KEGG   Canis lupus dingo (dingo): 112669281
Entry
112669281         CDS       T08371                                 
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
  KO
K16499  protocadherin delta 2
Organism
clud  Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:clud00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clud04515]
    112669281 (PCDH18)
Cell adhesion molecules [BR:clud04515]
 Cadherins
  Protocadherins
   112669281 (PCDH18)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_3 TMEM154 PAH PepSY Syndecan Cadherin_C_2 PAG BBS1 MPS-4
Other DBs
NCBI-GeneID: 112669281
NCBI-ProteinID: XP_025318028
Ensembl: ENSCAFG00020020721
LinkDB
Position
19:5243259..5258649
AA seq 1127 aa
MRCRLLCALLAASLGCAVLGRNLRYRIYEEQRVGSVVARLSEDAAEALRGLPGAAVRFRA
MQRGSAPLLRVDEDTGEVSVGAPIDREQLCARNLNCCIEFDVITLPTEHLQLFHIEVEVL
DINDNAPQFARPVIPIEISESAAVGTRIPLDGASDPDVGDNALHTYSLSANDFFAIEVRT
RTDGAKYAELIVVRELDRELRASYELLLTASDLGVPQRSGSSVLKISISDSNDNSPAFEQ
PSYVIQLPEDSPLGTLLLDLNATDPDEGANGKVVYAFSSHVPPRILETFKIDSETGHLTL
FRHVDYEVTKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNRPEININLMSPGKEEISY
VFEGDPVDTFVALVRVQDKDSGLNGEIVCRLHGHGHFKLQKTYENNYLILTNATLDREKR
SEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRYEFAISENNSPGAYITTVT
ATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQIPFVVEAR
DGGSPKQLASNTTVVLTVIDENDNVPVVIGPALRNNTAEISIPKGAESGFHVTRIRAIDR
DSGVNAELSCSIVAGNEENTFLIDPRSCDIHTNVSMESVPHTEWELAVVIQDKGSPQLHT
RVLLKCVIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLFATRCNREK
KDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTMNGTLPIRSHHRSSPSSSPTLERG
QMGSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQGQYQPRPS
FRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLFLTD
GRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEDFPAQPQQQHPHPSLE
EDTPPADSGEKKKSFSTFGKDSPNEEDSGDTSTSSLLSEMSSVFQRLLPPSLDTYPEGGE
VDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNSSGPPLGTHSSVQPSSKWLPA
MEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq 3384 nt   +upstreamnt  +downstreamnt
atgcgctgccggctgctgtgcgccctgctcgccgcgtcgctgggctgcgccgtcctgggc
cgcaacctccggtaccgcatctacgaggagcagcgggtgggctcggtggtcgcgcggctg
tcggaggacgcggccgaggcgctgcgggggctgcccggcgcggccgtgcgcttccgggcc
atgcagcggggcagcgcgccgctgctgcgggtggacgaggacacgggcgaggtcagcgtg
ggcgcgcccatcgaccgcgagcagctgtgcgcgcggaacctcaactgctgcatcgagttc
gacgtgatcacgctccccaccgagcacctgcagctgttccacatcgaggtggaggtgctg
gacatcaacgacaacgccccgcagttcgcgcggcccgtcatccccatcgagatctcggag
agcgcggccgtggggacgcgcatcccgctggacggcgcctcggacccggacgtgggcgac
aacgccctgcacacctactcgctctccgccaacgacttcttcgccatcgaggtgcggacc
cggacggatggggccaagtacgcggagctcatcgtggtgcgggagctggaccgggagctg
cgcgccagctacgagctcctgctcacggcctccgacctgggggtgccccagaggtccggc
tcctccgtcctcaagatcagcatctcggactccaacgacaacagcccggccttcgagcag
