Canis lupus dingo (dingo): 112673337
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Entry
112673337 CDS
T08371
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112673337 (COL20A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
YjeF_N
Motif
Other DBs
NCBI-GeneID:
112673337
NCBI-ProteinID:
XP_048956346
Ensembl:
ENSCAFG00020001328
LinkDB
All DBs
Position
24:47088532..47106101
Genome browser
AA seq
1349 aa
AA seq
DB search
MELPDASPGGQAGSPGSVLHAPPPPGTATAPSRALEWLQAAVANGAVPTDPGSPRPVSPA
SGRLRLAVLPEDRLQMKWRESDGSSLGYLVQVKPMAGDAEQEVMLTTKTPKATVGGLSPS
KGYTVQIFELTGSGNALLAQREFVIEDLKSHSGSRSDQKPLGAAPEPTPPDVGCPDPEPL
GTSSPSQDPPTLAGSDWGKAGPQFRCTPPSPVDMIFLVDGSWSIGHSHFQQVKDFLASVI
EPFEIGPSKVQVGLTQYSGDPQTEWDLNALRTKEDVLAAVRRLRYKGGNTFTGLALTHVL
EHNLRPAAGPRPEATKVLILVTDGKSQDDARAAGRILKDLGVAIFAVGVKNADEAELQLL
ASQPLDITVHNVQDFPQLGTLAGLLGRLICQKVQGRSRDPARPAAATPALDTLFTPSSLL
LTQVTSSSAHLSWTPAAQLPLKYLIVWRPLRGGPPREVVVDGPTSSAELHDLAAGTEYSV
SVIPVGKAGVGEGLRGLVTTAPLPPPQALTVAAVTPRTIRLTWRPSAGATQYLVRCLPAS
PAGQEEGREVRVGQPEVLLDGLEPGRDYDVRVQSLQGTEASEARGVRARTSTLAPPRHLG
FSDVSHDSARVFWDGLPRPVRLFRVSFFSSDGSHSGQVEVPGNATSASLGPLSSSTTYAV
RVTCLYPGGGSSTLTGHLTTRKVPSPSQLVVTRLPGDEARLQWAAASGVLVYQIKWTPLG
DGKAHEVSVPGSRAMAVLPGLRSHLEYDITILAYYRDGARSDPVSLRYSPPRRSPPSDLT
LASESPNSLRVSWTPPSGPVLHYRLTYALASGSGPEKSISVPGPRSHVTLPDLLAATKYR
VLVSAVYGAGESPTVSATGRTAACPALSPDSPLPGFDLMRAFGLVEKEYASVRGVAMEPS
AFGRARTFTILRDAQLSRRASAPHLAAPPPEHTVVFLLRVLPETPRETFALWQMTADDFQ
PVLGVLLDAGRRSLTYFHHDRTAALQEVTFDLPEVKRIFFGSFHKVHVAVGRSKVGLYVD
CRKVAERPIGEAGSPPAAGFMMLGRLAKARGPRSSSASFQLQMLQIVCNDSWADEDVCCE
LPASKDGETCPAFASACTCASQTPALPGPQGPPGLPGRNGAPGERGFPGPRGEPGPPGQM
GPEGPGGQQGSPGTQGRTVQGPVGPPGVKGEKGDHGLPGLQGHPGHQGTPGKVGLQGPKG
MRGLEGSAGLPGPPGPRGFQGMAGARGTAGERGPPGAVGPTGLPGPKGERGEKGEPQSLA
TISQLLSRVCESAIQTHVLKLHSFLHESARPPRPILEAPKLPGRGGQDSPRPEDRGEPRT
LGPMGSPRPKGSEPPRPLTGTGRPPCSPQ
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccagacgcttccccgggaggccaggctgggtccccgggctccgtcctccac
gcccctcctcctcccgggacggccacagcacccagcagggccctcgagtggctccaggcc
gcggtcgccaacggggctgttcctaccgatcctggatcaccccgtcctgtctccccagcg
agcggccgcctgaggctggctgtgctgcctgaggaccggctacagatgaagtggagggag
tcggatgggagcagccttggctacctggtccaggtgaagcccatggcaggggacgcggaa
caggaggtgatgctgaccaccaagacccccaaggccacggtggggggcctgagcccctcc
aagggctacaccgtgcagatcttcgagctcaccggctcagggaacgccctgctggcgcag
agggagtttgtgatcgaggatttgaagagtcactctgggagcaggagcgaccagaagccc
ctgggggccgccccggagcccacgccccccgacgtggggtgcccggaccctgagcccctg
ggcacctcgtccccaagccaagacccgcccaccctcgctggttcagactggggcaaggcc
ggcccccagttccgctgcacaccccccagccccgtggacatgatcttcctggtggacggg
tcctggagcatcggccacagtcacttccagcaggtcaaagatttcctggccagcgtcatc
gagccctttgaaatcgggccaagtaaagtccaagtcggcttgactcagtacagcggagac
ccccagaccgagtgggacctcaacgccctccgcaccaaggaggacgtgctggcagctgtc
cgccgtctgcgctacaaagggggaaacacgttcaccggcctggcgctgacgcacgtgctc
gagcacaacctgcggcccgcagcggggccccggcctgaggccaccaaggtgctgatcctg
gtgacagacggcaaatcccaggacgatgcccgcgccgctggccgcatcctcaaggacctg
ggtgttgccatctttgctgtgggtgtgaagaacgcggacgaggctgagctgcagctcctg
gcgtcccagccactggacatcaccgtccacaacgtgcaggacttcccgcagctcggcacc
