Canis lupus dingo (dingo): 112669237
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Entry
112669237 CDS
T08371
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04151
PI3K-Akt signaling pathway
clud04510
Focal adhesion
clud04512
ECM-receptor interaction
clud04820
Cytoskeleton in muscle cells
clud04974
Protein digestion and absorption
clud05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112669237 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112669237 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112669237 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112669237 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112669237 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112669237 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clud04147
]
112669237 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112669237 (COL6A1)
Exosome [BR:
clud04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112669237 (COL6A1)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112669237 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
112669237 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
YcaO
Motif
Other DBs
NCBI-GeneID:
112669237
NCBI-ProteinID:
XP_025317976
LinkDB
All DBs
Position
31:39214956..39233167
Genome browser
AA seq
1026 aa
AA seq
DB search
MGPGRALLPLLLACWAAAQDAPGSARAVAFQDCPVDLFFVLDTSESVALRLKPYGALVDK
VKAFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIISPLTPMPADRDALKAKVDAVK
YFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAKH
LGVKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEIITQTIDTIVDMIKN
NVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGEPGRPGDLGPIGYQGMK
GEKGSRGEKGSRGSKGYKGEKGKRGIDGVDGMKGEMGYPGLPGCKGSPGFDGAQGPPGPK
GDAGAFGRKGEKGAPGADGEPGRPGNTGPPGDEGEPGLPGPPGEKGEAGDEGNPGPDGAP
GERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGEAGPAGPKGYRGDE
GPPGPEGSRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTKG
YPGLKGDEGEAGDPGDDNNDISPPGVKGAKGYRGPEGPQGPPGHTGPPGPDECEILDIIM
KMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFVVKVIDRLSRDELVKFEPGQSHVG
VVQYSHNQMQEHVDLRDPNIRSVQELKEAIKQLRWMAGGTFTGEALQYTRNQLLPPTQNN
RIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDMFGYVAGSDQLNVISCQGLGPQG
RPGISLVKENYAELLEDNFLKNVTTQICIDKKCPDYTCPIMFSSPADITILLDGSASVGS
HNFDTTKRFAKRLAERFLTAGRTDPAHDVRVAVVQYSGPGQQRPGRGALRFLQNYTVLAS
TVDGMDFFNDATDVNDALGYVTRFYREASTRDAKKRLLLFSDGNSQGATAAAIEKAVQEA
QRADIEIFVVVVGRQVNEPHVRVLVTGKTAEYDVAFGERHLFRVPSYQALLRGVFYQTVS
RKVAQG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggggccgggccgcgctctgctgccgctgctgctcgcctgctgggccgccgctcaggac
gcgccggggagcgcgcgggccgtggccttccaggactgccccgtggacctcttcttcgtg
ctggacacctccgagagcgtggccctgaggctgaagccctatggggccctggtggacaag
gtcaaggcgttcaccaagcgcttcatcgacaacctgagggacaggtactaccggtgtgac
cgcaacttggtgtggaacgcgggcgccctgcactacagcgacgaggtggagatcattagc
ccgctgacgcccatgcccgccgaccgcgacgccctgaaggccaaggtggacgccgtcaag
tacttcggcaagggcacctacacggactgcgccatcaagaaggggctggaggagctgctc
gtggggggctcccacctcaaggagaacaagtacctgatagtggtgacggacgggcacccc
ctggagggctacaaggagccgtgcggcggcctggaggacgccgtgaacgaggccaagcac
ctgggcgtcaaggtcttctccgtggccatcacgcccgaccacctggagccgcgcctgagc
atcatcgccacggaccacacgtaccggcgcaacttcacggcggccgactgggggcagagc
cgggacgccgaggagatcatcacccagaccatcgacaccatcgtggacatgatcaaaaac
aacgtggagcaagtgtgctgctccttcgaatgccagcccgccagaggacctcccgggcca
cggggcgaccccgggtatgagggagaacgtgggaagccgggcctcccaggagagaaagga
gaagccggggagcccggaaggcccggggacctcggacccatcggctaccaggggatgaag
ggagagaaagggagccgaggggagaagggctccagggggtccaagggctacaagggcgag
aagggcaagcgaggcatcgatggtgtggacggcatgaagggggagatgggctaccccggc
ctgccaggctgcaagggctcgcccggattcgacggagctcaaggaccccccgggcccaag
ggtgacgcaggtgccttcggacggaaaggagagaagggtgcccctggagctgatggggag
cccggaaggccggggaacacggggccaccgggagatgagggcgagccggggctgcctggt
ccccccggagagaagggagaagccggcgacgagggaaaccccggaccggacggtgccccc
ggagagaggggcggccctggggaaagaggaccacgggggaccccaggcgtgcggggccca
cggggagacccgggcgaagctggaccccaaggtgaccagggacgagaaggccccgtcggc
atccccggagacccgggcgaggctggccccgctggacctaaaggttaccgaggtgacgag
gggcccccggggcctgagggttccagaggagctcctgggcccgcggggccccccggagac
cccgggctgatgggtgaaaggggcgaagacggccccccgggaaacggcaccgagggcttc
cctggcttccctggctatccgggcagcaggggcccccccgggataaacggcaccaaaggc
tacccaggcctcaagggcgacgagggagaagccggagaccccggagatgacaacaacgac
atctccccaccaggagtcaaaggagcaaaggggtaccggggccccgaaggtccccaggga
cccccaggacacacaggacccccgggaccagatgaatgtgagatcctggacatcatcatg
aaaatgtgctcttgctgtgagtgcaagtgcggccccatcgacatcctcttcgtgctggac
agctccgagagcatcggcctgcagaacttcgagatcgccaaggacttcgttgtcaaggtc
atcgaccggctgagtagggacgagctggtcaagttcgagcctggccagtcgcacgtgggc
gtggtgcagtacagccacaaccagatgcaggagcacgtggacctgagggaccccaacatc
aggagcgtccaggagctcaaggaagccatcaagcagctgcggtggatggcgggcggcacg
ttcacgggcgaggctctgcagtacacgcggaaccagctgctgccgcccacccagaacaac
cgcattgccctggtcatcacggacggccgctcggacacccagagggacaccaccccgctc
agcgtgctctgtggcccggacatccaggtggtctccgtgggcatcaaggacatgtttggc
tacgtcgcgggctctgaccagctcaacgtcatctcctgccaaggcctgggaccccagggc
cggccgggcatctctctggtcaaggagaactatgcggagctgctggaggacaattttctg
aagaacgtcaccacccagatctgtatagacaagaagtgtccagattacacctgcccgatc
atgttctcctccccggccgacatcaccatcctgctggacggctcggccagcgtgggcagc
cacaacttcgacaccaccaagcgcttcgccaagcggctggccgagcgcttcctgacggca
ggcaggacggacccggcgcacgacgtgcgggtggcggtggtgcagtacagcgggcccggg
cagcagcggccgggccgcggggcgctgcggttcctgcagaactacaccgtgctggccagc
accgtggacggcatggacttcttcaacgacgccaccgacgtcaacgatgccctgggctac
gtgacgcgcttctaccgcgaggcctcgacccgcgatgccaagaagaggctgctgctcttc
tccgacggcaactcgcagggcgccacggcggcggccatcgagaaggcggtgcaggaggcc
cagcgcgcggacatcgagatcttcgtggtggtggtgggccgccaggtgaacgagccccac
gtgcgcgtcctggtcaccggcaagacggccgagtacgacgtggccttcggcgagcgccac
ctgttccgcgtgcccagctaccaggccctgctgcgcggcgtcttctaccagacggtgtcc
aggaaggtggcgcagggctag
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