Corynebacterium lujinxingii: IAU68_03895
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Entry
IAU68_03895 CDS
T07743
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cluj
Corynebacterium lujinxingii
Pathway
cluj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cluj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IAU68_03895 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cluj03400
]
IAU68_03895 (mfd)
Enzymes [BR:
cluj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IAU68_03895 (mfd)
DNA repair and recombination proteins [BR:
cluj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
IAU68_03895 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
CbiX
AAA_22
MFD_D3
AAA_16
RecG_dom3_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QNP90917
UniProt:
A0A7H0K0V1
LinkDB
All DBs
Position
777831..781451
Genome browser
AA seq
1206 aa
AA seq
DB search
MTETTPPVLGGLLTQALTDPKLKGLVTHVGEDSLHITGIDQARSWAVGAIAREAPVLLVT
ATGHEAEDLSAELKAMLGDDHVAQFPAYETLPHERLSPAADIVGRRAKVLWEMPRVIVAA
ARAVCQPVLPANEPIRVAVGQEHDFEDLTEQLVHFAYNHVDMVAGRGEFATRGGIIDVFP
TTADNPVRIEFWGDEVTDIRSFAVADQRTIDDVKQVDLFPARQLLIDDSVAAKADDLARK
FPSNPTLSSLLARISEKQPADGMEALIPALTDKQYSVLPELMPAGSVVLVTNPEKVRARI
EDLEATDREFLEAGWEAAAMGAEGPVVVEGLDVSASSYRTYESLEISASKAGSAWWTFAP
PGMFTADDAETLPLEFEPAPAPKGDPKAIEQLYATLKLHVTQNHGKAAFVAPAKGTIDRM
AERLREHGISARVATPGLEPVDGAVTLYQALSHAGLVFSGPNLVVVTETDLTGNRVGDIA
GAKRRAPRRRNRVDPLALQPGDFVVHDTHGIGKFVKMAERTVKAGDEDSRREYIVLEYQP
AKRGQPGDQLWVPMESLDLLSKYTGGEKPSLSKMGGSDWKSTKRKARAAVREIAGELVEL
YAKRQAAPGHAFAPDTPWQHEMEDAFPFVETEDQLTAIEAVKEDMEKPTPMDRVIVGDVG
FGKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHFSTFDQRMDGFGVEIRELSRFTSAAD
SKKIMAGLADGSIDIVIGTHRLLQTGVQWKNLGLIIVDEEQRFGVEHKEHIKALKSHVDV
LTMTATPIPRTLEMSLTGIREMTSITTAPEDRHPVLTYVGPQEDKQVAAAIRRELLRDGQ
VFYIHNKVSDIEKTARQLRELVPEARVVVAHGQMSEQVLEQTVQGFWNREYDVMVCTTIV
ETGLDIANANTLIVENAQNMGLSQLHQLRGRVGRSRERAYAYFLYPKDKTLTETSYDRLA
TIAQNNDLGAGMAVAQKDLEMRGAGNVLGAEQSGHIAGVGFDMYVRLVSEAVETFKGLMS
GEPVDATDKGPKEIRVDLPVDAHIPETYINSERLRLEVYRKLAEARDDDALAAAADDMVD
RFGALPTEVQHLMAVARLRNQARAVGVSDILTQGTRIKLHPVELPDSKQVRLKRLYPGAN
FRAAAKALQVPMPRESKAINSPNLRDMELLQWVADLLADMLDAPKISVAGSTVADEPKKK
VFSVSE
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccacccctcctgtcctcggcggtctgctcacgcaggcgctgacggatccg
aaactcaagggtctggtcacgcacgtgggcgaggattcgctgcacatcaccggcattgac
caggcgcgttcctgggccgtcggggcgattgcgcgggaggcgccggtgctgttggtcact
gcgaccgggcacgaggcggaggatctgtcagccgaactcaaggcgatgcttggcgacgac
cacgtcgcgcagttccccgcctacgaaaccctgccgcatgagcggttgtcgccggctgcg
gacatcgtcggcaggcgtgcgaaggtgctgtgggagatgccgcgcgtgatcgtcgccgcg
gcgcgtgccgtgtgtcagccggtgctgccggcgaacgagccgatccgggttgcggtgggc
caggagcacgattttgaggacctgaccgagcagctggtccacttcgcctacaaccacgtg
gacatggtggcaggccgcggtgagttcgccacgcgcggcggcatcatcgacgtctttccg
accaccgcggataatccggtgcgcatcgagttctggggcgatgaggtcaccgatatccgc
tcgttcgccgtcgccgaccagcgcaccatcgacgacgtgaaacaggtcgatcttttccct
gcgaggcagttgcttatcgacgactccgttgccgccaaagccgacgacctggcccgcaaa
ttcccgtcgaacccgacgctgtcgtcgctgcttgcgcgcatctcggagaagcaaccggcc
