Canis lupus dingo (dingo): 112668745
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Entry
112668745 CDS
T08371
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X2
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clud04040
]
112668745 (SCN11A)
Ion channels [BR:
clud04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112668745 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
112668745
NCBI-ProteinID:
XP_025317041
Ensembl:
ENSCAFG00020025559
LinkDB
All DBs
Position
23:complement(8639616..8731764)
Genome browser
AA seq
1641 aa
AA seq
DB search
MFIICTVIINCVFMATAHGKDKNNTDTDNAEYVFTGIYIFEALIKILARGFILDEFSFLR
DPWNWLDSIVIVTAFVSYSPNTILNNSISMSSLRTFRVFRALKAISVVSGLKVIVGALLR
SVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCIKASCTDINKLSDSCFEKKNSSEFR
MCGIWMGESACSEGFQCNHTKRNPDYNYTNFDNFGWSFLAMFRLMTQDSWEKLYQQTLRA
SGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKMFQEAQRLLKEE
KEALVAMGIDRSSLNSLEASSFSSKKRKLFGNRKRKSFFLRDSGKDQTPGSDSDEDSTKK
PHILEQTKRLSQNLSVDYCDDHGDPFQRQRALSAVSILTITMQEQEKSQEPCLPCGENLA
SRYLVWNCSPRWLCIKKALRTVMTDPFTELAITVCIIINTVFLAMEHYKMDQSFESILYT
GNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFVDVMINIIVGKQCPRVFH
SLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQLFGSQFNSV
KSNRRSCNPTVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQETNQTLCIVVFLLI
MVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALDRFHRVFCIVIYTLEHFC
HKWCRTQNSPKRTKVTGGPAAQSKDIIPLVTEMKRGPETREEHDQTWLAPLAEEEDGFES
SGENNAQHITQPEAGKQCQAFEFHRETKKSTSPGAQSVEIDVFSEDDICLSKQDPQKKSD
TASVFSECSTIDPQDPFGRVTEMVLKKEPERCFPKGLGHCFPCCSMNKRKSPWIIWWNLR
KTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLEERPNIRDLLNCTDHIFTYIFILEMG
LKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRALRPLRALSQFQGMKV
VVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINRTDINSVINYSTIANQS
QCEGGNLSWVNLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGKEQQPGFEESPYN
YLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGEDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPLNKCQGLMYDLVTNQVFDVIIIILIFLNMLSMMAESENQLDTTKFILDRLNLA
FVVIFTIECLIKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALENQEHIPFPPTLFRI
VRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNCFCKVNE
EFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRPMLQSKDSCNPNLDSRHLPAIAITYF
VSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEKFDPEATQFIKYS
ALSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFTTRVLGDSSGLDNMK
VMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAIIQKAFRKYKVKMSTYALEDRPGSPL
HTLCNGDLSGSGVAEGKVHYD
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatctgcaccgtcatcatcaactgcgtgttcatggccaccgctcatgggaag
gacaaaaataatacagataccgacaatgctgagtatgtcttcactggtatttatattttt
gaagctttaataaaaatattggcaagaggttttattctggatgagttttcttttcttcga
gatccatggaactggctggactccattgtcattgtaacagcgtttgtatcatattcacca
aataccatactcaacaacagcatcagtatgtcatccctgcgtaccttccgagtgtttaga
gctttgaaagcaatttcagtggtttcaggtctaaaagtcattgttggggccttgctacgc
tctgtgaagaagcttgtcgacgtgatgatcctgactctcttttgcctcagcatcttcgcc
ctggtaggtcagcagctcttcatgggaagtctgaaccaaagatgtatcaaggcgagctgt
acggatatcaataaacttagtgatagttgctttgaaaagaaaaattcctctgaattcaga
atgtgtggcatctggatgggtgaaagtgcctgttctgaaggatttcaatgcaaccacacc
aaaaggaatcctgactataattataccaattttgacaactttggttggtcttttcttgcc
atgtttcggcttatgacccaagattcctgggagaagctttatcaacagaccttgcgtgcc
tcagggctcttctcagttttcttctttgtggtagtcatcttcctgggctctttttacctg
attaacttaaccctggctgttgtcaccatggcttatgaggaacagaacagaaacgtagct
gctgaaacagaggccaaggaaaagatgtttcaggaagcccagcggctgctgaaggaggag
aaggaggctctagttgccatgggaattgacagaagttcacttaattccctggaagcatca
tctttttcctcaaagaagagaaagctatttggtaataggaaaagaaagtccttttttttg
agagactctgggaaagaccagactccaggatcagattctgatgaagattccacaaaaaag
cctcacatcctggagcaaaccaaacgactctcccagaatctgtcagtggattattgtgat
gatcacggggaccccttccaaaggcagagggccctgagtgctgtcagcatcctcaccatt
accatgcaggaacaagaaaaatcacaggagccttgcctcccatgtggggaaaacctggca
