KEGG   Canis lupus dingo (dingo): 112677388
Entry
112677388         CDS       T08371                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
clud  Canis lupus dingo (dingo)
Pathway
clud03320  PPAR signaling pathway
clud04148  Efferocytosis
clud04151  PI3K-Akt signaling pathway
clud04659  Th17 cell differentiation
clud04919  Thyroid hormone signaling pathway
clud04920  Adipocytokine signaling pathway
clud04928  Parathyroid hormone synthesis, secretion and action
clud04932  Non-alcoholic fatty liver disease
clud04976  Bile secretion
clud05160  Hepatitis C
clud05200  Pathways in cancer
clud05202  Transcriptional misregulation in cancer
clud05207  Chemical carcinogenesis - receptor activation
clud05216  Thyroid cancer
clud05222  Small cell lung cancer
clud05223  Non-small cell lung cancer
clud05226  Gastric cancer
clud05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:clud00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    112677388 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    112677388 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    112677388 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    112677388 (RXRA)
   03320 PPAR signaling pathway
    112677388 (RXRA)
   04919 Thyroid hormone signaling pathway
    112677388 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    112677388 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    112677388 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    112677388 (RXRA)
   05202 Transcriptional misregulation in cancer
    112677388 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    112677388 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    112677388 (RXRA)
   05216 Thyroid cancer
    112677388 (RXRA)
   05222 Small cell lung cancer
    112677388 (RXRA)
   05223 Non-small cell lung cancer
    112677388 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    112677388 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    112677388 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    112677388 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clud03000]
    112677388 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:clud03310]
    112677388 (RXRA)
Transcription factors [BR:clud03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    112677388 (RXRA)
Nuclear receptors [BR:clud03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   112677388 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 112677388
NCBI-ProteinID: XP_025331447
Ensembl: ENSCAFG00020024843
LinkDB
Position
9:51726667..51820417
AA seq 439 aa
MAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYVDANMGLNPNSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKSELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctcgctgcacccctctctggggcctggcatcggctcctcgcttggctcc
ccgggacagctgcactcgcccatcagcacgctgagctcccccatcaacggcatgggccca
cccttctcggtcatcagctcccccatgggcccccactccatgtcggtgcctaccacgccc
accctgggcttcggcaccggcagcccccagctcagctcccccatgaaccccgtcagcagc
agcgaggacatcaagccgccgctgggcctcaatggtgtcctcaaggtcccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgccatctgtggggaccgctcctca
ggcaagcactacggagtgtatagctgtgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgcgacaacaaggactgcctgatcgacaagcggcag
cgcaaccgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgggaa
gccgtgcaggaggagcggcagcggggcaaggaccggaacgagaatgaggtggaatccacg
agcagcgccaacgaggacatgccagtggagaagattctggaggcggagctggctgtggag
cccaagactgagacgtacgtggacgcgaacatggggctgaaccccaattcgcccaacgac
cccgtcaccaacatctgccaggctgcggacaagcagctcttcactctggtcgagtgggcc
aagcggatcccgcatttctctgagctgcccctggacgaccaggtcatcctgctcagggca
ggctggaatgagctgctcatcgcctccttctcccaccggtccatcgccgtgaaggacggg
atccttctggccaccggactgcacgtccaccggaacagtgcccacagcgcgggggtgggc
gccatcttcgacagggtgctgacagagctcgtgtccaagatgcgggacatgcagatggac
aagtcggagctgggctgcctgcgtgccattgtcctcttcaacccggactccaaggggctc
tcgaacccggcagaggtggaggcactgcgggagaaggtctacgcgtccctggaggcgtat
tgcaaacataagtaccccgagcagccaggaaggtttgccaagctgctgctccgcctgccg
gccctgcgctctattggcctcaagtgcctggaacatctcttcttcttcaaactcatcgga
gacacgcccatcgacaccttcctcatggagatgctggaagccccccaccagatgacttag

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