagcagatcgagaac
atccggagccctgaaggaagccgcaagaaccctgcccgcacctgccgcgacctcaagatg
tgccactccgactggaagagcggagaatactggattgaccccaaccaaggatgcaacctc
gatgccatcaaggttttctgcaacatggagacaggtgagacctgcgtataccccactcag
ccccaggtggcccagaagaactggtacatcagcaagaaccccaaggagaagagacacgtc
tggtacggcgagagcatgaccgacggattccagttcgagtatggtggccagggctccgat
cctgccgatgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccag
aacatcacctaccactgcaagaacagcgtggcctacatggaccagcagaccggcaacctc
aagaaggccctgctcctccagggttccaacgagatcgagatccgggccgagggcaacagc
cgcttcacctacagtgtcacctacgacggctgcacgagtcacactggagcctggggcaag
acagtgatcgaatacaaaaccaccaagacctcccgtttgcccatcatcgatgtggcacca
ttggacgttggcgccccagaccaggaattcggcatggatattggccctgtctgcttcctg
taa
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