KEGG   Canis lupus dingo (dingo): 112669459
Entry
112669459         CDS       T08371                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03410  Base excision repair
clud04140  Autophagy - animal
clud04217  Necroptosis
clud04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112669459 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112669459 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    112669459 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    112669459 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clud03036]
    112669459 (HMGB1)
   03400 DNA repair and recombination proteins [BR:clud03400]
    112669459 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clud04147]
    112669459 (HMGB1)
Chromosome and associated proteins [BR:clud03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    112669459 (HMGB1)
DNA repair and recombination proteins [BR:clud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     112669459 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     112669459 (HMGB1)
Exosome [BR:clud04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112669459 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 112669459
NCBI-ProteinID: XP_025318369
Ensembl: ENSCAFG00020025123
UniProt: A0A8C0R7L8
LinkDB
Position
25:9409754..9537547
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagaaaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggctaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatcccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccctcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagagcatcccggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgctaagctgaaggaaaaatatgaaaaggatattgct
gcgtaccgagctaaaggaaagcctgatgcggcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagacgaggaggatgaagaggatgaggaggaggaa
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa

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