KEGG   Canis lupus dingo (dingo): 112676552
Entry
112676552         CDS       T08371                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud05014  Amyotrophic lateral sclerosis
clud05017  Spinocerebellar ataxia
clud05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:clud00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    112676552 (ATXN2)
   05017 Spinocerebellar ataxia
    112676552 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    112676552 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clud03019]
    112676552 (ATXN2)
Messenger RNA biogenesis [BR:clud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112676552 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 112676552
NCBI-ProteinID: XP_025329747
Ensembl: ENSCAFG00020017041
LinkDB
Position
26:complement(9404883..9520102)
AA seq 1146 aa
MSLKPQQQQQQQPPQQPQPPSAAASARKPGGSGGLLTSPAAAPPPSSVSSSSAVASSSAA
AAAAASAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGI
YEGVFKTYSPKCDLVLDAAHEKSVESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAR
RDAFTDSAISAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSNGWDPNDMFRYNEENY
GVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEE
KYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRST
SHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPP
SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF
VSHTPPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNNPGGPVLAS
PQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPN
ETSPSFSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSR
DLLKDKIEPNAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSS
PGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMV
GHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQR
QEQHHQSAMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYS
PVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTG
SLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP
QQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVP
QAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQA
HHQQQL
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgtcgctgaagcctcagcaacagcagcagcagcagccgccgcagcagccgcagccgccg
tccgcggccgccagtgctcgtaagcccggcggcagcggcggccttctcacgtcgcccgcc
gccgcgccgccgccgtcctcggtctcgtcctcctcggcagtggcttcctcctcggcggcg
gcggcggcggcggcgagcgcaggcggcgggcggcccggcctgggcagaggtcgaaacagc
aaaggactgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggtt
catatacttacatcagtcgttggatccaaatgtgaagtacaagtgaaaaacggaggcata
tatgaaggagtttttaaaacatacagtcctaagtgtgatttggtacttgatgctgcacat
gagaaaagtgtggaatccagttcggggccaaaacgtgaagaaataatggagagtattttg
ttcaagtgttcagactttgttgtggtacagtttaaagatatggactccagttatgcaaga
agagatgcttttactgactctgctatcagtgctaaagtaaatggtgaacacaaagaaaag
gacctggagccttgggatgcaggtgaactcactaccagtgaggaactggaagctttggaa
aatgatgtatctaatggatgggatcccaatgatatgtttcggtataatgaagaaaattat
ggtgtagtgtctacatatgatagcagtttatcttcatatacggtacccttagaaagggat
aactcagaagaatttttaaaacgagaagccagggcaaaccagttagcagaagaaattgaa
tcaagtgcccagtacaaagcccgggtggccctggaaaatgatgataggagtgaagaagaa
aaatacacagccgttcagagaaattccagtgaacgtgagggccacagcataaacactagg
gaaaataaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtggg
agacagaattcaccacgtatgggccagcctggatcgggctccatgccatcaagatccacc
tctcacacttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggt
gttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtca
ggtcccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccc
tcgcggccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctct
actatgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcga
caccctcgaaatcacagagtttctgctgggaggggttccatttccagtggcctagaattt
gtatcccataccccaccaagtgaagcagctgctcctccagcagcaaggactagtcccgca
gggggcacatggtcatcagtggtcagcggggttccaagattatcccctaaaactcacaga
cccaggtctcccagacagaacagtattggaaataatcctggtgggcctgttcttgcttct
cctcaagctggtattattccagctgaagctgttgctatgcctgttccagctgcatctcct
acgcctgccagtcctgcatccaacagagctgttaccccatcgattgaggctaaagattcc
aggcttcaagatcagaggcagaactctcctgcagggaataaagaaaatatgaagcccaat
gagacatcacctagcttctcaaagactgaaaataaaggtatatcaccaattgtttctgaa
catagaaaacagattgatgacttaaagaagtttaagaatgattttaggttacagccaagt
tctacttctgaatctatggatcaactgctaaacaaaaatagagagggagaaaaatcaaga
gatttgctcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagtagc
agcaattgcaccagtggcagcagcaaaccgaacagtcccagcatttccccttcaatcctc
agtaatacggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagt
cctggatgtaaacaagagaaagatgataaagaagagaagaaagatgcagctgagcaagtg
agaaagtcaactttgaatcctaatgcaaaggagttcaaccctcgttccttttctcagcca
aagccttctaccaccccaacttcacctcgtcctcaagcacaacctagcccatctatggtg
ggccatcagcagccagctccagtttatactcagcctgtttgttttgcaccaaatatgatg
tatccagtcccagtgagcccaggcgtgcaacctttataccctatacctatgacgcccatg
ccagtgaatcaagccaagacatatagagcaggtaaagtaccaaatatgccccaacagcgg
caagagcagcatcatcagagcgccatgatgcaccctgcctcagcagcaggcccgccgatt
gtggccaccccaccagcttattccacacagtacgttgcctatagtcctcagcagtttcca
aatcagcctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagt
cctgtaatacagggtaatgctagaatgatggcaccgccagcacatgcccagcctggttta
gtgtcttcttcagcaactcagtacggggctcatgagcagacacatgcgatgtatgcatgt
cccaaattaccatacaacaaggagacaagcccttctttctactttgccatttccactggc
tcccttgctcagcagtatgcgcaccctaatgctaccctgcacccacatactccacatcct
cagccttcagctacccccaccggacagcagcaaagccaacatggtggaagtcatcctgca
cccagtcctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtcca
cagcagcagtcagccatttaccacgcggggcttgcaccaaccccaccttccatgacccct
gcctccaatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtctttaca
atccatccttctcatgttcagccggcatacaccaatcctccccacatggcccacgtacct
caggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatg
ctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacag
cccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcagtacaagcc
caccaccaacagcagttgtaa

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