tccagatacctcgtgtggaactgtagtccacgttggctgtgcattaagaaggccctgaga
actgtgatgactgacccctttactgagctggccatcaccgtctgcatcatcatcaacact
gtcttcttggccatggagcattacaaaatggaccagagttttgagtctatattgtacaca
gggaatttggttttcactggcattttcatggcagaaatgtgcctaaaaattattgcactt
gatccctacaactactttcgccgaggctggaacatttttgacagcatcgttgctcttctg
agttttgtagatgtgatgatcaatataattgtaggaaaacaatgtccgagggttttccat
tccttgagagtgctgagggtcttcaagttagcgaaatcctggccaactttaaacacactg
attaagataattggccactccgttggagctctgggaaacctgactgtggtcctggctatt
gtggtctttattttctcagtggttggcatgcagctttttggctctcaattcaattctgta
aagagtaatagaagatcctgcaaccctacagtcccatgtttacgacgctggcacatgggg
gacttttaccattcctttctggtggtattccgcatcctctgtggggaatggattgaaaac
atgtgggaatgtatgcaagaaacaaatcaaacactgtgcattgtcgtctttctgttgatc
atggtgatagggaaactcgtggtactcaacctcttcattgccttgctgctcaattccttc
agtaatgaagagagagatggaaacttggatggagagtccaaaaaaaccaaagtccagtta
gccctggatcggttccaccgggttttttgcattgttatatatactcttgagcatttttgt
cacaagtggtgcaggactcaaaactcaccaaagagaacaaaggtgacaggaggccctgct
gcccaaagcaaagatatcattccgttggtcacagagatgaaaaggggccccgagactagg
gaggagcatgatcagacgtggttggccccacttgcagaggaagaggatggttttgaatct
tctggagaaaacaatgcacagcatatcacacaacctgaggctggaaaacagtgtcaggcc
tttgaattccatcgggagaccaagaagtccaccagcccaggagctcaaagtgtggaaatt
gacgtgttctctgaggatgacatatgtttgtcaaaacaagatccccaaaagaagtctgat
actgccagtgtgttctcagaatgtagcaccattgatccacaggatccctttgggcgggta
actgaaatggttctcaaaaaagaaccagagcgatgttttcccaaaggcctgggtcactgc
ttcccatgctgttccatgaacaagagaaagtccccctggatcatttggtggaacctgcgg
aaaacctgctaccaaatagtgaaacacagctggtttgagagctttattatctttgtgatt
ctgctgagcagtggggcactggtatttgaagatatttaccttgaggaacgacccaatatc
cgagatttacttaattgtactgaccatattttcacatacatttttatcctggagatgggt
ctaaaatgggtggcctttggatttgggaagtatttcaccagtgtctggtgctggctcgat
ttcatcattgtgattgtctctgtgaccagtctcattgacttaaagagcttgaagtccttt
cggaccctacgagcactgaggcccttgcgagcattgtcccagttccaaggaatgaaggtg
gtagtcaatgctctcataggtgccatacctgccattctgaatgttttgcttgtctgcctc
attttctggctgatattttgtatcctgggagtaaacttcttttctggaaaatttggaaga
tgcattaatagaacagatataaactcagttataaattacagcactattgcgaatcaaagt
caatgtgaaggtggaaatttatcttgggtcaaccttccagtcaactttgacaatgtggga
atggcttaccttgccctgctgcaagtggcaacatttaagggctggatggatattatgtat
gcagctgtcgattccagagggaaagaacaacagccagggtttgaggaaagcccatacaac
taccttttcttcgtggcttttatcatctttggttcattctttactctgaatctctttatt
ggtgttataattgacaacttcaaccaacagcagaaaaagttaggtggtgaagacattttt
atgactgaagaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaacct
caaaagcccattccaaggcctctgaataaatgccagggtctcatgtatgacctagtcaca
aaccaagtctttgacgtcattatcatcatcctcattttcctcaacatgcttagcatgatg
gctgaatcagaaaaccagcttgataccacaaaattcatccttgatcgtctcaacctggcc
tttgtggtcatctttacaattgagtgtctcatcaaaatctttgctttgaggcaatactac
ttcaccattggctggaatttatttgattgtgtgatcgtggttctttctattgttagtaca
atggtttctgccttggagaaccaggagcatattcctttccctccaacactcttcaggatt
gtccggttggctcgcattggtcgaatcctgagacttgttcgggcagcacgaggaataagg
actctcctttttgctctgatgatgtcccttccctctctattcaacatcggtcttctactt
tttctggttatgtttatttatgccatttttggtatgaactgcttttgcaaagtgaatgag
gagtttggaattgatgacatattcaacttcaaaacttttgttggcagcatactctgtctc
ttccagatcaccacctcagcaggctgggatgccctccttaggcccatgctgcaatcaaag
gattcatgcaaccccaatttagacagccgccacctccctgccatagccatcacctacttc
gtcagttacatcatcatctcctttctcattgttgtcaacatgtacattgctgtgatttta
gagaacttcaacacagccacagaagaaagtgaggaccctttgggtgaagatgactttgag
atattctatgaagtctgggaaaagtttgacccagaagcaacacagttcatcaaatattct
gccctttctgactttgctgatgcccttcctgaacctttgcgtgtggcaaagccaaataaa
tttcaatttctcatgatggacttgcccatggtgagtggagatcgtcttcactgtttggat
attctcttcgcattcaccactagggtactcggtgactccagtggcctggacaacatgaag
gtcatgatggaggagaagttcatggaagccaacccttccaagaagttatatgaacccata
gtcaccaccaccaagaggaaggaagaggaaaggtgtgctgctattattcaaaaggccttt
cgaaaatataaggtgaagatgtccacgtatgccttggaagataggcctggttcaccactc
cacacactctgcaatggagacctttctggctctggggtggccgagggcaaggtccactac
gactga
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integrated database retrieval system
