Canis lupus dingo (dingo): 112661147
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Entry
112661147 CDS
T08371
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04151
PI3K-Akt signaling pathway
clud04510
Focal adhesion
clud04512
ECM-receptor interaction
clud04820
Cytoskeleton in muscle cells
clud04974
Protein digestion and absorption
clud05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112661147 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112661147 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112661147 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112661147 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112661147 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112661147 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clud04147
]
112661147 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112661147 (COL6A6)
Exosome [BR:
clud04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112661147 (COL6A6)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112661147 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
112661147 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
112661147
NCBI-ProteinID:
XP_025304815
LinkDB
All DBs
Position
23:27772555..27912928
Genome browser
AA seq
2268 aa
AA seq
DB search
MKMLLILFLIIICSPVSMNKDSGPEYADVVFLVDSSDHLGAKSFPLVKTFINRMISSLPI
EAHKYRVALAQYSDQLHSEFQLGTFKSRNPMLNHLKKNFGFVGGSLRIGQALREAHRTYF
SRPDSGRDKKQFPPILVVLASAESEDDVEEASKALRGDGVRIISVGLQSASEQELKAMAT
GQFHFNLRSARDLGAFAPNMTQIIKEATQYREVATDDILVEVCQGPSVADLVFLLDVSVN
GSQENFDYLKEFLEESVSALDIKENCMRVGLVTYSNETKVINSLSRGVNKSEVLQNIQNL
SPRAGKAYTGAAIRKIRKEVFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLRREG
VTIFTMGIEGASDSQLEKIASHPAEQHVSKLKTFSELAAHNQTFLKKLRNQITLTVSVFS
ERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPQKVRVGAVQ
YADSWDLEFEINKYTNKHDLGKAIENIRQMGGNTNTGAALNFTLGLLQKAKKQRGNRVPC
HLVVLTNGMSKDSILEPANRLREELIRVYAIGVKEANQTQLREIAGEDKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIGADRV
QIGVVQFSDINKEEFQLNRYMSQNEISNAIDRMAHIGETTLTGSALTFVSQYFSPAKGAR
PNVRRFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYNIMKDFMVDLVKKA
DVGKNQVRFGALKYADDPEVLFYLDDLSTKWEVISVLQKDQPMGGNTYTAEALGFSDHMF
TEARGSRLHKGVPQVLIVITDGESHDADKLNDTAKALRDKGILVLAVGIAGANPVELLAM
AGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKM
KEFLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQIENIQQIFGYTHI
GAALREVGDYFRPDMGSRINAGTPQVLLVLTDGQSQDEVAQAAEELRHKGIDIYSVGIGD
VDDQQLIQITGTADKKLTVHNFDELTKVKKRIVRNICTSGGESNCFVDVVVGFDMSTHEN
GQTLLEGQSWIETYLQDLLRAISSLNGVSCEVGTETQVSVAFQVTNAVEKYSPKFEIYSE
NILNSLKDVTVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDTEKLEQKSDE
LRKEGLNALITVALDGATDSSDLADLLYIEFGKGFEYRTQLTIGMRDLGSRLSKLLVNVA
