Canis lupus dingo (dingo): 112664627
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Entry
112664627 CDS
T08371
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112664627 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clud04121
]
112664627 (TRIM54)
Ubiquitin system [BR:
clud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112664627 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
Sina_RING
MIF4G_like_2
CoiA_N
COG2_C
UvrD_C
DD_DDX21-DDX50
DUF1421
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
112664627
NCBI-ProteinID:
XP_025310142
Ensembl:
ENSCAFG00020024271
LinkDB
All DBs
Position
17:21301588..21322749
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AA seq
479 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKAELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEGAAGWA
GRHWRALSCSLLGSPRTGAWRWGRGGPAQRPLRHPARRPAAGEGLNKGLMCSDPQLLSLL
TLSLGFRVTPSPSCPSPDPGPFEGRKWNDPCGASPWYQARFGELSAKGKGSGWCGGTST
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacatagcatggacaacctg
gagaagcagctcatttgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgaaagtgtgccaacgatgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttcaggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtgtatggcctgcagcgaaacctgcta
gtagagaacattattgacatttacaagcaggagtcttcccggccactgcactccaaggcc
gagcagcacctcatgtgtgaggagcacgaagaggagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgtcagaagagcgagctcagtgatggcatcgcaatg
ctggtggcaggcaacgaccgtgtgcaagcagtgatcacacagatggaggaagtgtgccag
accatcgaggacaacagccggaggcagaagcagctgcttaaccagaggttcgaggccctg
tgctccgtgctggaggagcgcaaggccgagctgctgcaggcgctggcccgcgagcaggag
gagaagctgcagcgcgtccggggcctcatccgccagtatggagaccacctagaagcctcc
tctaagctcgtggagtccgccatccagtccatggaggagccacagatggcgctgtacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagaaccgggctatgaaagcatggagcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagcccggcgcttccggggaggaagaggatgaggag
gtggcattggacggggaagagggcagcgcagggccggaggaaggagcggccggatgggcc
ggaaggcactggcgggcactgagctgctccctgttggggagcccgcgcaccggggcctgg
cgctggggtcgcggaggacctgctcagagaccgctgcgccacccagctcggcgcccagcc
gcgggggaggggctcaataaagggctaatgtgttcagacccgcagctcctttcactgctc
actctcagtctcggcttccgagtgaccccatcaccatcctgcccttctccggatccgggc
ccatttgagggacggaagtggaatgacccctgcggggcatctccttggtatcaagcacgg
tttggcgagctcagtgccaagggaaaagggtcggggtggtgcggcggcaccagcacctga
DBGET
integrated database retrieval system
