Canis lupus dingo (dingo): 112659465
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Entry
112659465 CDS
T08371
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X2
KO
K14284
nuclear RNA export factor
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03008
Ribosome biogenesis in eukaryotes
clud03013
Nucleocytoplasmic transport
clud03015
mRNA surveillance pathway
clud05014
Amyotrophic lateral sclerosis
clud05164
Influenza A
clud05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112659465 (NXF1)
03015 mRNA surveillance pathway
112659465 (NXF1)
03008 Ribosome biogenesis in eukaryotes
112659465 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
112659465 (NXF1)
05168 Herpes simplex virus 1 infection
112659465 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112659465 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112659465 (NXF1)
03009 Ribosome biogenesis [BR:
clud03009
]
112659465 (NXF1)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112659465 (NXF1)
mRNA cycle factors
Stress granule specific factors
112659465 (NXF1)
Ribosome biogenesis [BR:
clud03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
112659465 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
112659465
NCBI-ProteinID:
XP_025302088
Ensembl:
ENSCAFG00020013149
UniProt:
A0A8C0KIY5
LinkDB
All DBs
Position
18:53829907..53840568
Genome browser
AA seq
618 aa
AA seq
DB search
MADEGKAYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDVPRIRHNPYPPRPNRRGDSWHDRDRIHVTVRRDRILPERGGAGTSQDGTSKNWFK
ITIPYGRKYDKSWLLSVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSVPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASA
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaaggcctacaacgagcatgatgaccgtgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtatggcgaggggaaccggaggtctgga
agaggaggttctggcattcggtcttcccgcctggaggaagatgacagagatgtggcaatg
agtgatgcccaggatgttccccgaatacgacacaacccctatcctccccgacccaaccgt
cgaggtgacagttggcatgatcgagatcgcattcatgttactgtgcggagagacagaatt
cttccagagagaggaggggctggcaccagccaggatgggacctcgaagaactggtttaag
attacaattccctatgggagaaaatatgacaagtcatggctcctgagtgtgattcagagc
aagtgcagtgtccctttcacccccattgagtttcactatgaaaacacacgggcccagttt
tttgtggaggatgccagtaccgcctctgcattgaaagctgtcaactataagattttggat
caggaaaaccgaaggatatctatcatcatcaactcctctgtcccaccccattctgtacag
aacgaactgaagccagaacaagtagagcaactaaagctgatcatgagcaaacgatacgat
ggttcccaacaagcacttgacctcaagggtctccgttcagacccagacttggtggcccag
aacatcgatgttgtcctgaatcgcaggagctgtatggcggctacgctgcgaatcattgag
gagaatatccctgagctcttgtccttgaacttgagcaacaataggctctacaggctggat
gacatgtccagccttgtgcagaaagcacccaacctgaagatcctcaacctctccggaaat
gagttgaaatctgagagggaactggacaaggtaaaagggctgaagctggaagagctgtgg
cttgacggaaacccgctgtgcgacaccttccgagatcagtccacctacatcagcgccatt
cgagaacgatttcccaaattattacgcctggatggccatgagttacccccgccaattgcc
tttgatgtcgaagcccccacgatgttaccgccctgcaagggaagctattttgggacagag
accctgaagaacctggtcctgcacttcctgcagcagtactatgcagtttacgactctgga
gaccggcagcggctactagatgcctaccacgatggggcctgctgctccctcagcattccc
ttcaccccccagaaccctgcccgaagcaatctggccgagtacttcaaggatagcaggaat
gtgaagaagctcaaagacccgaccctgcggttccggctgctgaagcacacacgtctcaac
gtggtggccttcctcaatgagttgcccaaaactcagcatgacgtcaattccttcgtggta
gacataagcgcccagaccagtacgttgctgtgtttttctgtcaacggggtcttcaaagaa
gtggatggaaagtctcgggattctttacgagccttcacccggacatttgtcgctgttcct
gccagcaattcaggactgtgcatcgtaaatgacgagctatttgtgcggaatgccagcgct
gatgagatccagagagccttcgccatgcctgcacctacaccttcctccagtccagtgccc
accctgtccccagagcagcaggaaatgctgcaggcattctctacccagtctggcatgaat
cttgaatggtcccagaagtgccttcaagacaacaactgggactacaccagatctgcccag
gcctttactcatctcaaggccaagggcgagatcccagaagtggcgtttatgaagtga
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integrated database retrieval system
