Canis lupus dingo (dingo): 112669822
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Entry
112669822 CDS
T08371
Symbol
COL4A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04151
PI3K-Akt signaling pathway
clud04382
Cornified envelope formation
clud04510
Focal adhesion
clud04512
ECM-receptor interaction
clud04518
Integrin signaling
clud04820
Cytoskeleton in muscle cells
clud04926
Relaxin signaling pathway
clud04933
AGE-RAGE signaling pathway in diabetic complications
clud04974
Protein digestion and absorption
clud05146
Amoebiasis
clud05165
Human papillomavirus infection
clud05200
Pathways in cancer
clud05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112669822 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112669822 (COL4A3)
04518 Integrin signaling
112669822 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112669822 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112669822 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112669822 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
112669822 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
112669822 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112669822 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
112669822 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112669822 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
112669822 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112669822 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clud04147
]
112669822 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112669822 (COL4A3)
Exosome [BR:
clud04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112669822 (COL4A3)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112669822 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112669822
NCBI-ProteinID:
XP_025319056
LinkDB
All DBs
Position
25:40088549..40219021
Genome browser
AA seq
1670 aa
AA seq
DB search
MRPGTAPRPPALLLPLVLVLLAAAPTTGKGCVCKDKGQCFCDGLEGEKGERGFPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGPP
GVPGCNGSKGEQGFPGLPGTPGYPGIPGAVGLKGEKGAPATEGIELDGRGDPGLPGAPGF
QGLPGLPGFPGPAGPPGPPGFLGFPGAMGPPGPKGQMGDKVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTDLKGEKGDKGAMGXPGPPGPSGPPGESYGSEKGAPGEPGPQGKPGK
DGAPGFPGTEGPKGNRGFPGLRGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDEGIPGP
PGPKGARGPQGPSGPPGVLGSAGSSKPGLRGAPGSPGMKGRKGEQGPPGKNAVGPPGSPG
CPGSPGPIGLPGYPGPPGDIVFRKGPPGVGGLPGHVGFPGIPGVEGPKGEPGLLCVQCAY
IPGRPGLPGLPGLDGIKGIPGGQGAAGIKGSPGSPGSAGLPGFPGFPGAPGAPGLKGEKG
ETSEPEGQVGAPGDPGLRGHPGRKGLDGIPGTPGIKGPPGPKGEPALSGEKGDQGPPGDP
GIPGSPGPAGPPGPPNYGPQGEPGPKGTQGVPGAPGPPGEAGPKGEFGISTPVPGPPGPP
GPPGYAGPRGPPGIPGSIGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGAKGAPG
CPGEMGKPGSPGEPGLPGAKGEPGLAIPGEPGIPGFPGERGNSGENGEIGLPGLPGLPGI
PGTGGLDGPPGDPGKPGPPGEKGPPGSCTEGPRGAHGLPGLNGLEGQPGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEIGPPGQKGYPGNPGFLGLPGEKGMMGMMGYPGNTG
PPGPPGIPGTPGQRGSFGIPGAKGEKGPPGAKGEEGEKGPMGPCQITSSVGDKGEPGLKG
