Canis lupus dingo (dingo): 112656117
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Entry
112656117 CDS
T08371
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04151
PI3K-Akt signaling pathway
clud04382
Cornified envelope formation
clud04510
Focal adhesion
clud04512
ECM-receptor interaction
clud04820
Cytoskeleton in muscle cells
clud04926
Relaxin signaling pathway
clud04933
AGE-RAGE signaling pathway in diabetic complications
clud04974
Protein digestion and absorption
clud05146
Amoebiasis
clud05165
Human papillomavirus infection
clud05200
Pathways in cancer
clud05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112656117 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112656117 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112656117 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112656117 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112656117 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
112656117 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
112656117 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112656117 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
112656117 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112656117 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
112656117 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112656117 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clud04147
]
112656117 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112656117 (COL4A1)
Exosome [BR:
clud04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112656117 (COL4A1)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112656117 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112656117
NCBI-ProteinID:
XP_048955325
Ensembl:
ENSCAFG00020021128
UniProt:
A0A8C0L4T7
LinkDB
All DBs
Position
22:complement(58635695..58777346)
Genome browser
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP
PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDSGYPGLPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGVSLPGPSGRDGLPGPPGLPG
PPGQPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDMAGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI
GPPGPPGFGPIGPVGDKGQAGFPGIPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFQ
GPQGDRGFPGTPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG
LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGPPGLQGI
RGDPGPPGLQGPKGAPGVPGIGPPGAVGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG
LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGEQGISGFPGSPGE
KGEKGSAGVPGIPGSPGPKGLPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGQ
PGPTGPAGQKGEPGSDGIPGSVGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP
GIPGSKGEPGFLGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPG
LDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGAKGDQGDQGFPGSKGLPGPPGPPGPYDIVKGDPGLPGPEGPAGLKGLPGPPGPK
GQQGVTGSVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtgtggctgctgctgctgcccgccgccctcctgctccacgag
gagcgcagccgggccgccgccaagggtggttgtgctggctctggatgtgggaagtgtgac
tgccatggagtgaaaggacagaagggtgaaagaggactcccagggctgcaaggtgtcatc
gggtttcctgggatgcaaggacccgagggaccacaggggccaccaggacaaaagggtgat
actggagaacccggactgcctggaacgaaagggacaaggggacccccaggagcatcgggt
taccctggaaacccaggactgcctggcattcctggccaagacggcccccccggtcctcca
ggtatccctgggtgcaatggaacaaagggtgagccagggcctctagggcccccgggtttg
cctggattcgctggaaatcctggaccaccggggttaccaggaatgaagggagatccaggt
gaaatcattggccatgtgcctgggaccctgctgaaaggcgaaagaggatttcctggaccc
ccaggaacaccaggctcaccgggactgccggggttgcaaggtcctgttggccctccagga
tttactggaccaccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaagggccaaaaggtgacaagggtgaccaaggggtcagtgggccgcca
ggagtgccaggacaagctcaagttcaagaaaaaggagactttgccactaaaggagagaag
ggtcaaaaaggtgaacctggatttcaggggatgccaggggttggagagaaaggtgaacct
ggcaaaccagggccccgaggaaaacctggaaaagatggtgaaaagggagaaaaagggagt
ccaggctttccaggcgactcggggtatccgggactcccaggccgtgaaggtttcaaggga
gacaaaggtgaagcaggtcctccaggcccacccggcattgccatcggccctggacccttg
ggagagaaaggagagcgtgggtacccgggtgccccagggttgagaggagagccaggcccc
aaaggtttcccaggattgcaaggccagccaggccctccaggcttcccagttccaggacag
