Canis lupus dingo (dingo): 112662856
Help
Entry
112662856 CDS
T08371
Symbol
VPS8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112662856 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clud04131
]
112662856 (VPS8)
Membrane trafficking [BR:
clud04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112662856 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
TPR_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_WDR5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
112662856
NCBI-ProteinID:
XP_025307284
Ensembl:
ENSCAFG00020002732
LinkDB
All DBs
Position
34:17616950..17885834
Genome browser
AA seq
1426 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVH
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAM
DHIEELVSLRPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQELL
QMSPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDI
HGAFLIMLKRLQSKLQEITHQDEKSKEDLSLKDVEDTMVETIALCQRNSHNLNQQQREAL
WFPLLEAMMAPQKLSGSAAPHLHPEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICL
QQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKGGKLSENS
SEIKKGKTTSSQVKMSPPCHPSKGDSTVKKAASEPVLDPQQIQAFDQLCRLYRGSSRLAL
LTELSQNRSSESYRPFSGSQSGSAFSSIFQNENFQLQLIPPPVTED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctttgtgccaagactactgaa
gaagagctgaataagtctttcaatcttgaagcttccctttcaaaattctcttacatagat
ttggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactccaccaacactggaaagcatactcaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacgttgttaaacattgatactattgattctcactcctat
gatacttcctctgtggcaagttcagatagtggtgacaggaccaacctaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagctgtgggtacatctcatggattggctttaatatttgatcag
aatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatggagccatc
tctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgcaaaaggacag
atcacgatgtgggatttggccagtggaaaacttctaagatcaataacagatgctcatcct
ccaggaacagctatactgcatattaagtttacagatgatccaactcttgcaatttgcaat
gacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagaacatgt
gaatctagatgtctgttcagtggttccaagggtgaagtttgctgtattgagcctctccat
tcaaagcctgagttaaaagatcatcccatcacacagttttccttattggccatggcgtcc
ttaacaaagatactggtcattggattgaaaccatctttgaaagtgtggatgacttttccc
tatggacggatggatccttccagtgttccattgctggcctggcactttgtggcagtgcat
aattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctgttggtt
aagagagatgagtctggagcaatacacgttactaagcaaaagcaccttcatctctactat
gatctcatcaactttacttggataaactcacgcacagttgtgctcttggacagtgtggag
aagttgcatgtgattgatcggcagactcaagaggaattggaaacagtggagatctcagag
gttcagttggtctataatagcagccatttcaaatccctagccaccggaggaaatgttagc
caggcactggctttggttggagagaaggcttgttatcaatccatcagtagctatggtggt
cagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctggagagag
agagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgcatggtct
ttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccagtaagcgaaag
gctgttgttgcagatcggatggtagaaatcctgttccactatgcagatcgagctctgaaa
aagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatggtacct
gtcatagttgattactgcctgctgttgcaacgaaaggatcttttatttagccagatgtat
gataaactaagtgagaactcagtggccaaaggagtgtttttggagtgccttgagccatat
attttaagtgataaattggtggggatgaccccccaggtaatgaaagacttgattgttcat
ttccaagataaaaagttgatggaaaatgtggaagccctcattgtacatatggatatcacc
agcctcgatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgatgccatg
atctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaacttttcaga
gtcattgctcctcctctgaatgcaggaaggacactaacagatgagcaagttgttatgggc
aacaagcttctcgtatatattagctgttgtcttgcaggccgagcctatcctcttggtgac
atccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgattcgcctg
cattcagcagaagcttcccctgaggaagaaatctacccctatgttcgaactctgctacac
tttgacacaagagaatttctaaatgttttggcactgacttttgaagattttaaaaatgac
aagcaagctgtagaatatcaacaacgaattgtggatattttgttgaaagttatggtggag
aattctgattttactccctcacaagtagggtgtctctttacattccttgcccggcagctt
gcaaagcctgacaataccttatttgtaaacagaaccctttttgatcaggtccttgaattc
ctctgcagtcctgatgatgactcccgacactctgaaagacagcaggtccttttagagttg
ctgcaagctggaggcatagttcagtttgaagagagtcggcttatccggatggcagaaaaa
gcagaattctatcaaatttgtgagtttatgtatgaacgagaacaccaatatgacaaaata
atcgattgctacttacgtgacccactaagggaggaagaagtctttaactatattcacaat
atattatccattcctggacacagtgcagaggagaagcaatctgtatggcagaaagcaatg
gatcatatcgaggaacttgtatccctgaggccctgtaaagctgcagagctggttgctact
cacttttctgaacagattgaaacagtcattaaaaaactccagaaccaagttttgcttttc
aaatttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaagaattgctg
cagatgtctccctgtgttacggagcagttcattgagctgctatgtcagttcagcccaaac
caggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatccagatt
acccaaaagtatcaacttcatgaagtcactgcctatctattagaaaagaaaggagatatt
catggtgccttcttaataatgctaaagaggctacagagcaaacttcaagaaataacacat
caagatgaaaaatccaaagaagatctctcactgaaggatgttgaagataccatggtagag
acaattgccctttgccagagaaattcacataatttgaaccagcagcaacgagaggcactc
tggtttccattattggaggcaatgatggctcctcagaagctgtctggttcagctgcgcct
catctacaccctgaagctctgaaatctttgaccatgcaagttctaaacagcatggcagca
tttattgctcttccatcaatcttgcaaagaatcttacaggatccagtttatggaaaagga
aaacttggagaaatccagggacttattctgggaatgttggatacctttaattatgaacaa
accctgctggaaacaactactagccttctaaaccaagatctccattggtcattgtgtaac
ctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctatatgtttg
cagcaatacaagagacgccaagaaatggctgatgaaatcattgtctttagctgtggccat
ttgtatcactcattctgtctgcaaaacaaagagtgcaccatagaaactgaggggcaaaca
agatggacatgctacaaatgcagctcaagtaacaaaggagggaaactaagtgaaaattca
tctgaaattaaaaagggaaagacaacctcatcacaggtaaaaatgtctcctccttgtcat
ccatccaaaggagattctactgttaagaaggcagcctcagaacccgttctggatccacag
caaatccaagcatttgatcagctctgccgtctctaccgaggaagttcccggctggctctc
ctcacagaactctcccagaatcgcagcagtgagagctacaggccattcagtggctcccag
agtggctctgctttcagcagcatcttccagaatgagaatttccagctgcagctcattccc
ccacctgtgactgaggactga
DBGET
integrated database retrieval system