FAGKPGEKGNRGIPGLPGLKGFEGPPGPPGPPGPRGDPGSIGNPGEAGPRGSPGNMGNMG
MPGLKGHRGPLGLPGVTGRPGLPGVHGLQGDKGEPGYSAGTRPGPPGLKGDPGLPGAMGR
KGERGLPGTPGHSGPAGTEGAPGHPGSPGHPGKPGPDGDLGLKGIKGFPGSPGVKGPPGP
PGILGSPGPMGMRGNQGRDGIPGPPGEKGETGLLGAHPGPGGIPGPPGAKGDRGAPGLPG
PPGRKGAVGDAGPRGPTGMTGLPGPPGFPGAVIPGQKGNRGPPGFRGNPGEPGPPGPPGS
HVKGIKGDKGLMGEPGPRGLPGTVGDKGPPGQPGAPGSPGLPGLRGDPGFYGFPGVKGEK
GNPGFPGPAGPPGQIGPKGPPGVRGDPGTVKIISLPGSPGPPGRAGGPGMPGEPGPPGPP
GILGPCGPRGKPGMDGIPGTPGPIGEKGNKGCKGEQGPPGLDGLPGLKGDXGDPGPPATG
TMKRGFIFTRHSQTTVIPSCPEGTAPLYSGFSLLFIQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNINNVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPTIAIAI
HSQTTDIPSCPNGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPQRMFRKPIPSTTKAGELEKIISRCRVCMKRRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgggacggcgccccggccgcccgcgctgctgctgccgctcgtgctcgtgctc
ctggcggcggcgcccacgacgggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgcgacgggctggaaggggagaagggggaaagaggctttcctggacctgctggttctcct
ggccagaagggattcccaggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggacttccaggactcactggtcccaaaggtgtaaggggaataactggcttgccggga
ttttcaggtcctcctggacttccaggcaccccaggccatcctgggccttatgggcctcca
ggtgtaccaggatgcaatggttctaagggtgagcaagggtttccaggccttccagggaca
ccaggctacccagggatcccgggtgctgttggcttgaaaggagaaaaaggtgctcctgcc
acagaaggtatagaacttgatggaagaggtgaccctgggttgccaggagctccaggattc
cagggtttaccaggccttccaggctttccgggacctgctggtccacctggccctccggga
ttcttaggctttccaggagccatgggacctccaggacctaagggtcaaatgggcgataaa
gtgataggacaaaaaggagagcggggtgtgaaaggattaacaggacctcccggaccacca
ggaacagttattgtgacgctaaccggccctgataacagaacggacctcaagggggagaag
ggagacaagggagccatggganagcctggacctcctgggccctcgggaccgcctggagaa
tcctatggatctgaaaaaggtgctcctggagaacctggcccgcagggaaaacctggcaaa
gatggtgcccctggtttccctggcactgaggggcccaaaggcaacagaggcttccctggg
ttacggggtgaagacggcattaaggggtggaaaggggacattggcccgccaggatttcgt
ggtccaacagaatattatgatgcataccaggaaaagggtgatgaaggaattccaggccca
ccaggccccaaaggagctcgtggcccccagggtcccagcggtccccctggagttcttgga
agtgctgggtcatcaaagcctggccttagaggagctcctggatctccaggcatgaaagga
cgtaaaggggaacaagggcccccgggaaagaatgcagtggggcctcctgggtccccaggt
tgtcctggttcaccaggccccatagggctgccgggatatccaggaccaccaggtgacatc
gtgtttcgcaaaggtccacctggggttggtggactccccggccatgttgggtttccaggc
atcccaggagtcgaggggcccaaaggggaaccaggcctcttgtgcgtacagtgtgcttat
atcccagggcgtccaggtctcccaggactgccagggttggatggcataaaaggaatccca
ggaggacaaggggcagctggcattaaaggaagcccagggtccccaggaagtgcgggtctt
ccaggatttccaggattcccgggtgctccgggtgctccaggacttaaaggagaaaaagga
gaaacatctgagcctgagggacaggtgggtgctccaggggaccccgggctcagaggccat
cctggaagaaagggcttggatggaattcctggaactcctggaattaaaggaccaccagga
cccaaaggtgaaccggccctgagtggtgagaagggggaccagggtcctccaggggatcct
gggatcccagggtccccaggacctgcaggaccacctggaccaccaaactatggaccacag
ggagagcctggtccaaagggcacccaaggagttcctggagcccctggaccacctggagaa
gccggtcctaagggagaattcggtatttcgacaccagtcccagggcccccaggacctcca
gggccccctggttatgctggcccccgaggtccacctggtatccctggatccataggaaaa
tgtggtgatccgggtcttcctgggcctgatggtgaaccaggaattccaggaattggcttc
cctgggccccctggacctaagggagaccaaggttttccaggagcaaaaggagcaccgggt
