Canis lupus dingo (dingo): 112661272
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Entry
112661272 CDS
T08371
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04140
Autophagy - animal
clud04148
Efferocytosis
clud05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112661272 (VPS41)
04148 Efferocytosis
112661272 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112661272 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clud04131
]
112661272 (VPS41)
Membrane trafficking [BR:
clud04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
112661272 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
zf_RING_Vps8_fungal
Beta-prop_HPS5
WD40_WDHD1_1st
Vps39_1
zf_RING_Vps8
Beta-prop_RIG_2nd
zf-RING_5
TPR_PEP5_VPS11
Frtz
RIG-I_C
zf-C3H2C3
Beta-prop_IFT140_2nd
zf-RING_11
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
112661272
NCBI-ProteinID:
XP_025304983
Ensembl:
ENSCAFG00020023396
UniProt:
A0A8C0LFM1
LinkDB
All DBs
Position
18:10774778..10948043
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AA seq
854 aa
AA seq
DB search
MAEAEEQETESLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVKSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGDYDIAARKCQK
ILGKNTALWECEVYKFKEIGQLKAISPYLPRGDPILKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPVPSMSSPAQFCGICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaaccgagtctctcgaagaatctacagatgagtctgag
gaagaagaaagtgaagaggaacccaaactgaagtatgaaaggctttccaatggggtaact
gaaatccttcagaaggatgcagctagctgcatgacagtccatgacaagtttttggcactg
ggcacacattatggcaaggtgtatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcctggatgaaagtggagagcacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccccatttcgtgaaatccagc
tgcaagcagtttgtgactggagggaagaagttgctgctatttgaacgatcttggatgagc
agatggaagtcttctgttttgcacgaaggggaagggaacataaggagtgtgaagtggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcacctcaaag
cagagaatcaccaatgtgccccgggatgatataagtcttcgcccagatatgtatccctgc
agcctctgctggaaggacagcgtgacgctgattattggctgggggacttctgtcaagatc
tgctcagtgaaggaacggcatgccagtgaaatgcgggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacattagtggacttgcacctctctgtgaccag
ctggttgttctttcctatgtgaaggaggtttcagaaaaaacggaaagagaatactgtgcc
aggccacgactagatatcatccagccgctctctgaaacttgtgaagagatctcttctgac
gctctgacagtgagaggctttcaggagaatgagtgcagagattatcatttagagtactct
gaaggggaatcgctcttttacatcgtgagtccaagagacatcgtagtagccaaggaacga
gaccaagatgaccacatcgactggctccttgaaaagaagaaatacgaggaagctttgatg
gcagccgaaatcagccagaagaacattaaaagacataagattctagatattggcctggca
tatataaaccacctggtggaaaaaggagactatgacatagcagctcgcaaatgccagaaa
attcttgggaaaaatacggcactctgggaatgtgaagtttataaatttaaagaaattggg
cagcttaaggctattagtccttacttgccaagaggagatccaattctgaaaccactcatc
tatgaaatgatcctgcatgaatttttggaaagtgattatgagggctttgccactctgatc
cgagaatggcctggagatctgtacaacaattcagtaattgtgcaagcagttcgggatcac
ctgaagaaggatagtcagaatagaaccttactcaaaaccctggctgaactgtacacctat
gacaaaaactatggcaatgctctggaaatatacttaacattaagacacaaggatgttttc
cagttgatccacaaacataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaagtagtggaagaactggaagatagaccagagttgcagcatgtgtatctgcataag
cttttcaagagagaccatcataaggggcagcgctaccatgaaaaacagattagcctttat
gctgaatatgatcgaccaaacttacttccctttctccgagatagtacccattgcccactt
gaaaaggctcttgagatctgtcaacagagaaacttcgtagaagagaccgtttatcttctt
agccgaatgggtaatagccgaagtgccctgaagatgatcatggaggaattacatgatgtt
gataaagcaattgaatttgccaaggagcaagatgatggagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttattactggcttgttgaacaacattggcacgcat
gtggacccaatcctactgattcaccgtattaaggaagggatggagattcccaatttgaga
gattccttggtgaagattctgcaagactacaatttacaaattctacttcgtgaaggttgc
aagaagattctcgtagcggactctttgtccttactgaagaaaatgcaccgaactcaaatg
aaaggagttctggttgatgaggagaacatctgtgaatcgtgcctttctcctattctccca
tcagatgcagctaagcccttcagcgtggtggtcttccactgccgccacatgttccacaag
gagtgcctgcccgtgcccagcatgagctcccctgcgcagttctgcggcatctgcagtgcc
aagcaccgcggaccaggaagtgccattttggagatgaagaagtag
DBGET
integrated database retrieval system
