Canis lupus dingo (dingo): 112677164
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Entry
112677164 CDS
T08371
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112677164 (RC3H2)
04121 Ubiquitin system [BR:
clud04121
]
112677164 (RC3H2)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
112677164 (RC3H2)
Ubiquitin system [BR:
clud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112677164 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112677164
NCBI-ProteinID:
XP_025330827
Ensembl:
ENSCAFG00020015288
UniProt:
A0A8C0R1R9
LinkDB
All DBs
Position
9:61149630..61210948
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENNVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAE
SVTENKIGSPPKTPVSNVVATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTSVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKTPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSAYGNEATS
SAHYIERDRFIVTDISGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLSLNLLSKEIELRNGESDYTEDASDTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSIGNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtccttcctgtcaactttgcactcctccagttagtgggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttgaaaccactaagtggaggtaaaggtgtagctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgacgcttgtaaactgt
caactggtggaggaagaaggtcgtgtaagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactaatattacagcaccagaatccccagcaattgtctgccaacctg
tgggctgctgtcagggctcgaggatgccagtttctaggaccagctatgcaagaagaggcc
ttaaagctggtgttgctagcattagaagatggttctgctctctcaaggaaagtactggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcatgttttaaggttaccaaaagggatgaagac
tcttccttgatgcagctaaaggaggaatttaggagttacgaagcattacgcagagaacat
gatgcccaaattgttcatattgcaatggaagcaggactccgcatttcacctgagcagtgg
tcctcacttctgtatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagaacttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagcctaacagcaaatacaagactagcatgtgccgagacctgcgt
caacaaggaggatgtccccgaggaacaaactgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacaatgtttcccagctaatcccacgtagtactgacagtacgttaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaatgctactgggccttctgcagag
tctgtcactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagtggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcattctgaaaatattcagtattttcaa
gatccaaggactcagataccctttgaagttccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttctatgccatatgctgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtttatcagacgtctttgcgggaaagatataactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaagtgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaaacacctcttgtctcttcaactcttcctgtggca
acacagtcgccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gagagtgtgagtggtacaaaatttgaagaagatcatctttctcattattctccctggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct
aattcaaatgctgtattaatggatctggacagtggagatgttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagacccaataattccatttagtgatggacct
atcatctcaaaatggggtgcaatttccagatcttcacgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgccactaagcctatcagtgtatcagattat
gttccttatgtcaatgctgttgattcaaggtggagtgcatatggtaacgaggccacatca
tcagcacactatattgaacgggacagattcattgttaccgatatatctggtcatcgaaag
cattccagtactggagacctcttgagcattgaacttcagcaggccaagagtaactcattg
cttcttcaaagggaggccaatgctctggccatgcagcagaagtggaattccctggatgaa
ggccgtcacctttccttaaatcttctaagcaaagaaattgaactgagaaatggagagagt
gattacacagaagatgcaagcgatactaagcctgatagggatattgagttagagctttcg
gcacttgatactgatgaacctgatggacaaggggaacaaattgaagagatcctggacata
cagcttggtatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaatggg
cacccagtccagcagcaccaaaaggagccgctggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtccattggcaatgcaagttgtctccccatcaccacatccgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
