KEGG   Canis lupus dingo (dingo): 112663407
Entry
112663407         CDS       T08371                                 
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112663407 (PATL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clud03019]
    112663407 (PATL1)
Messenger RNA biogenesis [BR:clud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112663407 (PATL1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     112663407 (PATL1)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 112663407
NCBI-ProteinID: XP_025308103
Ensembl: ENSCAFG00020001648
LinkDB
Position
18:37077599..37106994
AA seq 771 aa
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAAPPPPQQHSPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALADERKHKICSMYDNLRGKLPGQDRPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLNPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPSNPHLAAVLQNKFGLSLLLVVLSRGEDLQSSDPATESTQNNQWTEVMF
MATRELLRIPQAALAKPISMPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgttccgctacgagtccttagaggattgtcccctggatgaagatgaagatgcatttcag
ggcttaggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gctgttgatgatgattggcaagaagcccatgagcgcctggctgaattggaagagaaactg
ccagtggcagttaatgaacaaacaggcaatggagaaagggatgaaatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagcaatcatgagagcagtgcagaccaggccagttctgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgccgacagtgtctgtattagaatatgccctgcctcaaaggcccccacag
ggcccagaagatgatcgagacctttctgagcgtgcattaccacggcggtcaacttcacct
atcattgggagtcctcctgttagagccgtccccataggcaccccacctaagcagatggcc
gtacccagcttcaaccagcagatcctgtgtcccaagcctgtccatgtccggcccccgatg
ccaccgcgttatcctgctccctatggcgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcccgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctaccgcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgctagctgccatgaaccccaagttg
ctgcaagggcgagtggggcaggtgcttcccccagcacccggcttccgggccttcttcagc
gctgcaccccccgctgctccgccgcctccacagcagcactcccctggcccagggcctcac
ctgcaaaacctaagatctcaggcccccatgtttagaccagacacaactcacctccatcca
caacaccgtcggctcttgcatcagagacagcaacagaacagaaaccagcatcggagcctc
aatggtgctggagatagaggaagtcaccggagcagtcatcaggaccatctccgaaaggat
ccctacgccaatctcatgctgcagcgagagaaggattgggtctctaaaatccagatgatg
cagctgcagagcactgacccctacctggacgatttctattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaagtacaaggcgaaggtcccaaaaaggagcgcacc
aaactcattacccctcaggtggccaaactggagcacgcctataagccagtgcagttcgag
ggctctttgggaaagcttactgtctccagtgtgaataacccccgaaaaatgattgatgcc
gttgtaacatcgcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctatagtttactcctggatgtggaggattat
gaaaggcggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagacaggcca
agtgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgt
attcttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaat
ctccctttccttatcaagaaggacgcacaagacgaggtgctgccatgcttactgaatccc
ttctctctgctcctgtatcaccttccgtcagtgactgtcaccagccttctgcaacagctc
atgaacctacctcagagcgcagctgcaccagcaccctccaaccctcacctcgctgctgtg
ctccagaacaagtttggcctgtcactgctcctcgtcgtcctgagccgtggggaagacctg
cagagttcagaccctgccacagaatcaacacagaacaaccagtggacggaggtgatgttc
atggcaacccgggaacttctgcggattccccaagcagccctggccaagcccatctctatg
cccacaaacctggtgtccctgttttctcgctatgtggaccgacagaaactgaacttgctg
gagacaaagctgcagctcgttcaggggatccgataa

DBGET integrated database retrieval system