Canis lupus dingo (dingo): 112675330
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Entry
112675330 CDS
T08371
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X2
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03082
ATP-dependent chromatin remodeling
clud05165
Human papillomavirus infection
clud05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112675330 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
112675330 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112675330 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clud03036
]
112675330 (CHD4)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112675330 (CHD4)
Chromatin remodeling factors
NuRD complex
112675330 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
112675330
NCBI-ProteinID:
XP_025327670
Ensembl:
ENSCAFG00020002892
LinkDB
All DBs
Position
27:38633916..38662277
Genome browser
AA seq
1913 aa
AA seq
DB search
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPEEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKA
FSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESM
VTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGG
FGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVT
AVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ
WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL
PEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPE
RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKN
KDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVE
IQDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLD
ATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLV
SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE
ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL
TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKA
DVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCN
HPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLD
LLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVR
PGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDR
NQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDER
SEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFT
TQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMS
LIRKKVQEFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPA
EDGIKIEENSLKEEESVEGEKEVKSTAPEATVECTQPPAPASEDEKVLVEPPEVEEKVEK
AEVKERTEEPMETEPKGVADVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETP
KDLNDEKQKKNIKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAG
IINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLR
RAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKGILKQLEE
LLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPTPQQVAQQQ
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctccccgtccccctgctccgcgggcagcgaggaggaagatatg
gatgcacttttgaacaacagcctgcccccaccccacccagaaaatgaagaggacccagaa
gaggatttgtcagaagcagagactccaaagctcaagaagaagaaaaagcctaagaaacct
cgggaccctaaaatccctaagagcaaacgccaaaaaaaggagcgtatgctcttatgccgg
cagctgggggacagctctggggaggggccggagtttgtggaggaggaggaagaggtggct
cttcgctcagacagtgagggcagcgactatacccctggcaagaagaagaagaagaagctt
ggacctaagaaagaaaagaagagcaaatccaagcggaaggaagaggaagaagaggatgac
gacgacgatgattcaaaggagcctaaatcatctgctcagctcctagaagactggggcatg
gaagacattgaccatgtgttctcagaggaggattatcgtaccctcaccaactacaaggcc
ttcagccagtttgtccgacccctcattgctgccaaaaatcccaagattgctgtctccaaa
atgatgatggttttgggtgcaaagtggcgtgagttcagtaccaacaatcccttcaaaggc
agttctggggcttcagtggcggcagcagcagcagcagcggtggctgtggtggagagcatg
gtgacggccactgaagttgcaccacctcctcccccggtggaggtccctatccgcaaggcc
aagaccaaggagggcaaaggtcccaatgctcggaggaagccaaagggcagccctcgtgta
cctgatgccaagaagcctaaacctaagaaagtagctcccctgaaaatcaagctgggaggt
tttggttctaagcgtaagagatcctcgagtgaggatgatgacttagatgtggaatctgac
ttcgatgatgccagtatcaatagctattctgtttctgacggttccaccagccgcagtagc
cgcagccgcaagaaactccgaaccactaaaaagaaaaagaaaggcgaggaggaggtgact
gctgtggatggttatgagacagaccaccaggactattgcgaggtgtgccagcaaggcggt
gagatcatcctgtgtgatacctgtccccgagcttaccacatggtctgcctggatccggat
atggagaaggctcctgagggcaagtggagctgtccacactgcgagaaggaaggcatccag
tgggaggctaaagaggacaattcagagggtgaggagatcctggaagaggttggaggagac
cctgaagaggaggatgaccaccatatggaattctgtcgtgtctgtaaggatggtggggag
ttgctctgctgcgacacttgtccttcatcttaccacatccactgcctgaaccccccactg
ccagagatccctaatggtgaatggctctgtccccgttgtacgtgtccagctcttaagggc
aaagttcagaagattctaatctggaaatggggtcagccaccatctcccacaccagtgcct
cggcctccagatgctgatcccaatactccctctcccaagcccctggaggggcggccagag
