KEGG   Canis lupus dingo (dingo): 112655645
Entry
112655645         CDS       T08371                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03013  Nucleocytoplasmic transport
clud03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112655645 (CASC3)
   03015 mRNA surveillance pathway
    112655645 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clud03019]
    112655645 (CASC3)
Messenger RNA biogenesis [BR:clud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112655645 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 112655645
NCBI-ProteinID: XP_025296619
Ensembl: ENSCAFG00020018882
LinkDB
Position
9:complement(23568990..23593359)
AA seq 703 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHESSYRSRRLEQTPVR
DPSPEADAEVLGSPEKEEAVSEIPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPPVPETTPPPPAKTGNWEASVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRSMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgca
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagctggagcccttcat
ctgcggcgggtggagagcgggggggccaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggagtatagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaactcttcagccaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatgggcaggagagcacagaacctgtggagaac
aaagtgggtaaaaaaggccctaagcatttggatgatgatgaagatcgaaagaacccagca
tacataccccggaaaggactcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgaaggtcgctgggaacac
gacaagtttcgagaagatgaacaagctccaaagtcccgacaggagctcattgctctttat
ggctatgacatacgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattgttgagcggccaaacaag
tcccatcgccaccagggtcctgggggtaccctaccaccaaggacatttatcaacaggaac
gctgcaggtactggccgaatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaagctggtgggcagcacggtggccgatctggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgagg
gacccatctccagaagctgatgctgaagtgctcggcagtcccgagaaggaagaggcggtc
tcagagataccagctgctgcccctgatactgcaccaccagcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaacccagcacctccagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggcttcagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaacataacagaacagaactggagtccagggcaa
ccttcgttcctgcaaccacgtgagcttcgaagtatgcccaaccatatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcctctcagcggcaaagacctgtaccagagccccctgctcctcctgtgcacatc
agtatcatggaaggccattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagctacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctgtatcctaatacacaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa

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