Canis lupus dingo (dingo): 112660546
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Entry
112660546 CDS
T08371
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03082
ATP-dependent chromatin remodeling
clud04714
Thermogenesis
clud05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112660546 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112660546 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112660546 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112660546 (ARID1A)
03021 Transcription machinery [BR:
clud03021
]
112660546 (ARID1A)
03036 Chromosome and associated proteins [BR:
clud03036
]
112660546 (ARID1A)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Helix-turn-helix
ARID
112660546 (ARID1A)
Transcription machinery [BR:
clud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112660546 (ARID1A)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112660546 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
112660546
NCBI-ProteinID:
XP_025303871
Ensembl:
ENSCAFG00020021464
UniProt:
A0A8C0LA67
LinkDB
All DBs
Position
2:complement(71866711..71936338)
Genome browser
AA seq
2284 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGP
AVGPPQPLGKELQDGAESNGGGGGGGAGAGGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHH
APMSPGSSGGGAQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYPG
QPYGSQTPQRYPMAMQGRVQSAMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQ
QQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQPPYSQQPSQPPHQQSPTPYPSQQP
TTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPP
PQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSP
GVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAV
PGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGG
QMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGG
QMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAV
AMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSA
GMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPE
RKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATN
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAASDSKKSQPKIQPPSPAGSG
SMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTF
QKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDP
YSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMY
SPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPP
AKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAA
AATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQG
RNDMTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAP
VPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV
PASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG
QRTLLDPGRFSKACSPAPMEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDKAATESS
EEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFES
KTELLPNRPHVPCPPVTRKHVTAPEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSST
LTEEGAKSTEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC
VCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV
SCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQD
PFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNP
VCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNP
PFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFL
IGQS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggagagcgagggcccc
gccgtggggccgccgcagccactgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggtggagccggcgccggcggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggcggcggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggccgccggctccaagccgcctccctcttccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctca
gcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgcg
gcggcggcggcggcggcggcagcagccgcctcgggaggggcccaacaaaggagccaccac
gcgcccatgagccccgggagcagcggcggcggggcgcagccgctcgcccggaccccgcag
ccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaac
ccatactcgcaacaacagggaccttcatcaggaccgcagcaaggacatgggtacccaggg
cagccatatgggtcccagaccccgcagcggtacccgatggccatgcaaggccgggtgcag
agtgccatgggtggcctctcttatgcacagcagattcctccttatggacaacaaggcccc
agtgggtatggtcaacagggccaaactccatattacaaccagcaaagtcctcacccccag
cagcagcagccgccctactcccagcagccaccgtcccagaaccctcacgcccagccttcc
tatcagcagcagccacagtctcagccaccacagctccaggcttctcagcctccctattcc
cagcagccatcccagcctccgcatcagcagtccccaactccatacccctcccagcagccc
accacccagcagcacccccagagccagcccccctactcacagccacaggcacagtctccc
taccagcagcagcaacctcagcagccagcctcctcgacgctctcccagcaggctgcatac
cctcagccccagtctcagcagtcacagcaaactgcctattcccagcagcgcttccctccg
ccgcaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacc
tccagtaagggaggacaagaagatatgaacctgagtcttcagtcaagaccctcaagcttg
cctgatctatctggttcaatagacgatctccccatggggacagaaggagctctgagccct
ggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtct
cctttctctcctcatacttcccctcacctgcctggcatccgaggcccctccccatcccct
gttggctctcctgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtg
ccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatcct
