KEGG   Canis lupus dingo (dingo): 112656476
Entry
112656476         CDS       T08371                                 
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112656476 (SF3B1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clud03041]
    112656476 (SF3B1)
   03036 Chromosome and associated proteins [BR:clud03036]
    112656476 (SF3B1)
Spliceosome [BR:clud03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112656476 (SF3B1)
 Complex B
    112656476 (SF3B1)
 Complex C
   U2 SnRNP specific factors
    112656476 (SF3B1)
Chromosome and associated proteins [BR:clud03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    112656476 (SF3B1)
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298 TALPID3
Other DBs
NCBI-GeneID: 112656476
NCBI-ProteinID: XP_025297651
Ensembl: ENSCAFG00020004750
UniProt: A0A8C0QVH3
LinkDB
Position
37:complement(7267254..7329815)
AA seq 1304 aa
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq 3915 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaagacccacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacaatcaacagaacag
tatgatccattcgctgagcaccgacctccaaagattgctgaccgggaggatgaatacaaa
aagcacaggcggaccatgataatatccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttaactaaagaagagagagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagttgtcaatggagcagcagcatcccaacctccctcaaaacgaaaacggcgttgg
gatcaaacggccgatcagactcctggtgccactcccaaaaagctgtcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagtcac
acaccagcgggagctgctactcctggacgtggggatacaccaggccatgcaacaccaggc
cacggaggcgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagactcctcgaacagaccgaggtgga
gactcaattggtgaaacaccaactccgggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggtggaagcacacctgttctgacccctggaaagacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcgtggcggtgggaaagagaaattgatgagagaaaccgccccctttct
gatgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagctggt
tatgttcctattagaactccagctcgaaagctgacagcaactccaacacctttgggtggc
atgaccggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccaacca
tccggaaatctcccatttttaaaacctgatgatattcagtactttgataagcttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagctg
cttttaaaaattaagaatggaacacctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttccactcctgatg
tctcctacactggaggatcaagagcgtcatttacttgtgaaagttattgatcgaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtggtcattgaacca
ttgttgattgatgaagattactatgctagagtggaaggtcgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatttctaccatgagacctgatatagataacatg
gatgagtatgtccgtaacacgacagctagagcttttgctgttgtagcctctgccctgggc
attccttcattgttgcccttcttaaaagccgtgtgtaaaagcaagaagtcctggcaagcg
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcatcgaacatggtcttgtggatgagcaacagaaa
gttcggaccattagcgctttggccattgctgccttggctgaagcagcaactccatatggt
atcgaatcttttgattctgtgttaaagcctctgtggaagggtatccgccaacacagagga
aagggtttggctgctttcttaaaggctattgggtatcttattcctcttatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaatttcaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtgaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttctggcaa
cacagaatggctttggacagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcggcagaaattatatccagaattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacagctgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaatggcttcggcacagtggtcaatgct
cttggcaaacgagtcaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagcaaaagtcaggcaacaggcagctgacttgatctctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaagttgatggggcacttgggtgttgttttgtatgaa
tatttgggtgaagagtaccctgaagtattgggcagcattctgggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctcctgcctagactc
acccccatcttaaagaacaggcatgaaaaagtacaagaaaattgtattgatcttgttgga
cgtattgctgacaggggagctgagtatgtgtctgcaagagaatggatgaggatttgcttt
gaacttctggagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggctacattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgtcgcc
gaaacatgttcacccttcacggtactacctgccttaatgaatgaatacagagttcctgag
ctgaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatatatgctgtaacaccattacttgaagatgctttaatggatagg
gatcttgtacacaggcagacggctagtgcggtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctccccatgtaattcaggcagttatgggagccctggagggcctgagagttgct
attggaccctgtagaatgttgcagtattgtttacagggtttgtttcacccggcccggaaa
gtcagagacgtgtattggaaaatttacaactccatctacattggttcacaggatgcgctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttacgaactt
gactatatcttataa

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