ttggccggcttgctcggccgcctcatctgccagaaggtccagggcaggagcagggacccg
gcccggccggcagcagccacccccgccctggacaccctcttcactcccagcagcctgctg
ttgacccaggtgacctcctccagcgcccacctgtcctggactccagccgcccagctgccc
ctcaagtatctgatcgtgtggcggcccttgaggggtggcccgccccgggaggtggtggtg
gacgggcccacctcgtccgcggagctgcacgacctggccgccggcacggagtactcggtg
tctgtgatccccgtcggcaaggccggggtcggcgagggcctgcggggcctggtgaccaca
gcgcctctgcccccgccccaggcgctgaccgtggctgcggtgacacccagaaccatccgc
ctcacctggcggccctcggccggggccacacagtacctggtgcgatgcctgccagcctcc
cctgcgggccaggaggagggcagagaggtgcgggtggggcagcccgaggtgctgctggac
ggcctggagcctggcagggactacgatgtccgggtgcagagcttgcagggcacagaggcc
agcgaggcccggggcgtccgcgccaggacctccaccctggcgccccccagacacctgggc
ttctcggatgtgagtcacgactccgcacgcgtgttctgggacggcctcccgaggcccgtc
cgcctgttcagggtcagctttttctccagcgacggcagccactcggggcaggtggaggtt
cccgggaatgccacctcggcctctctgggccctctgtcctcctccaccacgtatgctgtc
cgtgtcacctgcctctaccctgggggcggctcctccacgttgaccggccacctgaccaca
cggaaggtccccagccccagccagctcgtggtgaccaggctccccggggacgaggctcgg
ctgcagtgggcggcagcttccggagtgctcgtctatcagatcaagtggacacccctggga
gacgggaaggcccacgaggtctctgtccccgggagccgggccatggcagtcctgcctggc
ctgcgaagccaccttgagtacgacatcaccatcctggcctactacagggacggggcccgc
agcgacccggtgtccctgcgctacagccccccgcgccgcagcccgccgtctgacctgacc
ctggcttccgagtcgcccaacagcctgcgagtcagctggacgcccccgagcggccccgtc
ctccactaccggctcacctatgcgctggcctcgggctcgggacccgagaagtcgatctct
gtcccaggacccaggagccacgtgacactgcccgacctgctggcagccaccaaatacagg
gtcctggtctcggccgtctacggagcaggggagagtccgacagtgtctgccacaggccgg
accgcagcctgccccgcgctcagccctgacagccccctcccaggcttcgacctcatgagg
gccttcgggctggtggagaaggagtacgcctccgtccgcggtgtcgccatggagccctcg
gctttcggccgcgccaggaccttcaccatcctcagggacgcccagctgagccgccgggcc
agtgccccccacctggctgcgcccccgcccgagcacacggtggtcttcctcctgcgtgtg
ctgcccgagaccccccgggagacctttgcgctgtggcagatgacggccgacgacttccag
cccgtcctgggcgtcctgctggacgcgggcaggaggtctctgacctacttccaccacgac
cgcacggccgccttgcaagaggtcacctttgacctgcccgaagtgaagaggatattcttc
ggaagcttccacaaggtgcacgtggccgtgggccgctccaaggtcgggctgtacgtggac
tgcaggaaggtggccgagaggcccatcggggaggcgggcagcccgcctgccgccggcttc
atgatgctggggaggctggccaaggcgcgcgggccccggagcagctccgcctcattccag
ctccagatgctgcagatcgtgtgcaatgactcctgggcagacgaagacgtgtgctgcgag
ctccctgcgtcgaaggacggagagacctgcccggccttcgcgtctgcctgcacctgcgcc
tcgcagacccccgcgctcccggggccccaaggacctccgggcctccctggaaggaacgga
gccccaggagagcggggcttcccggggcccaggggagagcctgggccacccggacagatg
ggaccagagggtcctggaggtcagcagggctcgccagggacccagggccggactgtgcag
ggacctgtgggcccgccgggggtcaaaggagagaagggggaccatgggctcccgggcctg
cagggccaccccggtcaccagggcacccccgggaaggtcggcctccagggaccaaaggga
atgagaggcctggaggggagcgctggcctgcctggaccccccggcccgaggggcttccag
ggcatggcgggagccaggggcaccgcaggggagagaggccccccgggggccgtggggccc
acggggctgccgggacccaaaggggagcgaggagagaagggcgagccacagtccctggcc
accatctcccagctgctgagccgggtctgcgagtctgccatccagactcacgtgctgaag
ctccactccttcctccacgagagcgccaggcccccccggcccatcttggaggcgcccaag
ctccctggacgaggaggacaggacagtccccgccccgaggacagaggcgagcccagaacc
ctcggtcccatgggcagccctcggccgaaagggagcgagcctccaagacccctgacagga
acgggacggcccccgtgctccccacagtga
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