Canis lupus dingo (dingo): 112670454
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Entry
112670454 CDS
T08371
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112670454 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112670454 (CNOT4)
03019 Messenger RNA biogenesis [BR:
clud03019
]
112670454 (CNOT4)
04121 Ubiquitin system [BR:
clud04121
]
112670454 (CNOT4)
Enzymes [BR:
clud01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112670454 (CNOT4)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
112670454 (CNOT4)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112670454 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112670454 (CNOT4)
Ubiquitin system [BR:
clud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112670454 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Rtf2
Nup35_RRM_2
DZR_2
zf-CCCH_2
Torus
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112670454
NCBI-ProteinID:
XP_025319917
Ensembl:
ENSCAFG00020000093
LinkDB
All DBs
Position
16:complement(12573293..12710428)
Genome browser
AA seq
713 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAPTNANSLNSTFSVLPQRFPQFQ
QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
IADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNPATTDSLSW
DSPGSWTDPAIITGIPATSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
STQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcgaaggaagaccctgtggaatgtcctctttgcatggagccc
ttggagatagatgatatcaacttttttccttgcacctgtggctatcagatttgccgattt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaattgcaaaggataaagaat
gagaaaaaacagaagcagaatgagagaaaacagaaaatatcagaaaaccgcaaacatttg
gctagtgtacgtgttgtacaaaaaaaccttgtctttgttgtaggactgtctcagcgccta
gcagatccagaggttttgaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttac
gtaacctacatccggtcagaagatgctctcagagccatacagtgtgtcaacaacgtggta
gtagatggcagaacacttaaggcatctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgcccaaagcctgactgcatgtatctacatgaattgggggatgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaagcaccaagaatatgaacagaaacta
cttcaagaattatataaattaaaccctaattttcttcaactatctacgggttcagttgat
aagaataagaacaaagtgacaccactgcagaggtatgatacccccattgacaaaccttca
gattctctcagtatagggaatggtgataattcccagcagatatctaacagtgatacgcct
tcaccaccacctggtttatcaaaatccaatccagtcatccccatcagttcatccaatcac
agtgcacggtctccttttgaaggggcagtaactgagtcacagtcgttattctcagataat
tttcgccatcccaacccgatcccaagtgggcttcctcctttccccagctccccacagaca
tctagtgactggcctacagcaccagagccacagagtctcttcacatcagaaacaatccca
gtatcatcctctacagactggcaagcagcatttggctttggttcttctaaacaaccagag
gatgacttgggttttgacccctttgatgtcactcgaaaagccttagcagacctgattgaa
aaggaactgtcagtccaagaccagccttccctctcgcccacatctcttcagaactcctct
tcacacactacaaccgccaaaggtccgggctctggattcctgcatcctgctgcaccgaca
aatgccaactctctcaatagtaccttttcagtcttgccacagaggttccctcaatttcag
cagcaccgagcagtttataattcattcagttttccaggccaggcagcccgctatccttgg
atggcctttccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaat
agtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggatccct
atagcagacaacagcagttctgtagagagtttaaatatgaaggaatggcaggacgggcta
agggcacttctacccaacattaacatcaactttggtggactgcccaattcttcctccccc
tccaacgccaaccacagtgcaccaacgtccaaccctgccaccaccgacagcctgagttgg
gacagccctggcagctggacagacccagccatcatcacaggtattccagcaacttcagga
aacagtttagactctcttcaagatgacaatcctccacactggctaaaatcccttcaggcc
ctcacagagatggacggccccagtgctgctccatcacagacccaccacagcgcccccttc
agcacacagatccctctgcacagagccagttggaatccctaccctcctccttcaaatcct
tccagctttcactccccacccccaggctttcagacagccttcagaccccccagcaaaacc
cccacagatttactacagagttccacactggaccgccattag
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