Canis lupus dingo (dingo): 112658809
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Entry
112658809 CDS
T08371
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03013
Nucleocytoplasmic transport
clud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112658809 (UPF2)
03015 mRNA surveillance pathway
112658809 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112658809 (UPF2)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112658809 (UPF2)
mRNA cycle factors
P-body specific factors
112658809 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
112658809
NCBI-ProteinID:
XP_025300839
Ensembl:
ENSCAFG00020005882
LinkDB
All DBs
Position
2
Genome browser
AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKETLLNNKEKDCSERRPVSSREKPKDEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEEKKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEAKEPKDNKEVSNPDDLELELENLEINDDALELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NSDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaaactttactaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagtagcagggagaaaccaaaagacgag
atcaagcttactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcggaggaagaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagaaaaagaagcaagaagagcaggcaaaacgtcagcaagaagaagaagctgcccagttg
aaagagaaagaggaatcccttcagcttcatcaggaagcctgggaacgacatcagttaagg
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactatt
accgaacaacagagagactccttgtcccatgattttaatggcctgaatttaagcaaatac
attgcggaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaactgt
gctgtgcacttgtgctctctctttcaccagcgttatgccgactttgctccatcacttctt
caggtttggaaaaaacattttgaagcgaggaaagaagagaaaacccctaacattaccaag
ttaagaactgatttgcgtttcattgcagagttgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgaccgggaatcc
catactcatgtttctgtggtgattagtttttgtcgacactgtggagatgatattgctggg
cttgtgccacggaaagtgaagagtgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagcttcagaatactgagagacaaaac
aggcgtattctccattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcctatcagaagctgctggcaaattctcaatccctagcagacctcttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatctttacacctggtaagcctggagaatatgacttggaaggcggtatatgggaagac
gaagatgctcggaatttttatgagaacctcattgatctgaaagcttttgtaccagccatc
ttgtttaaagataatgagaaaagttgtcagaataaagattccaacaaagatgattccaaa
gaggcaaaagaacctaaggataataaggaggtatcaaatcctgatgatttggaactggag
ttggagaatctagaaattaatgatgatgccttggaattagaaggtggagatgaagctgag
gatctcacaaagaaactccttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctccagcagttgcccaactgtgtcaacaga
gatctgatagacaaggcagcaatggatttttgcatgaacatgaatacaaaagcaaatagg
aagaagttggtacgggcgctctttatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgctttattggagaattaactaaatttaagatgttcactaaa
aatgatacactacattgtttaaagatgcttctgtcagacttttcccatcaccatattgaa
atggcatgtactctgctggaaacatgtggaagatttcttttcagatcgccagaatcacac
ctgaggaccagcgtacttttggagcaaatgatgagaaagaaacaagcaatgcaccttgat
gcaaggtatgttacaatggtggagaatgcatactactactgcaacccacctccagctgaa
aaaacagtgaaaaagaaacgtcctcctctccaagaatatgtccggaaacttttgtacaaa
gatctctccaaggttaccactgagaaggttttgagacagatgcgaaagttgccttggcag
gaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatat
aatagtattcattgtgtagccaacctcttagcgggactggtgctctaccaagaagatgtt
ggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataattat
cgaatggtggaatcagctgttatttttagaactctttattcttttacctcctttggtgtt
aactcagatggctctccaagttcactagaccctcctgagcaccttttcagaattagacta
gtgtgcactattttggatacttgtggccagtactttgacagaggttccagtaaacgaaaa
cttgattgcttccttgtatactttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgatatagattacatgatcagtgatacattagaa
ctgctaagaccaaagatcaaactttgtaattctctggaagaatccatcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctagttaatgacaaagattccaaagat
tctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaa
actgaagaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttct
gataatgatgatgatgaaggcgaggaggaagaggaagagaatactgattaccttacagat
tccaataaagagaacgaaactgatgaagaaaatactgaggtaatgattaagggaggtgga
cttaagcatgtaccttgtgtggaagatgaggacttcattcaagctctggataaaatgatg
ctggaaaatcttcagcaacgaagtggtgaatctgtcaaagtgcaccaacttgatgttgct
attcccttgcatctcaaaagccagctgaggaaagggcccccacttggtggtggggaggga
gaaacagagtctgcagacacgatgccgtttgtcatgttaactagaaaaggcaataaacaa
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccag
caacaggcagaacaagaagagaggatgagaatgaaaaaactcacactagatatcaatgaa
cggcaagagcaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagctcca
gcaaacaccaatcgggagcggcgccctcgttaccaacatccaaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
