KEGG   Canis lupus dingo (dingo): 112671834
Entry
112671834         CDS       T08371                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud01524  Platinum drug resistance
clud03430  Mismatch repair
clud05200  Pathways in cancer
clud05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:clud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    112671834 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    112671834 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    112671834 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    112671834 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clud03400]
    112671834 (MSH2)
DNA repair and recombination proteins [BR:clud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     112671834 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 Tex_central_region
Other DBs
NCBI-GeneID: 112671834
NCBI-ProteinID: XP_025321960
Ensembl: ENSCAFG00020026414
LinkDB
Position
10:50362708..50439018
AA seq 934 aa
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVIKYLGPAGTKTLESVVLSKMNFESFVKDLLLIRQYRVEVYKNRAGSKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSTSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQYELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVETFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA
LEKYEGKHQGLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGGSQGYDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEVIAKNNSFVNEIISRIKVST
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagcccaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggccgcccgagaggtgttcaagacg
cagggggtaatcaagtacctcgggccggcaggaacaaagaccctggagagtgttgtgctt
agtaaaatgaattttgaatcttttgttaaagatcttcttctaattcgacagtatagagtt
gaagtttacaagaatagagctggaagtaaggcctccaaggagaacgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcaacctccattggtgtcgtgggtgttaaaatgtctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagaggaagctaggactttgtgagttccctgat
aatgatcagttctccaatttggaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaacgaaaaagagctgatttttttacaaaagatatttatcaggac
ttgaaccggttattgaaaggcaaaaagggagaacaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcagcactgtctgcagtaatcaagtttttagaactttta
tcagatgattcaaactttggacagtatgaactcactacttttgacttcagccagtatatg
aagttggatattgcagcagtccgagcccttaaccttttccagggttctgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcagggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagactg
aatttagtggaaacttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttattcgggct
ctggagaaatatgaaggaaaacaccaaggtttattgttggcagtttttgtcactcctctt
attgatcttcgttctgatttctccaaatttcaggaaatgattgaaacaactctagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcccaatctgagtgaa
ttaagggaaataatggatgacttagaaaagaagatgcagtcaacattgataagtgcagca
agagatctaggtttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattattttcgagtaacatgtaaggaagaaaaagtccttcgcaacaataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagcaaactgacttctctcaat
gaagagtataccaaaaataaaaccgagtacgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtcgaaccaatgcagacactcaatgatgtgttagct
cagctagacgctgttgtcagcttcgctcatgtgtcaaatggagcacctgttccatatgta
cgaccggtcattttggaaaaaggacaaggaagaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcgc
caaactggggtgatagttctcatggcccagattgggtgttttgtgccgtgtgagtcagca
gaagtgtccattgtggactgcatcttggcccgtgtaggggctggtgacagtcagttgaaa
ggagtctccacatttatggctgaaatgctagagactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagtttcgggattcatgttgcagagcttgcaaatttccctagacatgtt
atagagtgtgctaaacaaaaagccctggaactagaggagtttcagaatattggaggatca
caaggatatgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggc
gaaaaaattattcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaatgaagttaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagtttctacatga

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