gctggtgctcctggcttccctggtgagagaggagagaaaggtgaccaggggtttccaggt
gtatcattgccaggaccaagcggacgggatggactcccaggcccccctgggcttcccggg
ccccctggacagccaggccacacgaacggcattgtggaatgccagcctggaccaccaggg
gatcagggtcccccgggaattccagggcagccagggctgacgggcgaagtcggagaaaaa
ggtcagaaaggagacagctgcctcgtctgtgacatggcaggacttcgggggccccctggg
ccacagggccccccgggagagataggtttcccggggcagccaggggccaagggtgacaga
ggcttgcccggcagagatggtctggaaggattgcctggtccgcagggtgtaccggggctg
atgggccagccaggagccaagggagagcctggcgagatttacttcgacgcccgactcaaa
ggagacaagggagacccaggctttccaggacagcctgggatgccaggcagagcagggtct
cctgggagagatggccatccggggctgccaggccccaaaggctccccgggttcagtagga
ttgaaaggagagcgtggaccccctgggggagttggattccccggtagtcgcggtgacatc
ggccctcctgggcctccagggtttggccccattggccccgttggtgacaaaggacaagca
ggttttccggggatccctgggtccccaggccagccaggtcccaagggtgaagcaggaaaa
gttgtgcccctacctggtccccctggagcacagggacttccaggatccccaggtttccaa
gggccgcaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccgggagag
aagggagctatcggccagccaggaatcggatttccagggcctcctggccccaaaggtgtt
gatggcttacctggagacgtgggacctcctgggagtccaggtcgcccaggatttaatggc
ttacctggcaacccaggtgtgcctggccaaaagggagagccaggaattggtctgccagga
ctcaaaggattacctggtcttcccggcattcctggcacacctggggaaaaggggaacatt
ggaggaccaggcgttccaggagagcatggtgctattggccccccaggccttcagggaatc
agaggtgacccaggaccacctggattacaaggtcccaaaggagctccgggcgttcctgga
atcggcccccctggagcagtgggcccccctggaggacagggaccaccagggtcctcaggc
cctcctggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccaggc
cccaaaggagataaagggtcccaagggctgcctggcctgacaggacagtcggggctccct
ggtcttcctggacagcagggcacaccgggagttccagggtttccaggtcccaagggagag
atgggcgtcatggggaccccagggcagcctggctccccaggaccagcaggcctgccagga
ttgccaggagaaaaaggagaccacggcttcccaggctcctcgggacccaggggagaccct
ggcttcaagggggacaaaggtgacgtgggtctgcccggcaagcctggctccatggacaag
gtggacatgggcagcatgaagggtcagaagggagaccaaggagagaaaggacaaattgga
ccaactggtgataaaggatcccggggagatcctggaaccccaggagtgcctggaaaggat
ggccaggcagggcatcctgggcagccaggacctaaaggtgacccaggcattggcggaacc
ccgggtgctcctggactccctgggcccaaaggatcagttggtggaatgggcctaccggga
acgcctggagaaaaaggtgtgcctggaatccctggcccacagggtgtccctggcttacct
ggggagaaaggagcaaaaggagagaaggggcaggctggccttcctggcattggaatcccg
ggccggcccggggacaagggagagcaagggatctcgggttttccgggaagtcctggagag
aagggagagaaaggcagcgctggcgttccggggatacccggctctccaggccccaaagga
ttgccagggactgtcggctatccaggaagccctggactgcccggagaaaaaggtgacaaa
ggcctcccaggatcagatggaattcctggcatcaaaggagaagcaggtcttcctgggcag
cctggccccacaggcccagccggccaaaaaggggagcccggcagtgatggaatcccaggg
tcagtgggagagaagggtgaaccagggctgcccggaagaggattcccagggtttccaggg
gccaaaggagagaaaggctcaaagggtgatgtgggattcccgggacaggccgggagtcca
ggcattcccggatccaaaggagagccaggattcctgggccccccggggccgcaaggacag
ccaggcttgcctggagccccaggccacgctgtggagggacccaagggagaccgaggcccg
cagggtcaacccggcctaccagggcttccgggacctgtgggacctccagggctccctggg
cttgatggactcaaaggtgacaaaggaaacccagggtggccgggggctcccggagctcca
gggcccaagggagagccaggattccagggcctgcctgggattggaggctctccaggcatc
actggctcgaagggggatatgggacctcctggagttccaggatttcaaggtcagaaaggt
ctccctggcctgcagggagccaagggcgatcaaggtgaccagggcttccctggaagtaaa
ggccttcctggtcccccgggtcccccagggccctatgacatcgtcaaaggcgacccaggg
cttcctggtccggagggtcctgcaggtctgaaggggctcccgggacctccaggccccaaa
ggacagcaaggtgtgacgggatccgtgggcttacctggaccaccaggtattcctggtttt
gacggtgcccctggccagaaaggagagactggacccttcggcccccctggtccaagaggg
tttccaggcccgccaggccctgatgggttgccaggatccatgggtcccccgggcacccca
tctgtggaccatggcttcctcgtgactaggcacagtcaaacaacagacgacccacagtgt
ccacctgggaccaaaattctttaccacgggtactccttgctctacgtgcaaggcaacgaa
cgagcccatggccaggacttgggcacggcggggagctgtctgcgaaagttcagtacgatg
cccttccttttctgcaacatcaacaacgtgtgtaacttcgcctcccgaaacgactactcc
tactggctatccacgccggagcccatgcccatgtccatggcgcccatcgccggggacaac
atcaggccatttattagcaggtgcgcggtgtgtgaggcgccagccatggtgatggctgtg
cacagccagaccattcagatcccgcagtgccctagcggctggtcctccctctggatcggc
tactccttcgtgatgcacaccagcgccggcgccgaaggttctggccaagcccttgcgtct
cctgggtcttgcctggaagagtttcgaagtgcgccattcatcgagtgccacggccgtggg
acctgcaactactacgccaatgcttacagcttctggctcgccactatcgagagaagcgag
atgttcaagaagcccacgccatccaccttgaaggcaggagagctacgcacacacgtcagt
cgctgccaagtctgtatgagaagaacgtaa
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