tccatgaatcaatcgagcattgcccaagatcgaggttacatgcagaggaacccccagatg
ccccagtacagttccccccagcccggctcggccttatctccgcgtcagccttcgggtgga
cagatgcacacaggcatgggctcctaccagcagaactccatggggagctacggtccccag
gggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttgccc
aatgctaactaccctagtgcaggcatggccggaagcatgaaccctatgggtgctggaggt
cagatgcatgggcagcctggcatcccaccttatggcacactccctccagggagaatgagt
catgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggtt
gggtcagggatgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtc
gccatgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaat
caggggggcatgatgggaactggacctccctacggacaagggattaatagtatggctggc
atgatcaaccctcagggacccccgtatcctatgggtgggactatggccaacaattcagca
gggatggcagccagcccagagatgatgggccttggggatgtcaagttaactccagccacc
aaaatgaacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagt
tcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgag
aggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatgaca
aatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaag
gagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaac
ctcaatgtgggcacctcgagcagtgctgccagctccttgaaaaagcagtacatccagtgt
ctctatgcctttgagtgcaagattgaacggggagaagaccctcccccagacatctttgca
gcttctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatctggg
tctatgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggaggagac
ctgaagccaccaactccagcatccacaccacacagtcagatcccccccttgccaggcatg
agcaggagcaattcggttgggatccaggatgcctttcctgatggaagtgaccccacattc
cagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctctgac
atgatggggcgcatgtcctacgagccaaataaggatccttatggcagcatgaggaaagct
ccagggagcgatcccttcatgtcctcagggcagggccccaatggcggaatgggagacccc
tacagccgtgctgctggccctgggctgggaaatgtggcaatgggaccgcgacagcactat
ccctatggaggtccttatgacagagtgaggacggagcctggaataggacccgagggaaac
atgggcactggagctccacagccgaatctcatgccttccaacccagactcggggatgtat
tctcccagccgctaccccccgcaacagcagcagcagcaacaacgacatgattcctatggc
aatcagttctccactcaaggcaccccttccggcagccccttccccagccagcagaccaca
atgtatcagcagcagcagcagaattacaaacggccaatggatggcacatacggccctccc
gccaagcggcacgaaggggagatgtacagcgtgccatacagcacagggcaggggcagccg
caacagcagcagttgcccccagcccagccccagcctgccagccagcagcaagctgcccag
ccttcccctcagcaagatgtatacaaccagtatggcaacgcttatcctgccactgccgct
gctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggc
cgagaccgtgtctctgcaccccctggctccaatgcccagcagaacatgccaccgcaaatg
atgggcggccccatacaagcatcggctgaggttgctcagcaaggcaccatgtggcagggg
cgtaatgacatgacctacaattacaccaacaggcagagcactggctctgccccccagggc
cctgcctatcatggtgtgaaccgaacagatgaaatgctgcatacggatcagagggccaac
catgaaggcccatggccttcccatggtacacgtcagcccccatatggtccctctgccccc
gtgccccccatgacaaggccccctccatccaactaccagcccccgccaagcatgcagaat
cacattcctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacctct
cctagcaagtctccattcctacactctgggatgaagatgcaaaaggcaggccccccagta
cctgcctcgcacatagcacctgcccccgtgcagccacccatgattcggcgggacatcacc
ttcccacctggctctgtggaagcaacacagcctgtgttgaagcaaaggaggcggctcaca
atgaaagacatcggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctg
ctggcagagagcacatgggcattagacaccattaacatcctgctgtatgatgacaacagc
atcatgaccttcaacctcagtcagctcccaggtttgttagagctccttgtggaatatttc
cgacgttgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgacccagga
cagagaacactactggaccctgggagattcagcaaggcgtgtagtccagcccccatggag
ggggaggaggaagaagaccttttaggtcctaaactagaggaggaagaagaggaagaagta
gtggaaaatgacgaggagatggccttttcgggcaaggacaaggcagccacagagagtagt
gaggagaaacttattagtaagttcgacaagcttccagtaaagatcgtgcagaagaatgac
ccgtttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggcctg
ctgcactggcggattggtgggggggacaccactgagcatatccagacccactttgagagc
aagacagagctgctgccgaaccggcctcatgtgccctgccctccagtcacccggaaacat
gtcacagcaccagagggtacgccagggacgacagaacaggagggccccccacctgatggc
cctccagagaaacggatcacagccacaatggatgacatgttgtccactcggtctagcacg
ttgaccgaagagggagctaagagtacagaggccaccaaggagagcagcaagtttccattc
ggcatcagcccggcacagagccaccggaacatcaagatcctagaggacgaaccccacagt
aaagatgagaccccactgtgtacccttctggactggcaggattccctcgccaaacgctgc
gtctgtgtctccaataccatccgaagtctatcgtttgtgccaggcaacgactttgagatg
tccaaacacccgggtctgctgctgatcctgggcaagctgatcctcctgcatcacaagcac
ccagagcggaagcaggcaccactgacttatgagaaggaggaggagcaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacaccttg
gtcacgctcgccaacatctcggggcagttggacctctctccgtaccctgagagcatttgc
ctgcctgtcctggacggactcctacactgggcagtctgcccttccgctgaagcccaggac
cccttctccaccctgggccccaatgccgtcctctccccccagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacgccccccttc
agccgcttggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccg
gtgtgccgggagatggctgtggtactgctggccaacctggcacagggcgacagcctggca
gctcgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttcctggaggac
agccttgctgccacacagttccagcagagccaggccagcctgctccacatgcagaacccg
cccttcgagccaacgagtgtggacatgatgcggcgggctgcccgcgcactgctggccttg
gccaaggtggacgagaaccactcggagttcacgctgtacgagtcacggctgttggacatc
tcggtatcaccgttgatgaactcgttggtttcacaagtcatttgtgatgtactgtttttg
attggccagtcatga
DBGET
integrated database retrieval system
