Canis lupus dingo (dingo): 112664857
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Entry
112664857 CDS
T08371
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112664857 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clud03021
]
112664857 (CPSF3)
03019 Messenger RNA biogenesis [BR:
clud03019
]
112664857 (CPSF3)
Transcription machinery [BR:
clud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112664857 (CPSF3)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112664857 (CPSF3)
U7-dependent histone pre-mRNA processing factors
112664857 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
112664857
NCBI-ProteinID:
XP_025310480
Ensembl:
ENSCAFG00020026799
LinkDB
All DBs
Position
17:6534637..6573934
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSVLSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcccgccgaggaaagtgaccagctgctgatccgaccccttggcgctgga
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgctagac
tgcgggatccaccctggcctagaaggaatggatgctcttccatatattgatttaattgac
ccagccgagattgatctcctgttaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagacaagcttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagtcagtaacatatcggcagacgac
atgctgtatacagaaacggatctggaagagagcatggacaaaattgaaactatcaacttc
catgaagttaaagaagttgcaggaatcaagttttggtgttaccacgcaggccacgttctg
ggagctgccatgttcatgattgagatcgcaggcgtgaagcttttgtacacaggcgacttc
tcaagacaagaagacagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttattattgaatctacttatgggacccatatccatgagaaacgcgaagagcgagaagca
agattctgtaacactgttcatgacattgtaaacagagggggcagaggcctcattcctgtc
tttgcccttggaagggctcaggagctgctcttgattttagatgagtattggcagaaccac
ccagaactccatgatatccccatatactacgcatcgtctttggccaagaagtgcatggcg
gtgtaccagacatatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaagcacattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagcgtcgtgatggcctccccgggcatgatgcagagtggcttatccagagagctc
tttgaaagctggtgcacagataagaggaacggcgtcattatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtctgagccagaagagatcactaccatgtctggacag
aagctaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaatgaaatggccagattgaaagcagccctgattcgagaatatgaggataacgatgaa
gttcacatagaggttcataatcctcggaatacagaagctgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcgggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtaaaacagacccaagccattccctatact
ggcccttttaatctgctctattatcagctacagaaattgacaggtgatgtggaagagtta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtcatacaggagcca
ggaatggtggtattagaatggttagcaaacccttccaacgatatgtacgcagatacagta
acaaccgtgatactggaagttcagtccaacccgaaaatcaggaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtctatagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgtaagcgtaaaagatggttctgttctcagcgtcacagtggac
gggaaaactgctaatataaacttggagacccggactgtagagtgcgaagaaggaagcgag
gacgatgagtccctccgagagatggtggagctcgccgcgcagagactgtacgaggccctc
acaccggtccactga
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