cggcaattctttgtgaagtggcaaggcatgtcttattggcactgctcctgggtatctgaa
ctgcagttggagctgcactgtcaagtgatgttccgaaactatcagcggaagaatgatatg
gatgaaccaccttctggggactttggtggtgatgaagagaagagccggaagcgtaagaac
aaagaccctaaatttgcagaaatggaggaacgcttctatcgctatggcataaaacctgag
tggatgatgatccaccgaattctcaaccacagtgtggacaagaagggccacgtccactac
ttgatcaaatggcgggacttgccctacgatcaggcatcctgggagagtgaggatgtggag
atacaggactacgacctcttcaagcagagctattggaaccacagggagttaatgaggggt
gaggaaggacgaccaggcaagaagctcaagaaggtgaagctgaggaagttggagaggcct
cctgaaactcctacagttgatccaacagtgaagtatgagcgacagccagagtacctggat
gctacagggggaaccctgcacccctatcaaatggagggcttgaactggttgcgcttctcc
tgggctcaaggcaccgacaccatcttggctgatgagatgggccttgggaagactgtccag
acagcagtcttcctctattctctctacaaggagggtcattccaaaggccctttcctagtc
agtgcccctctttctaccatcatcaactgggagcgggagtttgaaatgtgggctccagat
atgtatgtggtgacctatgtgggtgacaaagacagccgtgccatcatccgagagaatgag
ttctcctttgaagacaacgccattcgtggtggcaagaaagcctctcgtatgaagaaagag
gcatctgtgaaattccacgtgctgctgacatcttatgaattgatcaccattgacatggct
atcttgggttccattgattgggcctgccttatcgtggatgaagcgcatcgtctcaagaac
aatcagtcaaagttcttccgggtcttaaatggttactcactccaacacaagctgttgctg
actgggactccgttacaaaacaatctagaagagttgtttcatttgctcaactttctcacc
cctgagagattccacaatttagaaggcttcttggaggagtttgctgacattgccaaggag
gaccagattaaaaaactgcatgatatgctgggccctcatatgttgcggcgtctcaaagct
gatgtgttcaagaatatgccatccaagacagaactgatagtgcgtgtggagctgagcccc
atgcagaagaaatactacaagtacattctcactcgaaactttgaagcactcaatgctcga
ggtggtggcaaccaagtttctctgctaaatgtggtgatggatctgaagaagtgctgcaac
cacccgtacctctttcccgtggctgcaatggaagcccctaaaatgcctaatggcatgtat
gatggcagtgccctaattcgagcatctgggaaattattgctgctacagaagatgctcaag
aaccttaaggagggtgggcaccgtgtactcatcttctctcagatgaccaagatgctagac
ctattagaagatttcttggaacatgaaggttataagtatgaacgtattgacggtgggatt
actgggaatatgcggcaagaggccattgaccgcttcaatgcaccgggtgctcaacagttc
tgctttttgctttccacgcgggctgggggccttggaatcaatctggccactgctgacaca
gttattatctatgactctgactggaacccccataatgacatccaggcttttagcagagct
caccgtattgggcaaaataagaaggtgatgatttatcgatttgtgacccgtgcgtcagtg
gaggagcgcatcacgcaggtggcaaagaagaagatgatgctgacgcatctagtggttcgg
cctgggctgggctccaagactggatccatgtccaaacaagagcttgatgacatcctcaag
tttggcactgaggaactatttaaggatgaagccacagatggaggaggagacaacaaagag
ggggaagatagcagtgttatccactatgatgataaggccattgagcgacttctggaccgt
aaccaagatgagacagaagacacagaactgcagggcatgaatgaatacttgagctcattc
aaagtggcccagtatgtggtgcgggaagaagagatgggggaggaagaggaggtagaacga
gaaatcataaaacaggaagaaagtgtggatcctgactactgggagaaattgctgcggcac
cattatgagcagcagcaagaagatctagcccgaaatttgggcaaaggaaaaagaatccgt
aaacaggtcaactacaatgatggctcccaggaggaccgagattggcaggacgaccagtcc
gacaaccagtccgattattcagtggcctcagaggaaggtgatgaagactttgatgaacgt
tcagaagctccccgcaggcccagccgtaagggcctgcggaatgataaagataagccattg
cctcctctgttggctcgtgttggtggaaatatcgaagtacttggctttaatgctcgccag
cgaaaagcctttcttaatgcaattatgcggtatgggatgccacctcaggatgcttttacc
acccagtggcttgtgagagatctgcgaggcaaatcagagaaagagttcaaggcttacgta
tctcttttcatgcgacatttatgtgagccaggagcagatggggctgagacctttgctgat
ggtgtcccccgagaaggcttgtctcgccagcatgtccttaccaggattggtgtcatgtcc
ttgattcgaaagaaggttcaggagtttgaacatgtcaatgggcgttggagcatgcctgag
cttgctgaagtagaagaaaataagaaaatgtcccagccagggtcaccttctccaaagact
cctacaccctccactccgggggacacacaacccaatacccctgcacctgctccacctgct
gaggatgggataaaaatagaggagaatagcctcaaagaagaagagagtgtagaaggagaa
aaggaggttaaatctacagctccggaggccactgttgagtgtacacaaccccctgcccct
gcctcagaggatgaaaaagtccttgttgaacctcctgaggttgaggagaaagtagaaaag
gcggaggtgaaggagagaacagaggaaccaatggagacagagcccaaaggtgttgctgac
gtggagaaggtagaagagaagtcagcagtagatctgacccccattgtggtagaggacaaa
gaagagaaaaaagaagaagaagagaaaaaagaggtgatgcttcagaatggagagaccccc
aaggacctgaatgatgagaagcagaaaaaaaatatcaaacaacgtttcatgttcaatatt
gcagatggtggttttactgagttgcactccctttggcagaatgaggagcgggcagccaca
gtcactaagaagacttacgagatttggcatcggcggcacgactactggctgctggctggc
atcataaaccatggctatgcccggtggcaggacatccagaatgacccacgctatgccatc
ctcaatgaacctttcaagggtgaaatgaatcgtggcaatttcttagagatcaagaataag
tttctagcccgaaggttcaagctcttagaacaagccctggtgattgaggaacagctgcgt
cgggcagcttacctgaacatgtcagaagacccctcccacccttccatggccctaaacacg
cgctttgctgaggtggagtgtttggcggagagtcaccagcacttgtccaaggagtcaatg
gcaggaaacaagccagccaatgcggtcctgcacaaaggtattctgaaacagctagaagaa
ctgctgagtgacatgaaagctgatgtgactcgactcccagccactattgcccggattccc
ccagttgctgtgaggctacagatgtcagagcgtaacattctcagccgcctggcaaaccga
gcacctgaacctactccacagcaggtagcccagcagcagtga
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integrated database retrieval system