tgtccaggagaaatggggaagcccgggtcacctggagaaccaggtctcccaggagccaag
ggagaaccaggactagccatacctggagaaccaggaataccaggttttccaggagaaaga
ggcaattctggggaaaatggagaaattggactccctggacttccaggtctccctggaatt
ccaggaactggagggcttgatggaccaccaggggatccagggaagcctggaccacctgga
gaaaaaggacccccaggaagttgcacagagggtcccagaggagcccacggacttccagga
ttaaatggattggaagggcaaccaggcagaagaggtgaaacagggccaaaaggagaccca
ggtattccaggcttggatagatcaggctttcctggagaacctggaccaccaggaatgcca
ggtcatcgaggtgagataggaccacctggccaaaaaggatatccaggaaatccgggattt
ttaggactaccaggtgaaaaaggaatgatggggatgatgggctatccaggaaacactggc
cctcctgggcctcccgggatcccaggcaccccaggacagaggggtagctttggaattcca
ggtgcaaagggtgagaaagggcccccaggagccaagggggaagaaggagagaaaggacct
atggggccttgtcaaataaccagctcagtgggggacaaaggagaaccaggcctcaaaggg
tttgcaggaaagccgggtgaaaaaggaaacagaggcattccagggttaccaggtttgaaa
ggattcgaagggccacctggaccaccaggcccaccaggcccccgaggagatccaggcagc
attgggaatcctggagaagcaggaccacgtggaagtccaggaaacatggggaacatgggg
atgccaggtcttaaaggacacaggggacctttgggactaccaggtgtcactggaagacca
ggcctcccaggtgttcacggtctccaaggagacaagggagagccaggttattcagcaggt
acaaggccaggaccaccgggactaaagggagatccaggattaccaggtgccatgggaagg
aaaggagaaagagggctacctggcacccctggccattcggggcctgctggaactgaggga
gcccctggacatcccggaagtcctggccacccaggaaagccaggccctgatggagatttg
gggttaaaaggcatcaaaggcttccctgggtccccaggagtcaaaggacctccaggacct
ccaggaatcctaggatctcctggacctatgggcatgagaggcaaccagggccgtgatgga
atccctggtcccccaggagaaaagggagaaacaggtttgctgggggcacatccaggccca
ggagggatccctggtcctccaggagccaaaggagacaggggcgccccaggcctaccaggc
cccccaggcaggaaaggggcagtgggagatgccgggccacggggacccactggcatgacg
ggactcccagggccaccaggttttcctggtgcagtcatccctggccagaaaggaaatcga
ggtccaccaggcttcagaggaaacccaggtgagcctggtcctccaggccctccagggagc
cacgtgaaaggcataaaaggagacaagggactcatgggtgagcctggccccagaggtcta
cctggaactgtgggagacaaggggccaccgggtcaaccgggagcaccagggagcccaggt
ctgccagggctcaggggcgatcctggattctatggatttccaggtgttaaaggagagaag
ggtaacccaggatttccgggaccagctggacctccagggcaaattgggccaaaaggacca
cctggtgtccgtggagaccctggcacagttaagatcatctcccttccaggaagcccaggg
ccacctggccgtgctggaggaccggggatgccaggagaaccagggccaccagggccacca
ggaatcctaggaccctgtggaccaagaggtaaaccaggcatggatggaataccaggaact
cctgggccaattggagaaaaaggcaacaaaggttgtaaaggcgagcaaggaccacctgga
ttagatggactgccaggcttgaagggagacnctggagaccctggaccacctgcaactggg
accatgaagaggggctttatcttcaccaggcatagtcagaccacagtgattccttcctgt
ccagaagggacagcgccactctatagtggcttttctcttcttttcatacaaggaaatgaa
caagcccatggacaagacttgggaactctcggcagctgcctgcagcgatttaccacaatg
ccattcttgttctgtaacatcaacaatgtctgtaattttgcatctcgaaatgactactca
tactggctgtcaacaccagctctgatgccaatggacatggctccaattactggcagggcc
ctggagccttatattagcagatgcactgtctgtgaaggtcctacgattgccatagccatt
cacagccaaaccactgacattccctcatgtcccaatggctggatttctctctggaaagga
ttttcgtttatcatgttcacaagtgcaggttctgagggtgctgggcaagcactggcctcc
cccggctcctgcctggaagagttccgagccagtccgtttatagaatgtcacggaagagga
acgtgcaactactattcaaattcctacagtttctggttggcttcgttaaacccccaaaga
atgttcagaaaacctattccatcaactacgaaagctggggagttagaaaagataataagt
cgctgtcgggtgtgcatgaagagaagacaatga
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