ERTCCCLFCKCIGGDGTMGDPGPPGKKGSPGFKGSEGYLGEEGVAGDRGASGPMGEQGTK
GCYGAKGPKGNRGLNGQEGEVGESGIGGLNGEPGDSGLPGEKGEKGNEGSQGSPGKRGVS
GDRGSKGQRGDPGVPGFDNTIEGPKGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGH
TGPQGKTGIPGPDGLEGSWGVKGPQGPRGETGVKGEKGGLGSKGPQGPPGQGGEAGSPGH
LGSQGTKGEPGDLGEKGAIGLPGPRGLPGDDGNPGYGSIGRKGAKGQDGFPGESGPKGEM
GDLGGPGETGPKGARGKRISTGLPGEMGSPGEPGPPGRKGVKGARGLASFSMCELIQYVR
DHSPGGHGKPECPVHPTELVFALDQSRDVTKQEFERMKELMSSLVRGVRVRENSCPVGAR
IAILTYTSHARHLVRFSDAYKKQQLLREIEAIPYERSSDSREIGGVMRFISRNVFKRTLP
GSHTRRIATFFSSGQSADAQTIATAAMEFSALDIVPVVIAFSNVPSIKRAFAIDDTGTFQ
VIMVPSGTDYAPALERLQRCTFCYDVCKPDTFCDEAKPPPAQSYMDAAFLLDSSRHVQSA
EFEDMRHFLGALLDHFEISPEPETSVTGDRVALLSHAPPNFLPNTQKSPVKTEFNLTTYN
SKRLMKRHMEQSVQQLNGDAFIGHALQWTLDNIFLNTPNMRRNKVIFVISAGETNHLDRE
TLKKESLRAKCQGYALFVFSLGPAWNDKELEDLASYPLDHHLVQLGRIHKPDHRYSVNFV
KSFVNSIRRAINKYPPISFKMKCNRLTSTDVKQPPRQWRSFVPGPHKTALKEDALQKAKF
FQDKKYLSRVARGSRDIIRNLTRNTFHTFKNGKKVIKTAPKQHDKASA
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctgattttattcctcataataatttgttctcctgtctctatgaacaaa
gattctggtcctgagtatgcagatgtcgtgtttctggtggacagctccgatcacctggga
gctaagtccttccctcttgtgaaaacattcatcaacagaatgatcagcagcctccccatc
gaggcccacaagtaccgcgtggccctggcccagtacagcgaccagctccacagtgagttc
cagctgggcacgttcaagagcaggaaccccatgctgaaccacctcaagaagaacttcggc
ttcgttggtggctccctgcgcataggccaagccctccgggaggcccacaggacctacttc
tccaggcccgacagcgggagggacaagaagcagtttcccccgattctggtggtcctggct
tcggccgagtccgaggatgacgtggaggaggcctcgaaggccctgcggggagacggggtg
agaatcatctccgtggggctgcagagcgcgtctgagcaggagctgaaggccatggccacg
gggcagtttcatttcaacctgcggtcggccagggaccttggagcgtttgccccaaacatg
acgcagatcatcaaggaagccacccagtacagggaggtagccaccgatgacattcttgtg
gaagtttgccaaggcccgtctgtggctgacttggtgttcctgttggatgtgtccgtcaac
ggcagccaggagaactttgactatcttaaggaattcctggaagagagtgtatctgccctt
gacataaaggaaaactgcatgagggttggcctggtgacctacagcaatgagacgaaggtg
ataaactcactcagcaggggcgtaaataagtcggaggttctccagaatatacagaacctc
tctccccgggccgggaaggcctacacaggggctgccatcagaaaaatcaggaaggaagtg
ttcagtgcacgcaacggcagtcggaagaatcagggggtgccccagattgcggtgctggtg
acccacaggccctcagaggataacgtgaccaaggcagctgttaacctccggcgcgagggg
gtgaccatcttcaccatgggcatagagggggccagcgacagccagctggagaagatcgcc
tctcaccctgccgagcagcacgtgtccaaactgaaaaccttctccgagctggccgcgcac
aaccagacgttcctgaagaagctgcggaaccagatcacgctcactgtctctgtcttctcg
gaacgcactgaaacgctcaaatccggttgtgtggatactgaagaagcagacatctatctg
ctcattgatggctctggaagcacccaggccacagacttccacgaaatgaagaccttcctg
tccgaggttgtaggaatgttcaacattgcaccccaaaaggtgcgggttggggctgttcag
tatgcggacagctgggacctggaatttgagatcaataaatacactaataagcatgacttg
ggaaaggccattgagaacattcggcagatgggtgggaacacaaacacgggtgcagcccta
aatttcacactagggctgttgcaaaaagcaaagaagcaacgaggaaacagagtgccctgt
catcttgttgtcctgacgaatggcatgtccaaggatagcatcttagagcctgcaaacaga
