Canis lupus dingo (dingo): 112663407
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Entry
112663407 CDS
T08371
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112663407 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112663407 (PATL1)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112663407 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
112663407 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
112663407
NCBI-ProteinID:
XP_025308103
Ensembl:
ENSCAFG00020001648
LinkDB
All DBs
Position
18:37077599..37106994
Genome browser
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAAPPPPQQHSPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALADERKHKICSMYDNLRGKLPGQDRPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLNPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPSNPHLAAVLQNKFGLSLLLVVLSRGEDLQSSDPATESTQNNQWTEVMF
MATRELLRIPQAALAKPISMPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtccttagaggattgtcccctggatgaagatgaagatgcatttcag
ggcttaggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gctgttgatgatgattggcaagaagcccatgagcgcctggctgaattggaagagaaactg
ccagtggcagttaatgaacaaacaggcaatggagaaagggatgaaatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagcaatcatgagagcagtgcagaccaggccagttctgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgccgacagtgtctgtattagaatatgccctgcctcaaaggcccccacag
ggcccagaagatgatcgagacctttctgagcgtgcattaccacggcggtcaacttcacct
atcattgggagtcctcctgttagagccgtccccataggcaccccacctaagcagatggcc
gtacccagcttcaaccagcagatcctgtgtcccaagcctgtccatgtccggcccccgatg
ccaccgcgttatcctgctccctatggcgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcccgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctaccgcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgctagctgccatgaaccccaagttg
ctgcaagggcgagtggggcaggtgcttcccccagcacccggcttccgggccttcttcagc
gctgcaccccccgctgctccgccgcctccacagcagcactcccctggcccagggcctcac
ctgcaaaacctaagatctcaggcccccatgtttagaccagacacaactcacctccatcca
caacaccgtcggctcttgcatcagagacagcaacagaacagaaaccagcatcggagcctc
aatggtgctggagatagaggaagtcaccggagcagtcatcaggaccatctccgaaaggat
ccctacgccaatctcatgctgcagcgagagaaggattgggtctctaaaatccagatgatg
cagctgcagagcactgacccctacctggacgatttctattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaagtacaaggcgaaggtcccaaaaaggagcgcacc
aaactcattacccctcaggtggccaaactggagcacgcctataagccagtgcagttcgag
ggctctttgggaaagcttactgtctccagtgtgaataacccccgaaaaatgattgatgcc
gttgtaacatcgcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctatagtttactcctggatgtggaggattat
gaaaggcggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagacaggcca
agtgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgt
attcttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaat
ctccctttccttatcaagaaggacgcacaagacgaggtgctgccatgcttactgaatccc
ttctctctgctcctgtatcaccttccgtcagtgactgtcaccagccttctgcaacagctc
atgaacctacctcagagcgcagctgcaccagcaccctccaaccctcacctcgctgctgtg
ctccagaacaagtttggcctgtcactgctcctcgtcgtcctgagccgtggggaagacctg
cagagttcagaccctgccacagaatcaacacagaacaaccagtggacggaggtgatgttc
atggcaacccgggaacttctgcggattccccaagcagccctggccaagcccatctctatg
cccacaaacctggtgtccctgttttctcgctatgtggaccgacagaaactgaacttgctg
gagacaaagctgcagctcgttcaggggatccgataa
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