Canis lupus dingo (dingo): 112655392
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Entry
112655392 CDS
T08371
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112655392 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clud03400
]
112655392 (LIG3)
Enzymes [BR:
clud01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112655392 (LIG3)
DNA repair and recombination proteins [BR:
clud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
112655392 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
FMP23
FAD_binding_1
Motif
Other DBs
NCBI-GeneID:
112655392
NCBI-ProteinID:
XP_025296267
Ensembl:
ENSCAFG00020014031
UniProt:
A0A8C0R0X8
LinkDB
All DBs
Position
9:complement(39539536..39560297)
Genome browser
AA seq
991 aa
AA seq
DB search
MTLAFKILFPPTFRALRRKELCLFREPHHWPDIRQFSHWSERGLLHGSCLLQRRKPVLSF
QEGSLRPRATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHVKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKATGTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEA
RSSPTPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSRSFPPAAKSLLTIQEVDKFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMT
PVQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLSERRKFLHDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADMADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFA
VAAGEEGSSTTGGSSSGGENGGVSGPAGASKAKKVGGRPSSPNDRGGHKLIAKPSPVKVG
QKRKAPDEASCPAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMASATHV
LGSGDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccaccaaccttccgcgcactcaggcgaaaagaa
ttgtgcctgttccgagagccacatcactggcctgacataagacagttcagccattggtca
gaaagaggtctgcttcatgggtcctgcctcctccagagaagaaagcctgttctgtcattc
caggaaggcagtctaagaccacgtgccacctgccttgtttttttgccagggtcgcatgtg
ggactctgcagtgggccctgtgagatggctgagcaacggttctgtgtggactatgccaag
cgtggcacggctggctgcaaaaaatgcaaagaaaagattgtgaaaggtgtatgccggatt
ggcaaagtggtgcccaatcccttctcagagtccgggggtgatatgaaagagtggtatcac
gttaaatgcatgtttgagaaattggagcgggcccgggccaccacaaaaaaaattgaggac
ctcacagagctggaaggctgggaagagctggaagataatgagaaggaacagataagccag
cacattgcagatctgtcttctaaggcaacaggaacaccaaagaagaaagctgtcgtccag
gctaagctgacagccactggccaggtgacctctccagtgaaaggtgcctcatttgtcacc
aataccaatccccggaaattttctggtttttcagccaagcccaacaactctggggaagcc
cgctcaagccctacccctaaggcaagtttgtcctcaagcagatgtgatcccaagcacaag
gattgtctgctacgtgagtttcggaagctgtgtgccatggtggctgagaatcctagctac
aacacgaagacccagatcatccaggactttcttcggaaaggttcagcaggagatggtttc
cacggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaagagtgtttac
aacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagat
gatatggcacgggacctagagcagggcgacgtgtcagagacaatcagagtcttctttgag
cagagcagatctttccccccagctgccaagagccttcttaccatccaggaagtggacaaa
ttcctccttcagctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggac
atcgcctccaggtgtacagccaatgaccttaagtgcatcatcagattgatcaaacacgat
ctgaagatgaactcgggtgcaaaacacgtgttagatgcccttgaccccaatgcctatgaa
gccttcaaagcctcacgcaacctgcaggatgtggtcgagcgggtcctccgcaacgagcag
gaggtggagaaggagccaggccagagacgagctctgagtgtccaggcttccttgatgacg
ccagtgcagcccatgctggccgaggcctgcaagtccatcgagcatgcgatgaagaagtgt
cctaacggcatgttttccgagatcaagtacgatggggaacgagtccaggtgcataagaac
ggggatcacttcagctacttcagccgcagccttaagcctgtgctgcctcacaaggtggcc
cactttaaggactacatcccccaggctttccctgggggccacagcatgatcttggactcc
gaggtgctcctgatcgacacgaagacaggcaaaccgctgccctttgggactcttggagtg
cacaagaaagctgccttccaggatgctaatgtctgcctttttgtttttgattgtatctac
ttcaatgatgtcagtttgatggataggcctctctctgagcgccggaagtttcttcatgac
aacatggtggaaattcccaaccggatcatgttctcagaaatgaagcaagtcactaaagct
tcagacttggtcgacatgataaaccgggtcatccgagaggggctggaagggctggtgctg
aaggacgtgaagggtacctatgagcctggaaagcggcactggctgaaagtgaagaaagac
tatttgaatgagggggccatggctgatatggcggacctggtggtccttggggccttctat
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccaagt
agccagaagtggtgcacggtcaccaagtgttcaggaggccatgatgatgcgacccttgcc
cgcctgcagaaggaactggacatggtaaagatcagcaaggatcccagcaaaatacccaac
tggctgaaaatcaacaagatctactatcctgacttcatagtcccagacccaaagaaagct
gctgtgtgggaaatcacgggggctgagttctccaggtctgaggctcacacggccgatggg
atctccatccgattccctcgttgtacccggatccgtgacgataaggactggaaatctgcc
actaaccttccccagctcaaggaactgtaccagctgtccaaggagaaggcggacttcgct
gtggcggctggagaggagggaagctccaccacagggggcagcagcagcggcggagagaac
gggggtgtctcggggcctgctggggctagcaaggccaagaaggtgggagggaggccgagt
agccccaatgacagaggcggccacaagttgatagccaaaccttcccctgtgaaagtgggg
cagaagcggaaggctcccgatgaggcttcatgcccagcaaaggtgctgctggacatcttc
actggcgtgcggctctacctgccaccctctacgccagacttcagccgtctcagacgctac
tttgtggcattcgatggggacctggtgcaggaatttgacatggcatcagccacacatgtg
ctgggtagcggggacaagaaccctgaggctcagcaggtctccccggagtggatttgggcg
tgtatccggaaacgaaggctggtagctccctgctag
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