Canis lupus dingo (dingo): 112669459
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Entry
112669459 CDS
T08371
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03410
Base excision repair
clud04140
Autophagy - animal
clud04217
Necroptosis
clud04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112669459 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112669459 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
112669459 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
112669459 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clud03036
]
112669459 (HMGB1)
03400 DNA repair and recombination proteins [BR:
clud03400
]
112669459 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clud04147
]
112669459 (HMGB1)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
112669459 (HMGB1)
DNA repair and recombination proteins [BR:
clud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
112669459 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
112669459 (HMGB1)
Exosome [BR:
clud04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112669459 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
112669459
NCBI-ProteinID:
XP_025318369
Ensembl:
ENSCAFG00020025123
UniProt:
A0A8C0R7L8
LinkDB
All DBs
Position
25:9409754..9537547
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagaaaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggctaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatcccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccctcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagagcatcccggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgctaagctgaaggaaaaatatgaaaaggatattgct
gcgtaccgagctaaaggaaagcctgatgcggcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagacgaggaggatgaagaggatgaggaggaggaa
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system