ctgagagaagaactcattcgcgtttatgccatcggggtcaaggaggccaaccaaacacag
ctgcgagaaattgcaggcgaggacaagagggtgtactatgtgcatgactttgatgcttta
aaagacataagaaaccaagttgttcaagaaatctgtgctgaagaagcatgcaaagagatg
aaagcagacatcatgtttctggtggacagttctggcagtataggacttgaaaacttcatc
aaaatgaaaacatttatgaaaaacctggtgagcaaatctcagattggggcagatcgagtg
cagatcggcgtagtccagttcagtgacatcaataaggaggaattccagctcaacagatat
atgtcccaaaacgaaatttcaaatgcaatagaccggatggctcacattggggaaaccacc
ttgactggtagtgccctgaccttcgtttctcagtacttcagccctgccaaaggtgcccgg
cccaatgtcaggaggtttctcatcctcatcactgacggtgaagctcaggacatagtcaag
gacccagcagtagcacttcgacaagaaggcataattatctactctgtgggggtgtttggt
tccaatgtcactcagctcgaggaaatcagcgggaggccggagatggttttttatgttgag
aattttgatattctgcaacacattgaagatgatcttgtttttggaatatgcagcccccgt
gaagaatgcaagcggattgaggttttggatgttgtgtttgtaattgacagttctggaagc
attgaccatgatgaatataatatcatgaaagactttatggttgacttggtgaaaaaagct
gatgttggcaagaatcaagtccgatttggggctctgaagtatgcagatgacccggaggtg
ctgttttatctggatgaccttagcacaaaatgggaggtgatttcggtgcttcagaaggac
cagcccatggggggcaatacttacactgctgaggcattaggcttctcagaccacatgttc
accgaagcccgtggcagccgtctgcacaaaggggtcccccaagtcctcattgtgatcact
gatggggaatcccacgatgcggataagctcaatgacacagccaaggccttgagggacaaa
ggcatccttgtcctggctgtggggatcgccggtgcaaatcctgtggagctgctagctatg
gcaggatcgagtgataagtacttcttcgtggagacgtttggaggcctgaagggaatattt
tcagatgtgtcagccagtgtatgtaactcttcaaaagtagattgtgaaattgaaaaagta
gatcttgtcttcctcatggatggttcaaacagcattcatccagatgacttcaagaagatg
aaggaattcttggcatctgttgttcaagactttgatgtcagtgtcaacagagtgcgtata
ggtgctgcccagtttagccatacctatcggccagaatttccactaggaactttcataggc
aaaaaggagatctcatttcagattgaaaacatccagcaaatctttggatacacacacatc
ggtgccgcactccgagaggtgggggattacttccggccagacatgggcagccggataaac
gcaggtaccccacaggtattgctggtcctcacagatggccagtctcaagacgaggtggct
caggctgctgaagagctgagacacaaaggtattgacatttattctgtgggcattggggat
gtggatgaccagcagctcattcagatcaccgggactgcagataaaaaactgacggttcat
aactttgatgaactgacaaaggtcaagaaaaggatagttcgcaacatctgtacctcgggg
ggtgagagcaattgttttgtcgatgttgtggtgggatttgacatgtcaactcatgagaat
gggcaaactttgctcgaaggtcagtcttggatagaaacctaccttcaagaccttttacgt
gccatcagctccctcaatggggtaagctgtgaggtgggcacagagactcaagttagcgtg
gcttttcaagtgacgaatgctgtggaaaaatattcccccaagtttgagatctatagtgaa
aacatactgaacagcttgaaggatgtaactgttaaaggaccatctctactcaatgcaaat
ctcttgagttctctgtgggatgcatttcagaataaatcagctgctcgaggaaaggtggtt
ctcttattttcagatggattggatgatgacactgaaaagcttgaacaaaaatctgatgaa
cttagaaaagaaggcctgaatgccctcataactgttgccctggatggagccactgattca
agtgacctggctgatcttctctacattgaattcgggaaagggtttgagtacaggacgcag
ctcactattggaatgagagaccttgggagccgactgtcaaagctactggttaatgttgct
gaaaggacatgctgctgtttgttctgcaaatgcattggaggggatggcacaatgggagat
cctggaccaccggggaaaaagggatccccaggttttaaaggcagtgagggctatctggga
