Canis lupus dingo (dingo): 112674675
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Entry
112674675 CDS
T08371
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04622
RIG-I-like receptor signaling pathway
clud05161
Hepatitis B
clud05162
Measles
clud05164
Influenza A
clud05168
Herpes simplex virus 1 infection
clud05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
112674675 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
112674675 (IFIH1)
05171 Coronavirus disease - COVID-19
112674675 (IFIH1)
05164 Influenza A
112674675 (IFIH1)
05162 Measles
112674675 (IFIH1)
05168 Herpes simplex virus 1 infection
112674675 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clud04054
]
112674675 (IFIH1)
Enzymes [BR:
clud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112674675 (IFIH1)
Pattern recognition receptors [BR:
clud04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
112674675 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
SNF2-rel_dom
Sigma70_ner
Arg_decarbox_C
Cas3-like_C_2
DUF3638
Motif
Other DBs
NCBI-GeneID:
112674675
NCBI-ProteinID:
XP_025326833
Ensembl:
ENSCAFG00020004329
UniProt:
A0A8C0JSV1
LinkDB
All DBs
Position
36:complement(7832417..7889732)
Genome browser
AA seq
1029 aa
AA seq
DB search
MWSGRPSADQSFRHLLSCFRARVKTYIQVEPVLDYLNFLPEEVKEQIQRKAANAGNLQAA
ELLLSTLEKGAWPPGWTRQVLVALQSAGSVLASRYLNPELADLPSPSAENAHDQCLQLLN
LLQPTLVDRLLVKDVLDKCVEKKLLTDEDRDRISAAENNGNQSGVRELLKRIVQKENWFS
LFLTVLNQTENYALVQELTGTTCFESKEETENLSQEDGPEVKAAALLAMSQPSPEKEGWD
MENNSLESSLLDSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAER
ASPEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKV
IVLVNKVPLVEQLFREEFEPFLKKWYHTIGLSGDTQLKISFPEIVKTYDVIISTAQILEN
SLLNSEKGEDDGVQFSDFTLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKEYKPVI
PLPQILGLTASPGVRGAKRQAEAQQHILKICANLDACTIITVKENINQLKGQMKEPCKKF
AIADDTREDPFKDKLLEIMNKIQSFCQMSPMSDFGTQPYEQWTIQMEKKAAREGNRKDRV
CAEHLRKYNEALQINDTIRTIDAYNHLEAFYNDETEKKLAVQEGDSDESGEDGDGDGDGD
EAEDDEKRPLRLDRTDRFLMELFWENKRMLKKLAQNPKHENEKLIKLRNTIMEQFTRTEE
PARGIIFTKTRQSAFALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISK
FRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSN
SGVIEREIVNDFREKMMYKAIDHVQNMNPEEYAHKILELQMQSIMEKKMKIKRSAAKCYK
ENPSLINFLCKNCSVLACSGEDIHVIEKMHHVNMTPVFKELYIVRENKALRKKFIDYQTN
GEIICKMCGQAWGTMMVHKGLDLPCLKIKNFVVIFKNNTSKKQYKKWVELPIAFPDLDYS
EYCLFSDED
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcggccgcccctccgcggaccagagcttccgccatctcctgtcgtgcttcagg
gcgcgggtgaaaacgtacatccaggtggagccggtcctggactacctgaacttcctgccc
gaggaggtgaaggagcagattcagaggaaggcggccaacgccgggaacctgcaggcggcc
gagctgctgctgagcaccctggagaagggagcctggccccccggctggacccgccaggtc
ctggtggcccttcagagcgcgggcagcgtcctggcctcgcgctacctgaaccccgagctc
gccgacctgccctcgccgtccgccgagaacgcccacgaccagtgcctgcagctgctgaac
ctcctgcagcccacgctggtggacaggcttctggtcaaagacgtcttggacaagtgcgtg