ccctcttacgtcatccagctcccggaggactccccgctgggcacgctgctcctggacctc
aacgccaccgatccagacgagggcgccaacgggaaggtcgtctacgccttcagcagtcat
gtgccccccagaatcctagagacgttcaagatcgactcagaaacggggcatctgactctc
ttcaggcacgtggactacgaagtcaccaaatcctacgagatcgacgtccaggcccaagac
ctgggccccaattccatcccggcgcactgcaagatcatcatcaaggtggtggacgtcaat
gacaacaggccggagattaacatcaacctcatgtcccccgggaaagaggaaatatcctac
gtctttgaaggggaccccgttgacacgttcgtggccctggtcagggttcaggacaaggat
tccgggctgaacggggaaatcgtgtgcaggcttcacggtcacggccactttaagcttcag
aagacttacgagaacaactatctgatcttgaccaacgccacgctggaccgggagaagagg
tccgagtacagcttgaccgtgatcgccgaggacaaggggacgcccagcctgtcctcggtg
aagcatttcaccgttcagatcaatgacataaacgacaacccaccccgcttccagaggagt
cggtacgaatttgccatctcggagaacaactcgccaggggcctacatcaccacggtcaca
gccacagaccccgacctgggagaaaacgggcaggtgacctacaccatcctggagagtttt
atcctgggaagctccataacgacctacgtgaccatcgacccatccaatggagccatctac
gccctcagaatcttcgatcacgaggaggtgagtcagatccctttcgtggtcgaagcaaga
gatggaggaagcccaaagcaactggcaagcaacaccacagtcgtgctcaccgtcatcgat
gagaatgacaacgtccccgtcgttatagggcccgcgctgcgcaacaacactgcggaaatc
tccatacccaagggggccgagagtggcttccacgtcacaaggatcagggcaattgacaga
gactccggggtgaatgctgagctcagttgctccatagtagcgggcaacgaggagaacacc
ttcctaattgacccacggtcatgcgacatccacaccaacgtgagcatggagtcggttccc
cacacggagtgggagctcgccgttgtcatccaggacaagggcagtcctcagctgcacacc
agagtcctcctgaagtgcgtgatctttgagtacgccgagtccgtgaccagtacagcaatg
acctcagtaagccaggcgtctctggatgtctccatgattataataatctccctaggagca
atttgtgccgtgctgttggtcatcatggtgctgtttgcaactcggtgtaaccgagaaaag
aaggacactagatcctacaactgcagggtggccgaatccacttaccagcaccacccgaag
aggccatccaggcagattcacaaaggggacattacgctggtgcctaccatgaatggcact
ctgcccatcaggtctcatcacaggtcatctccgtcttcctctccaaccttggaaagaggg
cagatgggcagccggcagagtcaccacagtcaccagtccctcaacagtttggtgaccatc
tcgtccaaccacgtgccagagaatttctccctagagctcacccatgccactccggctgtt
gagcaggtctcccagcttctctcaatgctccaccaggggcaatatcagccaaggccaagt
tttcgaggcaacaaatattccaggagctatagatacgccctccaagacatggacaaattt
agcttgaaagacagtggccgtggtgacagtgaagcaggagacagtgattatgatttgggg
cgagattcaccaattgacaggctgctgggtgaaggattcagtgacctgtttcttactgat
ggaagaattccggcagcgatgaggctttgcacggaggagtgcagggtcctgggacactct
gaccagtgttggatgccaccactgccctcgccatcctccgactataggagtaacatgttc
attccgggggaggacttcccagcacagccccagcagcagcatccgcacccgagtctggag
gaggacaccccgcctgcagattctggtgagaagaagaagagtttttccacctttgggaag
gactccccaaacgaggaggactccggggacaccagcacatcctctctgctctcggagatg
agcagtgtgttccagcgcctcttgcccccttccctggacacctatcccgagggtggcgag
gtggaccggtccaactctctggaacgtcggaagggacccctgccagccaagacggtgggt
tacccccaaggtgtggccgcctgggcggccagtacccatttccaaaatcctaccaacagc
tctggtcccccgcttgggacccactccagcgtgcagccttcttcgaagtggctgccggcc
atggaggagatccccgagaattatgaagaagatgactttgacaatgtgctcaatcatctc
aacgatgggaagcacgaactcatggatgccagcgagttggtggctgagattaacaaactg
ctccaggacgtccgccagagctag

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