gacggcatggaagcgctcatcccggcgctgacggacaagcagtattcggtgctgccggag
ctcatgccggcaggttcggtggtgctggtaaccaacccggaaaaggtccgtgcccgcatc
gaggatctggaggcgaccgaccgggagttcctcgaggccggctgggaggccgctgcgatg
ggtgctgaaggccccgtcgtggtggagggcctggacgtgtccgcctcgtcgtaccgcacc
tacgagtcgttggagatctccgcgtcgaaggcgggcagcgcgtggtggacgttcgcgccg
cccggcatgttcaccgccgatgacgcggagacactgccgctggagtttgagcccgcgccc
gcgccgaagggggacccgaaggccatcgagcaactctacgccacactcaaactgcacgtc
acgcaaaaccatggcaaggccgcgtttgtggcgccggcgaagggcacgatcgaccgcatg
gcggagcgcctgcgtgagcacgggatttccgcacgtgtggccactccgggtcttgagcct
gtcgacggcgcggtgacgctctaccaggcgctgtcgcacgcggggctggtttttagcggc
ccgaacctggtcgtggtcacggagacggatctgaccggcaaccgcgtcggtgacatcgcc
ggtgcgaaacgccgcgcaccccgccgccgcaaccgggtcgatccgttagcgctgcagccg
ggggacttcgtggtgcacgacacgcacggcatcggcaagtttgtgaagatggcggagcgc
accgtcaaggccggcgacgaggattcgcgtcgcgagtacatcgtgctcgagtaccagccg
gccaagcgcggccagcccggcgaccagctgtgggtgccgatggagtcgcttgacctgctg
agcaagtacaccgggggcgagaagccgtcgttaagcaaaatgggcggctccgactggaag
tcgacgaagcgtaaggcgcgcgccgcggtgcgcgagatcgctggcgaactcgttgagctc
tacgccaagcgccaggccgcgccgggccacgcgttcgcgccggataccccgtggcagcac
gagatggaagacgcctttccgtttgtggagacggaagaccagctcaccgccatcgaggcc
gtcaaggaagacatggaaaagcccacgccgatggatcgcgtgatcgtcggcgacgtgggc
tttggtaagactgaggtcgccgtgcgcgcggcgttcaaggctgtccaggacggcaagcag
gttgcggtgctcgtgccgacgaccctgctcgcccagcagcacttctccacgttcgaccag
cgtatggacggcttcggggtggaaatccgtgagctgtctcgctttacctccgcggccgat
tccaagaagatcatggcggggctggcggacggctccatcgacatcgtcatcggcacccac
cgcctgctgcagacgggcgtgcagtggaagaacttaggcctgatcattgtcgacgaggag
cagcgcttcggtgtcgagcacaaggagcacatcaaggcgctgaagtcgcatgtggacgtg
ctcaccatgaccgcaaccccgattccgcgcacgctcgagatgtcactgaccggcatccgc
gagatgacctcgatcaccaccgcgcccgaagaccgccacccggtgctgacgtacgtcgga
ccgcaggaggacaagcaggtcgccgccgcgatccgccgcgagctgcttcgcgacggccag
gtgttctacatccacaacaaggtctccgacattgaaaaaactgcccgccaactgcgcgag
ctggtgccggaagcgcgcgtcgtcgtcgcgcacggccagatgagcgagcaggtcctcgag
cagacggtgcagggcttctggaaccgcgagtacgacgtcatggtgtgcacgacgatcgtg
gaaaccggtttggacatcgccaacgccaacacgcttatcgtggaaaacgcgcaaaacatg
ggcctgtcgcagctgcaccagctgcgcggccgcgtgggacgttcccgcgagcgcgcctac
gcctacttcctgtacccgaaggacaaaacgctcaccgagacctcctacgaccgcctggcc
accatcgcccagaacaacgatctgggcgccggcatggcggtggcgcagaaggacttggag
atgcgcggcgccggcaacgtgctgggcgcggagcagtccggccacatcgccggtgtgggt
ttcgacatgtacgtgcgcctcgtaagcgaggccgtggagacttttaagggcctgatgagc
ggcgagcctgtcgacgccaccgacaagggcccgaaggaaatccgcgtcgacctgcccgtc
gacgcgcacatcccagagacgtacatcaactccgagcgcctgcgtctggaggtctaccgc
aagctcgcagaagcgcgtgacgacgacgccctggccgccgcagccgacgacatggtcgac
cgtttcggcgccctgccgaccgaggtccagcacctcatggccgtggcgcgtttgcgaaac
caagcccgcgcggtgggggtttccgacatactcacccaaggcacccgcatcaagctgcac
ccggtggagctgccggattcaaagcaggtgcgtctgaagcggctctacccgggcgcgaac
ttccgcgccgcggcgaaggcgctgcaggtgccgatgccgcgcgagtcgaaggcgatcaac
agcccaaacttgcgcgacatggaactgctgcagtgggtcgcggaccttctggcggacatg
ctggacgccccgaaaatctccgttgcgggatccacggtggccgacgaaccgaagaaaaag
gtcttctccgttagcgagtag
DBGET
integrated database retrieval system
