Canis lupus dingo (dingo): 112676552
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Entry
112676552 CDS
T08371
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud05014
Amyotrophic lateral sclerosis
clud05017
Spinocerebellar ataxia
clud05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112676552 (ATXN2)
05017 Spinocerebellar ataxia
112676552 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
112676552 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112676552 (ATXN2)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112676552 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
112676552
NCBI-ProteinID:
XP_025329747
Ensembl:
ENSCAFG00020017041
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All DBs
Position
26:complement(9404883..9520102)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSLKPQQQQQQQPPQQPQPPSAAASARKPGGSGGLLTSPAAAPPPSSVSSSSAVASSSAA
AAAAASAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGI
YEGVFKTYSPKCDLVLDAAHEKSVESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAR
RDAFTDSAISAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSNGWDPNDMFRYNEENY
GVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEE
KYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRST
SHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPP
SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF
VSHTPPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNNPGGPVLAS
PQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPN
ETSPSFSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSR
DLLKDKIEPNAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSS
PGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMV
GHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQR
QEQHHQSAMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYS
PVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTG
SLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP
QQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVP
QAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQA
HHQQQL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagcctcagcaacagcagcagcagcagccgccgcagcagccgcagccgccg
tccgcggccgccagtgctcgtaagcccggcggcagcggcggccttctcacgtcgcccgcc
gccgcgccgccgccgtcctcggtctcgtcctcctcggcagtggcttcctcctcggcggcg
gcggcggcggcggcgagcgcaggcggcgggcggcccggcctgggcagaggtcgaaacagc
aaaggactgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggtt
catatacttacatcagtcgttggatccaaatgtgaagtacaagtgaaaaacggaggcata
tatgaaggagtttttaaaacatacagtcctaagtgtgatttggtacttgatgctgcacat
gagaaaagtgtggaatccagttcggggccaaaacgtgaagaaataatggagagtattttg
ttcaagtgttcagactttgttgtggtacagtttaaagatatggactccagttatgcaaga
agagatgcttttactgactctgctatcagtgctaaagtaaatggtgaacacaaagaaaag
gacctggagccttgggatgcaggtgaactcactaccagtgaggaactggaagctttggaa
aatgatgtatctaatggatgggatcccaatgatatgtttcggtataatgaagaaaattat
ggtgtagtgtctacatatgatagcagtttatcttcatatacggtacccttagaaagggat
aactcagaagaatttttaaaacgagaagccagggcaaaccagttagcagaagaaattgaa
tcaagtgcccagtacaaagcccgggtggccctggaaaatgatgataggagtgaagaagaa
aaatacacagccgttcagagaaattccagtgaacgtgagggccacagcataaacactagg
gaaaataaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtggg
agacagaattcaccacgtatgggccagcctggatcgggctccatgccatcaagatccacc
tctcacacttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggt
gttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtca
ggtcccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccc
tcgcggccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctct
actatgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcga
caccctcgaaatcacagagtttctgctgggaggggttccatttccagtggcctagaattt
gtatcccataccccaccaagtgaagcagctgctcctccagcagcaaggactagtcccgca
gggggcacatggtcatcagtggtcagcggggttccaagattatcccctaaaactcacaga
cccaggtctcccagacagaacagtattggaaataatcctggtgggcctgttcttgcttct
cctcaagctggtattattccagctgaagctgttgctatgcctgttccagctgcatctcct
acgcctgccagtcctgcatccaacagagctgttaccccatcgattgaggctaaagattcc
aggcttcaagatcagaggcagaactctcctgcagggaataaagaaaatatgaagcccaat
gagacatcacctagcttctcaaagactgaaaataaaggtatatcaccaattgtttctgaa
catagaaaacagattgatgacttaaagaagtttaagaatgattttaggttacagccaagt
tctacttctgaatctatggatcaactgctaaacaaaaatagagagggagaaaaatcaaga
gatttgctcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagtagc
agcaattgcaccagtggcagcagcaaaccgaacagtcccagcatttccccttcaatcctc
agtaatacggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagt
cctggatgtaaacaagagaaagatgataaagaagagaagaaagatgcagctgagcaagtg
agaaagtcaactttgaatcctaatgcaaaggagttcaaccctcgttccttttctcagcca
aagccttctaccaccccaacttcacctcgtcctcaagcacaacctagcccatctatggtg
ggccatcagcagccagctccagtttatactcagcctgtttgttttgcaccaaatatgatg
tatccagtcccagtgagcccaggcgtgcaacctttataccctatacctatgacgcccatg
ccagtgaatcaagccaagacatatagagcaggtaaagtaccaaatatgccccaacagcgg
caagagcagcatcatcagagcgccatgatgcaccctgcctcagcagcaggcccgccgatt
gtggccaccccaccagcttattccacacagtacgttgcctatagtcctcagcagtttcca
aatcagcctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagt
cctgtaatacagggtaatgctagaatgatggcaccgccagcacatgcccagcctggttta
gtgtcttcttcagcaactcagtacggggctcatgagcagacacatgcgatgtatgcatgt
cccaaattaccatacaacaaggagacaagcccttctttctactttgccatttccactggc
tcccttgctcagcagtatgcgcaccctaatgctaccctgcacccacatactccacatcct
cagccttcagctacccccaccggacagcagcaaagccaacatggtggaagtcatcctgca
cccagtcctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtcca
cagcagcagtcagccatttaccacgcggggcttgcaccaaccccaccttccatgacccct
gcctccaatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtctttaca
atccatccttctcatgttcagccggcatacaccaatcctccccacatggcccacgtacct
caggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatg
ctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacag
cccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcagtacaagcc
caccaccaacagcagttgtaa
DBGET
integrated database retrieval system