gagaagaagctgctgaccgatgaggacagagaccggatctctgctgctgaaaacaatgga
aatcaatcaggtgtaagagagcttctgaaaaggatcgtgcagaaagaaaactggttttct
ttatttctgactgttctgaatcaaacggagaactatgcccttgtccaagagctaacaggc
acaacttgctttgaaagcaaagaagagactgagaatttatcacaagaagatggccctgaa
gttaaagcggcagctcttttagctatgagtcagccaagtccagagaaagagggctgggac
atggaaaataattcactggaatcatctttgctggattcttctgtagtttcagaatcagac
acaagtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaac
atgggcagtgattcaggcaccatgggaagtgattcagatgaagagaatgtggcagaaaga
gcatcccctgagccagaactgcatctcaggccttaccaaatggaagtcgcccaaccagcc
ttggaggggaaaaatatcattatatgcctccctacagggagtgggaaaaccagagtggct
gtttacattgccaaggatcacttggacaagaagaaaaaagcatctgaacctggaaaagtc
atagtccttgtcaataaggtaccactagttgaacagcttttccgtgaagagtttgaacca
tttttgaagaaatggtatcatactattggattaagtggtgatacccaattgaaaatatca
tttccagaaattgtcaaaacctatgatgttatcatcagtacagctcaaatccttgaaaac
tcccttttaaactcagaaaaaggagaagatgatggtgtccaattttcagactttaccctc
atcatcattgacgaatgtcatcacaccaacaaagaagcagtctataataacatcatgaga
cgttacttgaaacagaagttgaaaaataataaactcaagaaagaatacaagccagtgatt
cctctacctcagatactaggactaacagcttcaccaggtgttcgaggagccaaaaggcaa
gctgaagcccagcaacacattttaaaaatatgtgccaatctcgatgcatgtaccattata
actgtgaaagaaaatatcaatcaactcaaaggccaaatgaaagagccatgtaaaaagttt
gcaatcgcagatgacaccagagaagatccatttaaagataaacttttagaaataatgaac
aagattcaaagtttttgccaaatgagtccaatgtcagattttggaactcaaccctatgaa
caatggaccattcaaatggaaaaaaaagctgcacgagaaggaaatcgaaaagaccgtgtt
tgtgcagagcatttgaggaagtacaatgaggccctacaaattaatgatacaattcgaacg
attgatgcatataatcaccttgaagctttctataatgatgagacagagaagaagcttgca
gtccaagaaggtgatagtgatgagagtggtgaggatggtgacggtgacggtgatggtgat
gaagctgaggatgatgaaaagagacctttgagactggataggacagatagatttctcatg
gagttattttgggaaaacaagagaatgttgaaaaagctggctcaaaacccaaaacatgaa
aatgaaaagctgatcaaattaagaaacaccataatggaacaatttacaaggactgaggaa
ccggcccgaggaataattttcacaaaaacacgacagagtgcatttgccctttcccagtgg
attactgaaaataaaaaatttgcagaggtaggagtcaaagcccatcatctaattggagct
ggacacagcagcgagttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaa
ttccgcacaggaaaaataaatctgcttatcgctaccacagtggcagaagaaggtctggat
attaaagaatgtaatatcgtcatccgttatggtctcgtcactaatgaaatagctatggtc
caggcccgtggtcgagccagagctgatgagagcacctacgtcctggttgcccacagtaac
tcaggggttattgaacgtgagatagttaatgatttccgagagaaaatgatgtataaagct
atagaccatgttcaaaatatgaatccagaggagtatgctcataagattttggaactacag
atgcaaagtatcatggaaaagaaaatgaaaatcaagagaagtgctgcaaagtgttacaag
gaaaacccgtcattaataaatttcctttgcaaaaactgcagtgtgctagcctgctctggg
gaagatatccacgttattgagaagatgcaccatgtcaacatgacaccggtattcaaggaa
ctctacattgtgagagaaaacaaagcactacgaaagaagtttatagactatcaaacaaat
ggcgagatcatctgcaaaatgtgtggccaagcctggggaacgatgatggtgcacaagggc
ttagatttgccttgtctcaaaataaagaattttgtagtgattttcaaaaataatacatca
aagaaacaatacaaaaagtgggtagaattacctatcgcttttcccgatcttgactactca
gaatactgtttgtttagtgatgaggattga
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