gaggaaggtgttgctggagacagaggagccagtggaccaatgggagagcaaggtactaag
ggatgctatggcgccaaaggtcctaagggaaacaggggactaaatggacaggagggagaa
gttggagaaagcggaattggcggattaaatggagaaccgggtgacagtggtcttcctgga
gaaaaaggagaaaagggtaatgaaggatcccagggaagcccaggaaagcgaggagtttct
ggtgaccgaggctcaaaggggcagcgaggagaccccggagttcctggatttgacaatacc
atagaaggacctaagggcttgaaaggagaacgtggaagacaaggtagaagaggctggcca
ggcccccctggaacaccaggctccagaagaaagacagcagctcatggccgaaggggacat
acaggcccacaggggaaaacaggcatcccaggcccagatggacttgaaggctcatgggga
gttaagggccctcagggtcccagaggagagactggtgtgaaaggcgaaaaaggaggtctg
ggaagtaaaggtcctcaggggcctccaggacaaggaggagaagcagggagtccaggccat
ctgggaagccaaggaactaaaggagaacctggagatttgggagaaaaaggagctattggc
ctcccgggtcctcgaggcttaccgggtgatgatggcaacccaggttatggtagcattgga
aggaaaggagcaaaggggcaagatggatttcctggagaaagtggtcctaagggtgagatg
ggggaccttggtggtccaggagaaactggacccaagggagctagaggcaagaggatatcc
actgggcttccgggagagatgggatcccctggggagccaggacctcctggacgcaagggt
gtgaaaggggccagaggattggcttcattttctatgtgtgagctcattcagtatgtacgg
gatcacagccctggcggacatggaaaaccagaatgccccgtgcatcccaccgaattggtg
tttgccttggaccagtctcgggatgtcaccaagcaggaattcgagcgcatgaaggagctg
atgtcttccctggtgagaggcgtccgggtccgggagaacagctgcccggtgggcgcccgc
atcgccatcctcacctacacctctcacgcccggcacctcgtccgcttctcagacgcctac
aagaagcagcagctcctccgggagattgaagctatcccttacgagaggtcctcggacagc
agggagatcggcggggtgatgaggtttatctccaggaatgtcttcaagcgaacgcttcca
ggctctcacacaagaagaatcgccaccttcttcagcagcggtcagtctgcagatgcccag
accattgccacggcagccatggaattcagtgcccttgacatcgttccggtggtcatcgcg
ttcagcaacgtgccctccatcaagcgtgcatttgcaattgatgacactggcacattccaa
gtaataatggttccatccgggactgactacgcgccagcattagagagactacagcggtgt
actttctgctatgatgtatgcaagccagacactttttgcgatgaagccaaaccaccccct
gcacagtcttacatggatgctgctttccttctggacagctctcggcatgtgcaaagtgct
gaatttgaagacatgagacactttttgggagcactcttagatcactttgagattagccca
gagcctgagacctctgtcactggagaccgggtggccctattaagccatgctccccccaat
ttcctacccaacactcagaagagtcctgttaaaactgagttcaaccttaccacctacaat
agtaaacgcctcatgaagaggcacatggaacaatcagttcaacaactaaatggagatgct
tttattggtcatgccttacagtggaccctggacaatatctttttaaatacacccaacatg
agaagaaacaaagtcatatttgtcatatctgctggggaaaccaatcacttggacagggaa
accttaaagaaagaatccttaagagccaaatgtcaaggttatgccctatttgtgttttcc
cttggccctgcttggaatgacaaagaactagaagatctagccagctaccctttggatcac
cacttggtccagcttggccgaattcataaacctgatcacagatatagtgtgaattttgtg
aaatcctttgtaaactcaatcaggcgtgcaatcaacaaatatccaccaataagcttcaaa
atgaagtgcaatagactcacctctacagatgtgaagcagcctccacggcagtggagaagc
tttgttcctggaccacataaaactgccctcaaagaagatgcattacagaaggcaaagttc
tttcaagataaaaaatatctttcaagagtagcaagaggcagcagagatattattcgaaat
cttaccagaaacacattccatacctttaaaaatggaaaaaaggtgataaaaactgctcca
aaacaacatgataaagcaagtgcttga
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integrated database retrieval system