Canis lupus dingo (dingo): 112677575
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Entry
112677575 CDS
T08371
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112677575 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clud03041
]
112677575 (PRPF8)
Spliceosome [BR:
clud03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112677575 (PRPF8)
Complex C
U5 SnRNP specific factors
112677575 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
112677575
NCBI-ProteinID:
XP_025331941
Ensembl:
ENSCAFG00020009943
LinkDB
All DBs
Position
9:complement(46994678..47023920)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcccca
ttgccggactacatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcagaaaagcgaaagtttggatttgtggatgctcagaaagaagac
atgcccccagaacacgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtttacttgggtgccctgaaatacatgccccatgcagtcctc
aaactgctggagaacatgcctatgccttgggagcagattcgggatgtacctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacagaaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aatatcttggatgttgaaccactggaggccattcagctagagctggaccctgaagaggat
gctcctgtgttggactggttttatgaccaccagccattgagggatagtcggaagtacgtg
aatggttccacttaccagcgctggcagttcacactgcccatgatgtccactctataccgc
ttggccaatcagctcctgacagacttggtagatgataactacttctatctctttgatctg
aaagccttcttcacgtccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctccaggatgaagactggaatgaattcaacgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgcttttccctatctgtac
aacaaccttccacaccatgtccaccttacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cacaggcactctgtcaagagccaggaaccattacctgatgatgacgaggagtttgaactc
ccagagtttgtggagcccttcctgaaggacacacccctttacacagacaatacagccaat
ggcattgccctgctctgggccccaaggcccttcaacctacgctctggtcgtacccgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcaacct
gtgaaagtgagggtctcctaccagaaacttcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagaggtacctgtttcgttccttcaaagctaccaaa
ttctttcagtccacaaagctggactgggtagaggtggggcttcaggtttgccgccagggc
tacaacatgctcaaccttcttattcaccgaaaaaacctcaactatctgcatctggattat
aacttcaatcttaagcctgtcaagaccctcactaccaaggaaagaaagaaatctcgtttt
ggaaatgctttccatctgtgtcgagaagttctgcgtttaaccaagttggtggtggacagt
catgtgcagtatcgcttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcccatgtggggcaactgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaatacgggccct
gtaggaaagggccctggctgtggcttctgggctgctggctggcgagtctggctgtttttc
atgcgtggcatcacccctttgctggagcggtggctgggcaacctcctggcccgacagttt
gaaggccgacactccaagggggtggcaaagactgtaacaaagcagcgagtggaatcgcat
tttgacctggagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
atcaaacagaacaaggcccggacgatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaatattccctggaaggtacctgggctgccaacacccatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggaccaacactgcccactataaccgagaacga
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctggggcgcctcact
cggctctatctcaaggcagaacaggagcgacagcacaactacctgaaggatgggccatac
atcacagcagaggaagcggtggcagtgtataccaccactgtgcattggttggagagccgg
aggttttcacccatcccatttcccccactctcctacaagcatgacaccaaattgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaagagctaggtctgatcgagcaagcctatgacaatccccatgaggcactgtcacgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctttatagccacctggtgccagtatatgatgtagagccactggagaagatcactgatgcc
tacctggaccagtacctttggtatgaagctgacaagcgccgccttttcccaccctggatc
aagcctgccgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaagatgtgtgggagacaagtgagggcgagtgcaatgtcatgctggaatcacgc
tttgagaagatgtatgaaaagattgacttgaccctgcttaataggctgctgcgactcatt
gtagaccacaacatagctgactacatgacagccaagaacaatgtcgtcatcaactataag
gacatgaaccatacaaattcctacgggatcattagaggcctgcaatttgcctcattcatt
gtgcagtactatggtttggtgatggatttgctggtgttgggactgcaccgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcccaccccatccgtctcttctgcagatacatcgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacttgatccagcgttacctgacagagcatcctgacccg
aacaatgaaaatatcgttggctataataacaagaagtgctggccccgagatgcgcgcatg
cgcctcatgaaacatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactacagttcagtgggagaacagtttcgtgtctgtgtacagtaag
gataaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctacctaaatgc
cgcaccagctatgaggaattcacccacaaggatggggtgtggaacctgcagaatgaggtt
actaaagagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctctactaccttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacgtactttcgagaggctgtggtgaac
acccaggagctcctggacttgctagtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaactccaagatgcccagtcggttccctcccgttgtgttctatacccctaag
gaattgggtggacttggcatgctctcaatgggacatgtgctcattccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gattctcagcgagtgtgggctgagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaagattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacattggcttatgataagggctggcgtgttcgaact
gactttaagcagtatcaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacggacatgatccaggccctgggtggt
gtagaaggcattctagaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcctaatcgtaggttcaccctctggtggtcccca
accatcaaccgggccaatgtgtatgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcatggcaagattcccacactgaagatctctcttatccagatcttccgagctcac
ttatggcagaagatccacgagagcattgtgatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagaccattcaccctcggaagtcctat
aagatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcgttgctggcagactccaaggatgtgatggatagtaccactactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccatgacattgaacgctatgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcacccactggt
gtgctcattgccattgacctggcctataacctgcacagtgcctatggaaactggttcccg
ggcagcaagcctctcatacagcaggccatggccaaaatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaattatggggagctcttctccaaccagattatctggtttgtg
gatgatactaatgtctacagagtgactatccataagacctttgaagggaacttgacgacc
aaacccatcaatggggccatcttcatcttcaatccacgcacagggcagctgttcctcaag
ataatccacacatccgtgtgggctggacagaagcgtttggggcagctggctaagtggaag
acagctgaggaagtggctgccctgatccgatctctgcctgtagaggagcagcccaagcag
atcattgttactaggaagggcatgctggacccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctccaactacctttccaggcttgtctcaaggtggaa
aagtttggagacctcatccttaaagccactgaaccccagatggttctctttaatctctat
gatgactggctcaagactatctcatcttacacggctttctcccgtctcatcctgattttg
cgtgctcttcatgttaacaatgaccgagcaaaggtgatcctgaagccagacaagactacc
attacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaagatcttatcttggccgactatggcaagaaaaacaacgtcaatgtggca
tcactgacacagtcagaaattcgagacatcatcttgggtatggagatctcggcaccatca
cagcagcggcagcagatagcagagattgagaagcagaccaaggaacagtcacagctgaca
gcaacgcagactcgcactgtcaacaagcatggcgatgagatcattacttctaccaccagc
aactatgagacccagactttctcgtctaagactgaatggagggttagggccatctctgct
gccaaccttcacctaaggaccaatcatatctacgtgtcctctgatgacatcaaggagacc
ggttatacctatatccttcctaagaatgtgcttaagaagtttatttgcatatctgacctt
cgggcccaaattgcaggatacctgtatggagtgagtccaccagataacccccaggtgaag
gagatccgctgcattgtgatggtaccacagtggggcactcaccaaaccgtgcacctgcct
ggccagctgccccagcacgagtacctcaaggagatggaacccttaggatggatccacact
cagcccaacgagtccccccagctatcaccccaagatgtcaccactcatgctaagatcatg
gctgataacccatcctgggatggtgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcacattgacagcctataagctgacccccagtggctatgaatggggtcgccag
aacacagataagggcaacaatcccaagggctatctaccctcacattacgagagggtccag
atgctgctgtcagatcgcttccttggcttttttatggtccctgcccagtcctcatggaac
tacaattttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtgcacagaccttcccacttcctcaacttcgctctcttg
caagagggtgaggtctactctgcggaccgagaagacctctatgcctag
DBGET
integrated database retrieval system
