Canis lupus dingo (dingo): 112673879
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Entry
112673879 CDS
T08371
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clud03041
]
112673879 (RBM39)
Spliceosome [BR:
clud03041
]
Common components
Common spliceosomal components
General mRNP proteins
112673879 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
112673879
NCBI-ProteinID:
XP_025325687
Ensembl:
ENSCAFG00020005676
UniProt:
A0A8C0JW07
LinkDB
All DBs
Position
24:complement(24665683..24695115)
Genome browser
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgcaaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagtcgcgaaaggaagcgaagtaggagcaaagaaaggaga
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgctcccgaagcaaaagtccattcagaaaagacaagagccccgtgagggaa
cctattgataatctaactcctgaggaaagagatgcaaggacagttttttgcatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttctctacagtaggcaaggttcga
gatgtgagaatgatttctgatcgaaattcaagacgttccaaaggaattgcatatgtggag
tttgtggatgttagctcagtgcctctagcaataggattaactggccaacgtgttttaggt
gtgccaatcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctcattacactttaac
ataactgaagatatgcttcgggggatctttgagccttttgggagaattgaaagtatccaa
ctcatgatggatagtgaaacaggtcgatctaagggatatggatttattacgttttccgat
tcagaatgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaagacca
atgaaagttggtcatgttactgaacgtacagatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtctccaattaatg
gcaaggcttgcagaaggtacaggtttgcagattccaccagcagcacagcaggctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagactgaagcttcagctttagctgcagctgcctctgttcagcct
cttgcaacacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattctgctcagggcaacgtgtatgtgaagtgcccatca
attgcagcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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